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CBS51388_004936-T1, CBS51388_004936-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004936-T1
Unique NameCBS51388_004936-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:1216..2389+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004936-T1 ID=CBS51388_004936-T1|Name=CBS51388_004936-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1174bp|location=Sequence derived from alignment at An08:1216..2389+ (Aspergillus niger CBS 513.88)
ATGTCGTTTTCAAACCTTGTTTCTGACCTTGCGTTCAGAGACGCTCAGGA
TGACCGAAGTTCTCAAATATCCCATGCACGGTCTCAAGCTACCGCTCGAT
CATATACCAGCACGGCTGCGACCAGCGTTAGCATATCTGGTGATATCTCT
AGCCAGCTTCATTCTGGCTATAGTCATCCACTGAGTAGATCATGGCAAGC
CGAGAAGCAGTTGACCAAGGTTCGTACTACGACATAGTCCTGTACTAGCA
TGGTCTAATTGTGTGCAGGAGATGCTCATATATCCCCTTTTCATTACCGA
TAACCCTGATGAGGAGACGCCTATTCCATCCCTTCCAAATCAGTATCGCC
GAGGACTGAATCGGTTGGTCCCCTTCTTAAGACCATTAGTACAGAAAGGC
CTGCGTTCCGTGATTCTGTTCGGTGTCCCTTTGCATCCATCTGCAAAGGA
TGCGCTGGGAACCGCTGCAGATGACCCGACCGGTCCAGTAGTTCAGGCCA
TCCGCCTTCTTCGTTCGCGCTTTCCTCAACTTTATATCGTGACGGATGTT
TGTCTTTGTGAATACACCTCACATGGTCATTGCGGGATACTACGTGAGGA
TGGGACGCTCGATAACGCACAGTCCGTTGATAGAATCTCAGATGTAGCCC
TCGCCTATGCTGCTGCCGGTGCTCACTGCGTGGCTCCGTCAGATATGAAT
GACGGCAGAGTCCGCGCCATAAAGCTGAAGCTTATTGAAGCTGGCATAGC
TCATCGTGTCCTCCTAATGTCCTACAGTGCAAAATTCAGTGGATGTCTAT
ATGGTCCCTTCCGAGATGCCGCAGGCTCTTGCCCATCCTTCGGAGACCGC
AGGTGTTACCAATTACCCCCAGGTGGCCGGGGGCTTGCTCGGCGAGCGAT
ACAGCGCGATATTGGTGAGGGCGCAGACATCATAATGGTGAAGCCCGCTA
GTAGCTATTTGGATATCATACGGGACGCCAAAGAGCTCGCCAAAGACATG
CCAGTTGCCGCTTACCAAGTTAGCGGAGAGTATGCCATGATACATGCAGG
GGCTAAGGCTGGCGTTTTCGATTTGAAATCAATGGCTTTCGAGAGCACAG
AGGGTATACTACGGGCAGGAGCTGGTATTATTGTGAGCTACTTTGTGCCC
GACTTTCTGGATTGGCTTTCTTAA
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Coding sequence (CDS) from alignment at An08:1216..2389+

>CBS51388_004936-T1 ID=CBS51388_004936-T1|Name=CBS51388_004936-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2250bp|location=Sequence derived from alignment at An08:1216..2389+ (Aspergillus niger CBS 513.88)
ATGTCGTTTTCAAACCTTGTTTCTGACCTTGCGTTCAGAGACGCTCAGGA
TGACCGAAGTTCTCAAATATCCCATGCACGGTCTCAAGCTACCGCTCGAT
CATATACCAGCACGGCTGCGACCAGCGTTAGCATATCTGGTGATATCTCT
AGCCAGCTTCATTCTGGCTATAGTCATCCACTGAGTAGATCATGGCAAGC
CGAGAAGCAGTTGACCAAGGAGATGCTCATATATCCCCTTTTCATTACCG
ATAACCCTGATGAGGAGACGCCTATTCCATCCCTTCCAAATCAGTATCGC
CGAGGACTGAATCGGTTGGTCCCCTTCTTAAGACCATTAGTACAGAAAGG
CCTGCGTTCCGTGATTCTGTTCGGTGTCCCTTTGCATCCATCTGCAAAGG
ATGCGCTGGGAACCGCTGCAGATGACCCGACCGGTCCAGTAGTTCAGGCC
ATCCGCCTTCTTCGTTCGCGCTTTCCTCAACTTTATATCGTGACGGATGT
TTGTCTTTGTGAATACACCTCACATGGTCATTGCGGGATACTACGTGAGG
ATGGGACGCTCGATAACGCACAGTCCGTTGATAGAATCTCAGATGTAGCC
CTCGCCTATGCTGCTGCCGGTGCTCACTGCGTGGCTCCGTCAGATATGAA
TGACGGCAGAGTCCGCGCCATAAAGCTGAAGCTTATTGAAGCTGGCATAG
CTCATCGTGTCCTCCTAATGTCCTACAGTGCAAAATTCAGTGGATGTCTA
TATGGTCCCTTCCGAGATGCCGCAGGCTCTTGCCCATCCTTCGGAGACCG
CAGGTGTTACCAATTACCCCCAGGTGGCCGGGGGCTTGCTCGGCGAGCGA
TACAGCGCGATATTGGTGAGGGCGCAGACATCATAATGGTGAAGCCCGCT
AGTAGCTATTTGGATATCATACGGGACGCCAAAGAGCTCGCCAAAGACAT
GCCAGTTGCCGCTTACCAAGTTAGCGGAGAGTATGCCATGATACATGCAG
GGGCTAAGGCTGGCGTTTTCGATTTGAAATCAATGGCTTTCGAGAGCACA
GAGGGTATACTACGGGCAGGAGCTGGTATTATTGTGAGCTACTTTGTGCC
CGACTTTCTGGATTGGCTTTCTTAAATGTCGTTTTCAAACCTTGTTTCTG
ACCTTGCGTTCAGAGACGCTCAGGATGACCGAAGTTCTCAAATATCCCAT
GCACGGTCTCAAGCTACCGCTCGATCATATACCAGCACGGCTGCGACCAG
CGTTAGCATATCTGGTGATATCTCTAGCCAGCTTCATTCTGGCTATAGTC
ATCCACTGAGTAGATCATGGCAAGCCGAGAAGCAGTTGACCAAGGAGATG
CTCATATATCCCCTTTTCATTACCGATAACCCTGATGAGGAGACGCCTAT
TCCATCCCTTCCAAATCAGTATCGCCGAGGACTGAATCGGTTGGTCCCCT
TCTTAAGACCATTAGTACAGAAAGGCCTGCGTTCCGTGATTCTGTTCGGT
GTCCCTTTGCATCCATCTGCAAAGGATGCGCTGGGAACCGCTGCAGATGA
CCCGACCGGTCCAGTAGTTCAGGCCATCCGCCTTCTTCGTTCGCGCTTTC
CTCAACTTTATATCGTGACGGATGTTTGTCTTTGTGAATACACCTCACAT
GGTCATTGCGGGATACTACGTGAGGATGGGACGCTCGATAACGCACAGTC
CGTTGATAGAATCTCAGATGTAGCCCTCGCCTATGCTGCTGCCGGTGCTC
ACTGCGTGGCTCCGTCAGATATGAATGACGGCAGAGTCCGCGCCATAAAG
CTGAAGCTTATTGAAGCTGGCATAGCTCATCGTGTCCTCCTAATGTCCTA
CAGTGCAAAATTCAGTGGATGTCTATATGGTCCCTTCCGAGATGCCGCAG
GCTCTTGCCCATCCTTCGGAGACCGCAGGTGTTACCAATTACCCCCAGGT
GGCCGGGGGCTTGCTCGGCGAGCGATACAGCGCGATATTGGTGAGGGCGC
AGACATCATAATGGTGAAGCCCGCTAGTAGCTATTTGGATATCATACGGG
ACGCCAAAGAGCTCGCCAAAGACATGCCAGTTGCCGCTTACCAAGTTAGC
GGAGAGTATGCCATGATACATGCAGGGGCTAAGGCTGGCGTTTTCGATTT
GAAATCAATGGCTTTCGAGAGCACAGAGGGTATACTACGGGCAGGAGCTG
GTATTATTGTGAGCTACTTTGTGCCCGACTTTCTGGATTGGCTTTCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004655porphobilinogen synthase activity
GO:0046872metal ion binding
Vocabulary: Biological Process
TermDefinition
GO:0033014tetrapyrrole biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
HEM2CBS51388_004936Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004936-T1.exon1CBS51388_004936-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_004936-T1.exon2CBS51388_004936-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004936-T1.cdsCBS51388_004936-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004936-T1CBS51388_004936-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092630N3
DBxrefInterPro:IPR030656
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR001731
DBxrefPFAM:PF00490
ProductAminolevulinate dehydratase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:1216..2389 +
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