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CBS51388_004952-T1, CBS51388_004952-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004952-T1
Unique NameCBS51388_004952-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:48080..48524+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004952-T1 ID=CBS51388_004952-T1|Name=CBS51388_004952-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=445bp|location=Sequence derived from alignment at An08:48080..48524+ (Aspergillus niger CBS 513.88)
ATGTCCGCCCCCATGCTCTCGCGACGCCTCCTGCTCACGGAAACCGTGTC
CTCCGCCGCCGCCGTAGGACGGTGGTCTCGTTTCGCTATCAATGCCTCCG
TCTGGTCTCACAACTGGCTTAAGCCCGCAGCCATCTCCTTGAACATCCCC
GGGATCATGGAGGGCCTTTGGGACTCTGTTCTCCGCGCCGTCCCCAAGAA
GAAGACCTCTCACATGAAGAAGCGTCATCGGCAAATGGCTGGCAAGGCTC
TGAAGGACGTCAAGAGTCTCAGCACATGCTCCGGATGTGGGCAGGTGAAG
CGCTCGCACGTCCTGTGCCCCCATTGCGTTGAAAGTAGGTGCACATCTCT
GCGATCGAGTTTCCCCCCAATATCATTCTTAGCGACTGACTGTGTACCGA
CCTCTAGGTGTCAAGAAGCAATGGAAGCAAACCCAGACGGCTTAA
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Coding sequence (CDS) from alignment at An08:48080..48524+

>CBS51388_004952-T1 ID=CBS51388_004952-T1|Name=CBS51388_004952-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=744bp|location=Sequence derived from alignment at An08:48080..48524+ (Aspergillus niger CBS 513.88)
ATGTCCGCCCCCATGCTCTCGCGACGCCTCCTGCTCACGGAAACCGTGTC
CTCCGCCGCCGCCGTAGGACGGTGGTCTCGTTTCGCTATCAATGCCTCCG
TCTGGTCTCACAACTGGCTTAAGCCCGCAGCCATCTCCTTGAACATCCCC
GGGATCATGGAGGGCCTTTGGGACTCTGTTCTCCGCGCCGTCCCCAAGAA
GAAGACCTCTCACATGAAGAAGCGTCATCGGCAAATGGCTGGCAAGGCTC
TGAAGGACGTCAAGAGTCTCAGCACATGCTCCGGATGTGGGCAGGTGAAG
CGCTCGCACGTCCTGTGCCCCCATTGCGTTGAAAGTGTCAAGAAGCAATG
GAAGCAAACCCAGACGGCTTAAATGTCCGCCCCCATGCTCTCGCGACGCC
TCCTGCTCACGGAAACCGTGTCCTCCGCCGCCGCCGTAGGACGGTGGTCT
CGTTTCGCTATCAATGCCTCCGTCTGGTCTCACAACTGGCTTAAGCCCGC
AGCCATCTCCTTGAACATCCCCGGGATCATGGAGGGCCTTTGGGACTCTG
TTCTCCGCGCCGTCCCCAAGAAGAAGACCTCTCACATGAAGAAGCGTCAT
CGGCAAATGGCTGGCAAGGCTCTGAAGGACGTCAAGAGTCTCAGCACATG
CTCCGGATGTGGGCAGGTGAAGCGCTCGCACGTCCTGTGCCCCCATTGCG
TTGAAAGTGTCAAGAAGCAATGGAAGCAAACCCAGACGGCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015934large ribosomal subunit
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004952CBS51388_004952Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004952-T1.exon1CBS51388_004952-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_004952-T1.exon2CBS51388_004952-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004952-T1.cdsCBS51388_004952-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004952-T1CBS51388_004952-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011332
DBxrefInterPro:IPR002677
DBxrefPFAM:PF01783
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:48080..48524 +
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