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CBS51388_004923-T1, CBS51388_004923-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004923-T1
Unique NameCBS51388_004923-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:2304508..2305833+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004923-T1 ID=CBS51388_004923-T1|Name=CBS51388_004923-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1326bp|location=Sequence derived from alignment at An07:2304508..2305833+ (Aspergillus niger CBS 513.88)
ATGAGTTTCCAAGCTGGAGGTCGTGGCTGCTTCAACTGTGAGTCCCTCCC
CCCGCTCTGTTCCGTCGATGGTCAAACCTGTGCCCTTCGATTCTGTCATG
CACCTTGTGTGCCTCCATTCCCGCAGCTCCAGCCGAGAGAGGGAAAAAAA
GTTTCCTTGATTACCATGATATGATTTCCCATCATCCACCGAGTTTTGCT
TTATGTCCTCAGTTAAAAGCTGAGATCTTTTGACCTTCCATGACCATCTA
TCCGTCCCCATTTCTCTCATAGCGAATGATCCTGTCGTCTTAGCGCGGTG
GTTACCATCCCTGGCGAAGCGAATCTCTGGATTGGTACGGAAAAGCTAAC
AAGAAATCTTCATTCATTTTAGGCGGTGATGCTTCCCACCAGGTAAACCT
TTCCCTGTCACCATCGTCTCCTCAGAGCATCCTCAGTCAGCTTTTTTTTT
TCTTTCTTTCTTTCTGGGGTTGTGCCTATAATCATGGTTTGGCAACGTTC
TAATCTCTACAGGCCCGTGACTGTCCCAAGAAGGGCACTCCCACCTGGTA
TGCTTAACTTGCACTGTCCATTTTCCTCTTGTTGTAAACATTATTGACTA
AACTCGATAGCTACAACTGTGGTGGTATGTCTCCCGACCTTGTCTCCTCT
ACATTAGTGTCCAATCTCCCTATCCCTTCTCGTTCACTGGCCTATTTTCA
TTGCGCCTTTTTCCGTTGATCCTCAGCCACTCTATCTAACCGCACCTTGG
TACCATTACAGGACAGGGACACGTCAGTAAGTCAAACCAGCGAATTCTCC
AGTTGCTTCTCCGTCTTTTCATTATGCTTTTTCCTTTTTCTTTCGGAGAT
GCTAAGAAGCCTATCATCCAGGCCGTGAATGCACTGTAGCTCCCAAGGAG
AAGTCCTGCTACCGCTGCGGTGGTGTGGGCCACATCTCCCGCGAGTGCCA
GGCTAGCCCCGCCGAGGGTTTCGGTGCTGCTGCTGGTGGTGGCCAGGAGT
GCTACAAGTGCGGCCGTGTCGGTCACATTGCTAGGAATTGCCCTCAGAGC
GGCGGCTACAGTGGTGGCTTTGGCGGTCGTCAGCAGACTTGCTACTCTTG
CGGTGGTTTCGGACACATGGCTCGCGACTGCACCAATGGTCAGAAGTGCT
ACAACTGTAGGTTACCGCTCCCTTCACAATCCCTCAGGTTCAGACACGCT
AACAATATGCTTCTAGGCGGTGAGGTTGGCCACGTCTCTCGCGACTGCCC
TACGGAGGCCAAGGGCGAGCGGGTGTGCTACAACTGCAAGCAGCCTGGCC
ACGTCCAGGCCGCTTGCCCTAACTAA
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Coding sequence (CDS) from alignment at An07:2304508..2305833+

>CBS51388_004923-T1 ID=CBS51388_004923-T1|Name=CBS51388_004923-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3612bp|location=Sequence derived from alignment at An07:2304508..2305833+ (Aspergillus niger CBS 513.88)
ATGAGTTTCCAAGCTGGAGGTCGTGGCTGCTTCAACTGCGGTGATGCTTC
CCACCAGGCCCGTGACTGTCCCAAGAAGGGCACTCCCACCTGCTACAACT
GTGGTGGACAGGGACACGTCAGCCGTGAATGCACTGTAGCTCCCAAGGAG
AAGTCCTGCTACCGCTGCGGTGGTGTGGGCCACATCTCCCGCGAGTGCCA
GGCTAGCCCCGCCGAGGGTTTCGGTGCTGCTGCTGGTGGTGGCCAGGAGT
GCTACAAGTGCGGCCGTGTCGGTCACATTGCTAGGAATTGCCCTCAGAGC
GGCGGCTACAGTGGTGGCTTTGGCGGTCGTCAGCAGACTTGCTACTCTTG
CGGTGGTTTCGGACACATGGCTCGCGACTGCACCAATGGTCAGAAGTGCT
ACAACTGCGGTGAGGTTGGCCACGTCTCTCGCGACTGCCCTACGGAGGCC
AAGGGCGAGCGGGTGTGCTACAACTGCAAGCAGCCTGGCCACGTCCAGGC
CGCTTGCCCTAACTAAATGAGTTTCCAAGCTGGAGGTCGTGGCTGCTTCA
ACTGCGGTGATGCTTCCCACCAGGCCCGTGACTGTCCCAAGAAGGGCACT
CCCACCTGCTACAACTGTGGTGGACAGGGACACGTCAGCCGTGAATGCAC
TGTAGCTCCCAAGGAGAAGTCCTGCTACCGCTGCGGTGGTGTGGGCCACA
TCTCCCGCGAGTGCCAGGCTAGCCCCGCCGAGGGTTTCGGTGCTGCTGCT
GGTGGTGGCCAGGAGTGCTACAAGTGCGGCCGTGTCGGTCACATTGCTAG
GAATTGCCCTCAGAGCGGCGGCTACAGTGGTGGCTTTGGCGGTCGTCAGC
AGACTTGCTACTCTTGCGGTGGTTTCGGACACATGGCTCGCGACTGCACC
AATGGTCAGAAGTGCTACAACTGCGGTGAGGTTGGCCACGTCTCTCGCGA
CTGCCCTACGGAGGCCAAGGGCGAGCGGGTGTGCTACAACTGCAAGCAGC
CTGGCCACGTCCAGGCCGCTTGCCCTAACTAAATGAGTTTCCAAGCTGGA
GGTCGTGGCTGCTTCAACTGCGGTGATGCTTCCCACCAGGCCCGTGACTG
TCCCAAGAAGGGCACTCCCACCTGCTACAACTGTGGTGGACAGGGACACG
TCAGCCGTGAATGCACTGTAGCTCCCAAGGAGAAGTCCTGCTACCGCTGC
GGTGGTGTGGGCCACATCTCCCGCGAGTGCCAGGCTAGCCCCGCCGAGGG
TTTCGGTGCTGCTGCTGGTGGTGGCCAGGAGTGCTACAAGTGCGGCCGTG
TCGGTCACATTGCTAGGAATTGCCCTCAGAGCGGCGGCTACAGTGGTGGC
TTTGGCGGTCGTCAGCAGACTTGCTACTCTTGCGGTGGTTTCGGACACAT
GGCTCGCGACTGCACCAATGGTCAGAAGTGCTACAACTGCGGTGAGGTTG
GCCACGTCTCTCGCGACTGCCCTACGGAGGCCAAGGGCGAGCGGGTGTGC
TACAACTGCAAGCAGCCTGGCCACGTCCAGGCCGCTTGCCCTAACTAAAT
GAGTTTCCAAGCTGGAGGTCGTGGCTGCTTCAACTGCGGTGATGCTTCCC
ACCAGGCCCGTGACTGTCCCAAGAAGGGCACTCCCACCTGCTACAACTGT
GGTGGACAGGGACACGTCAGCCGTGAATGCACTGTAGCTCCCAAGGAGAA
GTCCTGCTACCGCTGCGGTGGTGTGGGCCACATCTCCCGCGAGTGCCAGG
CTAGCCCCGCCGAGGGTTTCGGTGCTGCTGCTGGTGGTGGCCAGGAGTGC
TACAAGTGCGGCCGTGTCGGTCACATTGCTAGGAATTGCCCTCAGAGCGG
CGGCTACAGTGGTGGCTTTGGCGGTCGTCAGCAGACTTGCTACTCTTGCG
GTGGTTTCGGACACATGGCTCGCGACTGCACCAATGGTCAGAAGTGCTAC
AACTGCGGTGAGGTTGGCCACGTCTCTCGCGACTGCCCTACGGAGGCCAA
GGGCGAGCGGGTGTGCTACAACTGCAAGCAGCCTGGCCACGTCCAGGCCG
CTTGCCCTAACTAAATGAGTTTCCAAGCTGGAGGTCGTGGCTGCTTCAAC
TGCGGTGATGCTTCCCACCAGGCCCGTGACTGTCCCAAGAAGGGCACTCC
CACCTGCTACAACTGTGGTGGACAGGGACACGTCAGCCGTGAATGCACTG
TAGCTCCCAAGGAGAAGTCCTGCTACCGCTGCGGTGGTGTGGGCCACATC
TCCCGCGAGTGCCAGGCTAGCCCCGCCGAGGGTTTCGGTGCTGCTGCTGG
TGGTGGCCAGGAGTGCTACAAGTGCGGCCGTGTCGGTCACATTGCTAGGA
ATTGCCCTCAGAGCGGCGGCTACAGTGGTGGCTTTGGCGGTCGTCAGCAG
ACTTGCTACTCTTGCGGTGGTTTCGGACACATGGCTCGCGACTGCACCAA
TGGTCAGAAGTGCTACAACTGCGGTGAGGTTGGCCACGTCTCTCGCGACT
GCCCTACGGAGGCCAAGGGCGAGCGGGTGTGCTACAACTGCAAGCAGCCT
GGCCACGTCCAGGCCGCTTGCCCTAACTAAATGAGTTTCCAAGCTGGAGG
TCGTGGCTGCTTCAACTGCGGTGATGCTTCCCACCAGGCCCGTGACTGTC
CCAAGAAGGGCACTCCCACCTGCTACAACTGTGGTGGACAGGGACACGTC
AGCCGTGAATGCACTGTAGCTCCCAAGGAGAAGTCCTGCTACCGCTGCGG
TGGTGTGGGCCACATCTCCCGCGAGTGCCAGGCTAGCCCCGCCGAGGGTT
TCGGTGCTGCTGCTGGTGGTGGCCAGGAGTGCTACAAGTGCGGCCGTGTC
GGTCACATTGCTAGGAATTGCCCTCAGAGCGGCGGCTACAGTGGTGGCTT
TGGCGGTCGTCAGCAGACTTGCTACTCTTGCGGTGGTTTCGGACACATGG
CTCGCGACTGCACCAATGGTCAGAAGTGCTACAACTGCGGTGAGGTTGGC
CACGTCTCTCGCGACTGCCCTACGGAGGCCAAGGGCGAGCGGGTGTGCTA
CAACTGCAAGCAGCCTGGCCACGTCCAGGCCGCTTGCCCTAACTAAATGA
GTTTCCAAGCTGGAGGTCGTGGCTGCTTCAACTGCGGTGATGCTTCCCAC
CAGGCCCGTGACTGTCCCAAGAAGGGCACTCCCACCTGCTACAACTGTGG
TGGACAGGGACACGTCAGCCGTGAATGCACTGTAGCTCCCAAGGAGAAGT
CCTGCTACCGCTGCGGTGGTGTGGGCCACATCTCCCGCGAGTGCCAGGCT
AGCCCCGCCGAGGGTTTCGGTGCTGCTGCTGGTGGTGGCCAGGAGTGCTA
CAAGTGCGGCCGTGTCGGTCACATTGCTAGGAATTGCCCTCAGAGCGGCG
GCTACAGTGGTGGCTTTGGCGGTCGTCAGCAGACTTGCTACTCTTGCGGT
GGTTTCGGACACATGGCTCGCGACTGCACCAATGGTCAGAAGTGCTACAA
CTGCGGTGAGGTTGGCCACGTCTCTCGCGACTGCCCTACGGAGGCCAAGG
GCGAGCGGGTGTGCTACAACTGCAAGCAGCCTGGCCACGTCCAGGCCGCT
TGCCCTAACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004923CBS51388_004923Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004923-T1CBS51388_004923-T1-proteinAspergillus niger CBS 513.88polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004923-T1.exon1CBS51388_004923-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_004923-T1.exon2CBS51388_004923-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_004923-T1.exon3CBS51388_004923-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_004923-T1.exon4CBS51388_004923-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_004923-T1.exon5CBS51388_004923-T1.exon5Aspergillus niger CBS 513.88exon
CBS51388_004923-T1.exon6CBS51388_004923-T1.exon6Aspergillus niger CBS 513.88exon
CBS51388_004923-T1.exon7CBS51388_004923-T1.exon7Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004923-T1.cdsCBS51388_004923-T1.cdsAspergillus niger CBS 513.88CDS


Properties
Property NameValue
DBxrefInterPro:IPR036875
DBxrefInterPro:IPR001878
DBxrefPFAM:PF00098
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:2304508..2305833 +
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