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Sequences
The following sequences are available for this feature:
mRNA from alignment at An07:2288662..2289612+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004915-T1 ID=CBS51388_004915-T1|Name=CBS51388_004915-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=951bp|location=Sequence derived from alignment at An07:2288662..2289612+ (Aspergillus niger CBS 513.88)
ATGATTGCGTTACAAAATCACGCTATCTTACCTCCTCCCGCCAAAGTGGA
TATCTCACTGCTGCTGAAGCCCCAGGATGAAGAGGAAGCCGCCTCGGTGA
CGACAGCGCCTGGCTACCCACCCAGCGCAATCCCGCCGCCCTCGGTAGCA
CCTGCGTTGCCAGTAGCTGCTCCAGCATCGTTGTCCTCGGTCCCCCCAGT
GCCCCAGCTTACGTCTAAAATTCCGGCTACGGTGCCTGCCAAGCGCCTTC
AACCTGCCCACACTGCAGAGTCGCCGGCTAAAAAGCAATCCAAGTGGTCC
CCGGAGGAGGATGCCCTTATCATCGAGCTACGAGGAAGCGGTATGAAATG
GGAGGATATTAGTAAACGGCTTCCTGGCCGAAGTGCCATCAGTTGCCGTC
TACACTATCAGAATTACTTGGAACGCAGAAGTGAGTGGGATGAGGATAAA
AAGAACAAACTTGCAAGGTTATACGAAAGGTATGTTCTATGCGATAGCGA
GGCGGCGCCTCGAGATCATTAAAAGACGGTTGTTGATTGTCATTGCAGGT
TCAAAGCAGAGATGTGGTCAAAGGTAGCAGAAGAGATGGCCATTCCGTGG
AGGGCTGCAGAAGCCATGCACTGGCAACTGGGAGAACAGGAAATGGCGCG
TCGAGCGGGAGTAGTCCCGTTCTCATTATCAAGTACTGCCATAGATCCGC
CAGCGCCCCGAACTCGCAGAGCCAGCACGTCTCTATCTCGACCAAGAAAA
GGATCGACATCCCGTCCGATCCCCCCTCCCCCCCAACTTCCTTCCGTGGA
AGAGCTTACCGCTGGAGTGCCTGCATTTGCACCGCACCCAACTTTTCCGG
CCCCTCGCGAACCTTATAGATTGGGGCGACCCTTGGATCTGGGTGGTCAC
AGTAGCCATCTTGGACCCAACCTCGGTCTTCCCCCTCGAACCCTCCCGTA
G back to topCoding sequence (CDS) from alignment at An07:2288662..2289612+ >CBS51388_004915-T1 ID=CBS51388_004915-T1|Name=CBS51388_004915-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1764bp|location=Sequence derived from alignment at An07:2288662..2289612+ (Aspergillus niger CBS 513.88)
ATGATTGCGTTACAAAATCACGCTATCTTACCTCCTCCCGCCAAAGTGGA
TATCTCACTGCTGCTGAAGCCCCAGGATGAAGAGGAAGCCGCCTCGGTGA
CGACAGCGCCTGGCTACCCACCCAGCGCAATCCCGCCGCCCTCGGTAGCA
CCTGCGTTGCCAGTAGCTGCTCCAGCATCGTTGTCCTCGGTCCCCCCAGT
GCCCCAGCTTACGTCTAAAATTCCGGCTACGGTGCCTGCCAAGCGCCTTC
AACCTGCCCACACTGCAGAGTCGCCGGCTAAAAAGCAATCCAAGTGGTCC
CCGGAGGAGGATGCCCTTATCATCGAGCTACGAGGAAGCGGTATGAAATG
GGAGGATATTAGTAAACGGCTTCCTGGCCGAAGTGCCATCAGTTGCCGTC
TACACTATCAGAATTACTTGGAACGCAGAAGTGAGTGGGATGAGGATAAA
AAGAACAAACTTGCAAGGTTATACGAAAGGTTCAAAGCAGAGATGTGGTC
AAAGGTAGCAGAAGAGATGGCCATTCCGTGGAGGGCTGCAGAAGCCATGC
ACTGGCAACTGGGAGAACAGGAAATGGCGCGTCGAGCGGGAGTAGTCCCG
TTCTCATTATCAAGTACTGCCATAGATCCGCCAGCGCCCCGAACTCGCAG
AGCCAGCACGTCTCTATCTCGACCAAGAAAAGGATCGACATCCCGTCCGA
TCCCCCCTCCCCCCCAACTTCCTTCCGTGGAAGAGCTTACCGCTGGAGTG
CCTGCATTTGCACCGCACCCAACTTTTCCGGCCCCTCGCGAACCTTATAG
ATTGGGGCGACCCTTGGATCTGGGTGGTCACAGTAGCCATCTTGGACCCA
ACCTCGGTCTTCCCCCTCGAACCCTCCCGTAGATGATTGCGTTACAAAAT
CACGCTATCTTACCTCCTCCCGCCAAAGTGGATATCTCACTGCTGCTGAA
GCCCCAGGATGAAGAGGAAGCCGCCTCGGTGACGACAGCGCCTGGCTACC
CACCCAGCGCAATCCCGCCGCCCTCGGTAGCACCTGCGTTGCCAGTAGCT
GCTCCAGCATCGTTGTCCTCGGTCCCCCCAGTGCCCCAGCTTACGTCTAA
AATTCCGGCTACGGTGCCTGCCAAGCGCCTTCAACCTGCCCACACTGCAG
AGTCGCCGGCTAAAAAGCAATCCAAGTGGTCCCCGGAGGAGGATGCCCTT
ATCATCGAGCTACGAGGAAGCGGTATGAAATGGGAGGATATTAGTAAACG
GCTTCCTGGCCGAAGTGCCATCAGTTGCCGTCTACACTATCAGAATTACT
TGGAACGCAGAAGTGAGTGGGATGAGGATAAAAAGAACAAACTTGCAAGG
TTATACGAAAGGTTCAAAGCAGAGATGTGGTCAAAGGTAGCAGAAGAGAT
GGCCATTCCGTGGAGGGCTGCAGAAGCCATGCACTGGCAACTGGGAGAAC
AGGAAATGGCGCGTCGAGCGGGAGTAGTCCCGTTCTCATTATCAAGTACT
GCCATAGATCCGCCAGCGCCCCGAACTCGCAGAGCCAGCACGTCTCTATC
TCGACCAAGAAAAGGATCGACATCCCGTCCGATCCCCCCTCCCCCCCAAC
TTCCTTCCGTGGAAGAGCTTACCGCTGGAGTGCCTGCATTTGCACCGCAC
CCAACTTTTCCGGCCCCTCGCGAACCTTATAGATTGGGGCGACCCTTGGA
TCTGGGTGGTCACAGTAGCCATCTTGGACCCAACCTCGGTCTTCCCCCTC
GAACCCTCCCGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009057 |
| DBxref | InterPro:IPR017930 |
| DBxref | InterPro:IPR017877 |
| DBxref | InterPro:IPR001005 |
| DBxref | PFAM:PF00249 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An07 | supercontig | An07:2288662..2289612 + |
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