You are here

CBS51388_004910-T1, CBS51388_004910-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004910-T1
Unique NameCBS51388_004910-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:2263188..2263661-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004910-T1 ID=CBS51388_004910-T1|Name=CBS51388_004910-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=474bp|location=Sequence derived from alignment at An07:2263188..2263661- (Aspergillus niger CBS 513.88)
ATGAAGTTGTCTGCTACTGCTACCGTCTTGGGGTTGCTTCCCTTGGCCCT GGCCGAATCGATTCTGGTCACGTTCCCTTCAGGTACCCCTGACTCGGTGG TTGATCAGGCAAAGCAATCAGTTAAGGACGCTGTATGTGACCGGGTGCTT TGACAGCGTTGGCACATCTCTATTTTACTGACTGGTCGTTTCTGGTAGGG TGGCAAGATCACCCATAATTACAGTAAGCATCATGCAGCGTTCCTAGTTC CCTAGTCATCCTTGCGTTTTGGGTAGTGGCAGTGCTAACATGCCGCTTTA TACAGCTTTGCTCAAGTAATTCTCTCCTGAAAGTTTCGGAGTGCTTGGTC TGACATACATACACACAGGGGCTTCGCAGCCGACACCAAGGACGATTCGG TTCAACAGCTATCGACTGAATTCGCAGCATACAATCCAACTATTGAGAAA GACATCACTGTCACTATCCAGTAA
back to top

Coding sequence (CDS) from alignment at An07:2263188..2263661-

>CBS51388_004910-T1 ID=CBS51388_004910-T1|Name=CBS51388_004910-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1092bp|location=Sequence derived from alignment at An07:2263188..2263661- (Aspergillus niger CBS 513.88)
GGGCTTCGCAGCCGACACCAAGGACGATTCGGTTCAACAGCTATCGACTG
AATTCGCAGCATACAATCCAACTATTGAGAAAGACATCACTGTCACTATC
CAGTAACTTTGCTCAAGGTGGCAAGATCACCCATAATTACAATGAAGTTG
TCTGCTACTGCTACCGTCTTGGGGTTGCTTCCCTTGGCCCTGGCCGAATC
GATTCTGGTCACGTTCCCTTCAGGTACCCCTGACTCGGTGGTTGATCAGG
CAAAGCAATCAGTTAAGGACGCTGGGCTTCGCAGCCGACACCAAGGACGA
TTCGGTTCAACAGCTATCGACTGAATTCGCAGCATACAATCCAACTATTG
AGAAAGACATCACTGTCACTATCCAGTAACTTTGCTCAAGGTGGCAAGAT
CACCCATAATTACAATGAAGTTGTCTGCTACTGCTACCGTCTTGGGGTTG
CTTCCCTTGGCCCTGGCCGAATCGATTCTGGTCACGTTCCCTTCAGGTAC
CCCTGACTCGGTGGTTGATCAGGCAAAGCAATCAGTTAAGGACGCTGGGC
TTCGCAGCCGACACCAAGGACGATTCGGTTCAACAGCTATCGACTGAATT
CGCAGCATACAATCCAACTATTGAGAAAGACATCACTGTCACTATCCAGT
AACTTTGCTCAAGGTGGCAAGATCACCCATAATTACAATGAAGTTGTCTG
CTACTGCTACCGTCTTGGGGTTGCTTCCCTTGGCCCTGGCCGAATCGATT
CTGGTCACGTTCCCTTCAGGTACCCCTGACTCGGTGGTTGATCAGGCAAA
GCAATCAGTTAAGGACGCTGGGCTTCGCAGCCGACACCAAGGACGATTCG
GTTCAACAGCTATCGACTGAATTCGCAGCATACAATCCAACTATTGAGAA
AGACATCACTGTCACTATCCAGTAACTTTGCTCAAGGTGGCAAGATCACC
CATAATTACAATGAAGTTGTCTGCTACTGCTACCGTCTTGGGGTTGCTTC
CCTTGGCCCTGGCCGAATCGATTCTGGTCACGTTCCCTTCAGGTACCCCT
GACTCGGTGGTTGATCAGGCAAAGCAATCAGTTAAGGACGCT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004910CBS51388_004910Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004910-T1CBS51388_004910-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004910-T1.cdsCBS51388_004910-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004910-T1.exon4CBS51388_004910-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_004910-T1.exon3CBS51388_004910-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_004910-T1.exon2CBS51388_004910-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_004910-T1.exon1CBS51388_004910-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
DBxrefInterPro:IPR037045
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:2263188..2263661 -