You are here

CBS51388_004904-T1, CBS51388_004904-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004904-T1
Unique NameCBS51388_004904-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:2250085..2252061+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004904-T1 ID=CBS51388_004904-T1|Name=CBS51388_004904-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1977bp|location=Sequence derived from alignment at An07:2250085..2252061+ (Aspergillus niger CBS 513.88)
ATGGCCCCCGCTGTTGGTATCGATTTGGGAACCACCTACTCCTGTGTGGG TGTCTTCCGTGATGACCGCATTGAAATCATCGCCAACGACCAGGGTAACC GCACTACCCCCTCTTTCGTGGCTTTCACCGACACCGAGCGTCTCATCGGT GATGCCGCCAAGAACCAGGTCGCCATGAACCCTCACAACACCGTCTTCGA TGCTAAGCGTCTGATCGGTCGTCGTTTTGCCGACGCTGAGGTCCAGTCCG ACATGAAGCACTGGCCCTTCAAGGTTGTCGAGAAGGGTGGCAAGCCCATC GTCGAGGTTGAGTTCAAGGGCGAGACCAAGCAGTTCACCCCCGAGGAGGT CTCCTCCATGATCCTCACCAAGATGCGTGAGACCGCTGAGGCCTACCTCG GTGGCACCGTCAACAACGCTGTCATCACTGTCCCCGCCTACTTCAACGAC TCTCAGCGTCAGGCCACCAAGGATGCTGGTCTCATTGCCGGCCTGAACGT TCTCCGTATCATCAACGAGCCCACCGCTGCTGCCATTGCCTACGGTCTGG ACAAGAAGCCGAGGGTGAGCGCAACGTCCTCATCTTCGATCTTGGTGGTG GTACCTTCGATGTCTCCCTCCTGACCATCGAGGAAGGTATCTTCGAGGTC AAGGCCACCGCTGTGACACTCACTTGGGTGGTGAGGACTTCGACAACCGC CTCGTCAACCACTTCGTCAACGAGTTCAAGCGCAAGCACAAGAAGGACCT CACCTCCAACGCTCGTGCTCTCCGTCGTCTCCGCACCGCTTGCGAGCGTG CCAAGCGTACCCTCTCTTCCGCTGCCCAGACCTCCATTGAGATCGACTCT CTCTTCGAGGGTATCGACTTCTACACCTCCATCACCCGTGCTCGTTTCGA GGAGCTCTGCCAGGACCTCTTCCGTTCCACCATGGAGCCCGTCGAGCGTG TCCTCCGTGACGCCAAGATCGACAAGTCCTCCGTCCACGAGATCGTCCTG GTCGGTGGTTCCACCCGTATCCCCAAGATCCAGCGTCTCGTCAGTGACTT CTTCAACAAGGACGCCAACAAGTCCATCAACCCCGATGAGGCCGTTGCCT ACGGTGCTGCCGTCCAGGCTGCTATCCTGTCTGGTGACACTTCCTCCAAG TCCACCAACGAGATCCTCCTGCTCGACGTTGCCCCTCTCTCCCTCGGTAT CGAGACCGCTGGTGGTGTCATGACTGCTCTCATCAAGCGCAACACCACCA TCCCCACCAAGAAGTCCGAGACCTTCTCCACCTACTCCGACAACCAGCCC GGTGTCTTGATCCAGGTCTACGAGGGTGAGCGTGCCCGTACCAAGGACAA CAACCTGCTCGGCAAGTTCGAGCTCACTGGCATCCCCCCCGCCCCCCGTG GTGTTCCCCAGATTGAGGTCACCTTCGACCTTGATGCCAACGGAATCATG AACGTCTCTGCCATCGAGAAGGGTACCGGCAAGACCAACAAGATCACCAT CACCAACGACAAGGGCCGTCTCTCCAAGGAGGAGATCGAGCGCATGCTTG CTGAGGCCGAAAAGTTCAAGGCTGAGGACGAGGCTGAGGCTTCCCGTATC CAGGCCAAGAACGGTCTCGAGTCCTACGCTTACTCCCTCAAGAACACCAT CAACGAGGGCAAGCTCACCATCAGCGATGAGGACAAGCAGAAGGTCACCG CCAAGGTTGACGAGGTCATCAGCTGGCTCGACAGCAACCAGACCGCCGAG AAGGACGAGTACGAGGCTCAGCAGAAGGAGCTTGAGGGGTATGTTCATTC CTTTTCCCCATCTTAACCATGTTGAATCATGACGCTAACTTTGACTCTTA CAGTGTTGCCAACCCCATCATCTCCGCTGCCTACGGTGGTGCCGCTGGTG CCGCCCCCGGCGGTGCTGCCCCCGGTGCTACCCGCACTGCTGACGAGGTC GAGGAGCGCCCTGAGGAGCTCGACTAA
back to top

Coding sequence (CDS) from alignment at An07:2250085..2252061+

>CBS51388_004904-T1 ID=CBS51388_004904-T1|Name=CBS51388_004904-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5553bp|location=Sequence derived from alignment at An07:2250085..2252061+ (Aspergillus niger CBS 513.88)
ATGGCCCCCGCTGTTGGTATCGATTTGGGAACCACCTACTCCTGTGTGGG
TGTCTTCCGTGATGACCGCATTGAAATCATCGCCAACGACCAGGGTAACC
GCACTACCCCCTCTTTCGTGGCTTTCACCGACACCGAGCGTCTCATCGGT
GATGCCGCCAAGAACCAGGTCGCCATGAACCCTCACAACACCGTCTTCGA
TGCTAAGCGTCTGATCGGTCGTCGTTTTGCCGACGCTGAGGTCCAGTCCG
ACATGAAGCACTGGCCCTTCAAGGTTGTCGAGAAGGGTGGCAAGCCCATC
GTCGAGGTTGAGTTCAAGGGCGAGACCAAGCAGTTCACCCCCGAGGAGGT
CTCCTCCATGATCCTCACCAAGATGCGTGAGACCGCTGAGGCCTACCTCG
GTGGCACCGTCAACAACGCTGTCATCACTGTCCCCGCCTACTTCAACGAC
TCTCAGCGTCAGGCCACCAAGGATGCTGGTCTCATTGCCGGCCTGAACGT
TCTCCGTATCATCAACGAGCCCACCGCTGCTGCCATTGCCTACGGTCTGG
ACAAGAAGCCGAGGGTGAGCGCAACGTATCTTCGAGGTCAAGGCCACCGC
TGTGACACTCACTTGGGTGGTGAGGACTTCGACAACCGCCTCGTCAACCA
CTTCGTCAACGAGTTCAAGCGCAAGCACAAGAAGGACCTCACCTCCAACG
CTCGTGCTCTCCGTCGTCTCCGCACCGCTTGCGAGCGTGCCAAGCGTACC
CTCTCTTCCGCTGCCCAGACCTCCATTGAGATCGACTCTCTCTTCGAGGG
TATCGACTTCTACACCTCCATCACCCGTGCTCGTTTCGAGGAGCTCTGCC
AGGACCTCTTCCGTTCCACCATGGAGCCCGTCGAGCGTGTCCTCCGTGAC
GCCAAGATCGACAAGTCCTCCGTCCACGAGATCGTCCTGGTCGGTGGTTC
CACCCGTATCCCCAAGATCCAGCGTCTCGTCAGTGACTTCTTCAACAAGG
ACGCCAACAAGTCCATCAACCCCGATGAGGCCGTTGCCTACGGTGCTGCC
GTCCAGGCTGCTATCCTGTCTGGTGACACTTCCTCCAAGTCCACCAACGA
GATCCTCCTGCTCGACGTTGCCCCTCTCTCCCTCGGTATCGAGACCGCTG
GTGGTGTCATGACTGCTCTCATCAAGCGCAACACCACCATCCCCACCAAG
AAGTCCGAGACCTTCTCCACCTACTCCGACAACCAGCCCGGTGTCTTGAT
CCAGGTCTACGAGGGTGAGCGTGCCCGTACCAAGGACAACAACCTGCTCG
GCAAGTTCGAGCTCACTGGCATCCCCCCCGCCCCCCGTGGTGTTCCCCAG
ATTGAGGTCACCTTCGACCTTGATGCCAACGGAATCATGAACGTCTCTGC
CATCGAGAAGGGTACCGGCAAGACCAACAAGATCACCATCACCAACGACA
AGGGCCGTCTCTCCAAGGAGGAGATCGAGCGCATGCTTGCTGAGGCCGAA
AAGTTCAAGGCTGAGGACGAGGCTGAGGCTTCCCGTATCCAGGCCAAGAA
CGGTCTCGAGTCCTACGCTTACTCCCTCAAGAACACCATCAACGAGGGCA
AGCTCACCATCAGCGATGAGGACAAGCAGAAGGTCACCGCCAAGGTTGAC
GAGGTCATCAGCTGGCTCGACAGCAACCAGACCGCCGAGAAGGACGAGTA
CGAGGCTCAGCAGAAGGAGCTTGAGGGTGTTGCCAACCCCATCATCTCCG
CTGCCTACGGTGGTGCCGCTGGTGCCGCCCCCGGCGGTGCTGCCCCCGGT
GCTACCCGCACTGCTGACGAGGTCGAGGAGCGCCCTGAGGAGCTCGACTA
AATGGCCCCCGCTGTTGGTATCGATTTGGGAACCACCTACTCCTGTGTGG
GTGTCTTCCGTGATGACCGCATTGAAATCATCGCCAACGACCAGGGTAAC
CGCACTACCCCCTCTTTCGTGGCTTTCACCGACACCGAGCGTCTCATCGG
TGATGCCGCCAAGAACCAGGTCGCCATGAACCCTCACAACACCGTCTTCG
ATGCTAAGCGTCTGATCGGTCGTCGTTTTGCCGACGCTGAGGTCCAGTCC
GACATGAAGCACTGGCCCTTCAAGGTTGTCGAGAAGGGTGGCAAGCCCAT
CGTCGAGGTTGAGTTCAAGGGCGAGACCAAGCAGTTCACCCCCGAGGAGG
TCTCCTCCATGATCCTCACCAAGATGCGTGAGACCGCTGAGGCCTACCTC
GGTGGCACCGTCAACAACGCTGTCATCACTGTCCCCGCCTACTTCAACGA
CTCTCAGCGTCAGGCCACCAAGGATGCTGGTCTCATTGCCGGCCTGAACG
TTCTCCGTATCATCAACGAGCCCACCGCTGCTGCCATTGCCTACGGTCTG
GACAAGAAGCCGAGGGTGAGCGCAACGTATCTTCGAGGTCAAGGCCACCG
CTGTGACACTCACTTGGGTGGTGAGGACTTCGACAACCGCCTCGTCAACC
ACTTCGTCAACGAGTTCAAGCGCAAGCACAAGAAGGACCTCACCTCCAAC
GCTCGTGCTCTCCGTCGTCTCCGCACCGCTTGCGAGCGTGCCAAGCGTAC
CCTCTCTTCCGCTGCCCAGACCTCCATTGAGATCGACTCTCTCTTCGAGG
GTATCGACTTCTACACCTCCATCACCCGTGCTCGTTTCGAGGAGCTCTGC
CAGGACCTCTTCCGTTCCACCATGGAGCCCGTCGAGCGTGTCCTCCGTGA
CGCCAAGATCGACAAGTCCTCCGTCCACGAGATCGTCCTGGTCGGTGGTT
CCACCCGTATCCCCAAGATCCAGCGTCTCGTCAGTGACTTCTTCAACAAG
GACGCCAACAAGTCCATCAACCCCGATGAGGCCGTTGCCTACGGTGCTGC
CGTCCAGGCTGCTATCCTGTCTGGTGACACTTCCTCCAAGTCCACCAACG
AGATCCTCCTGCTCGACGTTGCCCCTCTCTCCCTCGGTATCGAGACCGCT
GGTGGTGTCATGACTGCTCTCATCAAGCGCAACACCACCATCCCCACCAA
GAAGTCCGAGACCTTCTCCACCTACTCCGACAACCAGCCCGGTGTCTTGA
TCCAGGTCTACGAGGGTGAGCGTGCCCGTACCAAGGACAACAACCTGCTC
GGCAAGTTCGAGCTCACTGGCATCCCCCCCGCCCCCCGTGGTGTTCCCCA
GATTGAGGTCACCTTCGACCTTGATGCCAACGGAATCATGAACGTCTCTG
CCATCGAGAAGGGTACCGGCAAGACCAACAAGATCACCATCACCAACGAC
AAGGGCCGTCTCTCCAAGGAGGAGATCGAGCGCATGCTTGCTGAGGCCGA
AAAGTTCAAGGCTGAGGACGAGGCTGAGGCTTCCCGTATCCAGGCCAAGA
ACGGTCTCGAGTCCTACGCTTACTCCCTCAAGAACACCATCAACGAGGGC
AAGCTCACCATCAGCGATGAGGACAAGCAGAAGGTCACCGCCAAGGTTGA
CGAGGTCATCAGCTGGCTCGACAGCAACCAGACCGCCGAGAAGGACGAGT
ACGAGGCTCAGCAGAAGGAGCTTGAGGGTGTTGCCAACCCCATCATCTCC
GCTGCCTACGGTGGTGCCGCTGGTGCCGCCCCCGGCGGTGCTGCCCCCGG
TGCTACCCGCACTGCTGACGAGGTCGAGGAGCGCCCTGAGGAGCTCGACT
AAATGGCCCCCGCTGTTGGTATCGATTTGGGAACCACCTACTCCTGTGTG
GGTGTCTTCCGTGATGACCGCATTGAAATCATCGCCAACGACCAGGGTAA
CCGCACTACCCCCTCTTTCGTGGCTTTCACCGACACCGAGCGTCTCATCG
GTGATGCCGCCAAGAACCAGGTCGCCATGAACCCTCACAACACCGTCTTC
GATGCTAAGCGTCTGATCGGTCGTCGTTTTGCCGACGCTGAGGTCCAGTC
CGACATGAAGCACTGGCCCTTCAAGGTTGTCGAGAAGGGTGGCAAGCCCA
TCGTCGAGGTTGAGTTCAAGGGCGAGACCAAGCAGTTCACCCCCGAGGAG
GTCTCCTCCATGATCCTCACCAAGATGCGTGAGACCGCTGAGGCCTACCT
CGGTGGCACCGTCAACAACGCTGTCATCACTGTCCCCGCCTACTTCAACG
ACTCTCAGCGTCAGGCCACCAAGGATGCTGGTCTCATTGCCGGCCTGAAC
GTTCTCCGTATCATCAACGAGCCCACCGCTGCTGCCATTGCCTACGGTCT
GGACAAGAAGCCGAGGGTGAGCGCAACGTATCTTCGAGGTCAAGGCCACC
GCTGTGACACTCACTTGGGTGGTGAGGACTTCGACAACCGCCTCGTCAAC
CACTTCGTCAACGAGTTCAAGCGCAAGCACAAGAAGGACCTCACCTCCAA
CGCTCGTGCTCTCCGTCGTCTCCGCACCGCTTGCGAGCGTGCCAAGCGTA
CCCTCTCTTCCGCTGCCCAGACCTCCATTGAGATCGACTCTCTCTTCGAG
GGTATCGACTTCTACACCTCCATCACCCGTGCTCGTTTCGAGGAGCTCTG
CCAGGACCTCTTCCGTTCCACCATGGAGCCCGTCGAGCGTGTCCTCCGTG
ACGCCAAGATCGACAAGTCCTCCGTCCACGAGATCGTCCTGGTCGGTGGT
TCCACCCGTATCCCCAAGATCCAGCGTCTCGTCAGTGACTTCTTCAACAA
GGACGCCAACAAGTCCATCAACCCCGATGAGGCCGTTGCCTACGGTGCTG
CCGTCCAGGCTGCTATCCTGTCTGGTGACACTTCCTCCAAGTCCACCAAC
GAGATCCTCCTGCTCGACGTTGCCCCTCTCTCCCTCGGTATCGAGACCGC
TGGTGGTGTCATGACTGCTCTCATCAAGCGCAACACCACCATCCCCACCA
AGAAGTCCGAGACCTTCTCCACCTACTCCGACAACCAGCCCGGTGTCTTG
ATCCAGGTCTACGAGGGTGAGCGTGCCCGTACCAAGGACAACAACCTGCT
CGGCAAGTTCGAGCTCACTGGCATCCCCCCCGCCCCCCGTGGTGTTCCCC
AGATTGAGGTCACCTTCGACCTTGATGCCAACGGAATCATGAACGTCTCT
GCCATCGAGAAGGGTACCGGCAAGACCAACAAGATCACCATCACCAACGA
CAAGGGCCGTCTCTCCAAGGAGGAGATCGAGCGCATGCTTGCTGAGGCCG
AAAAGTTCAAGGCTGAGGACGAGGCTGAGGCTTCCCGTATCCAGGCCAAG
AACGGTCTCGAGTCCTACGCTTACTCCCTCAAGAACACCATCAACGAGGG
CAAGCTCACCATCAGCGATGAGGACAAGCAGAAGGTCACCGCCAAGGTTG
ACGAGGTCATCAGCTGGCTCGACAGCAACCAGACCGCCGAGAAGGACGAG
TACGAGGCTCAGCAGAAGGAGCTTGAGGGTGTTGCCAACCCCATCATCTC
CGCTGCCTACGGTGGTGCCGCTGGTGCCGCCCCCGGCGGTGCTGCCCCCG
GTGCTACCCGCACTGCTGACGAGGTCGAGGAGCGCCCTGAGGAGCTCGAC
TAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
HSP70CBS51388_004904Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004904-T1.exon1CBS51388_004904-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_004904-T1.exon2CBS51388_004904-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_004904-T1.exon3CBS51388_004904-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004904-T1.cdsCBS51388_004904-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004904-T1CBS51388_004904-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR043129
DBxrefInterPro:IPR018181
DBxrefInterPro:IPR029047
DBxrefInterPro:IPR013126
DBxrefInterPro:IPR029048
Product70-kilodalton heat shock protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:2250085..2252061 +