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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:49150..50337+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004953-T1 ID=CBS51388_004953-T1|Name=CBS51388_004953-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1188bp|location=Sequence derived from alignment at An08:49150..50337+ (Aspergillus niger CBS 513.88)
ATGGTTCGTATATCTTGAATGACTCCCTACAATCCCTGGCATCTACTAAT
ATCAAGAACAGCCCACCCCGTTGATATCTTCGCACTGGCCGTGACTGACA
AGCAGATCTTGTCGGCCTCGGGTACTTCTTCCCTTAAAGTCCACTCGACT
ACAGACCCCGATTTTCCGCTAGTACAGTCTATTGACGGTGCCCATAAAGT
TGGGTGCCATCATGTGGTCACTAACGGAAATGGCTTGAGGGCCGTCAGTA
TCGGATTTGGCGGTGAGATCATGATTTGGTCTTGTCACGACGGAGTCTGG
GCAAAGGATGAGGGGGCCTCTGGTAAGTAGTACTCCGCTGTGTCAATCCT
GCGTCTGACCATGATCCAGTCAACAAGGCGACGCCTGCAGATGTCTGGGC
CATCGCTTTATCCGAAGATGGACAATATCTTGCCGGTGTTACGCAAGATG
GTCATATTAAGGTGTGGGATCTGGACACCAATGGCGAGGAAATCCGAGAC
TATGAAACCAAAGGTAGCTTCGGCACCTGCATAGATTTGGTAGGTGAAGA
CTAGTCTACTTCCGACACTGTTGGGGGCTCAAACTCATGGATCATCTTTC
TAGTCTGCGGATGGCCGCTTCATAGCGAGCGGGCATGAAAATGGTAGTGT
TTACATTTTCAGTACAGAAAGCGGACGCATGCCATTCAGCCTATCAGGTG
CGTAATCTGTTGTGCTAGCTTCAAACGAAGCAGACACGAGTCCGGATGAT
TGTCTAACCTGTGTATACAGGCCTGGTTAAACCTGTACGAGCTGTTGCAT
TCTCCCCTGGGGGAAAGTTCCTTGCTGCTGCTGGAGATTCCAAGGTAATT
GTGCTTTATGACACGTCCTCTGGTGAACAAGTGGCAAGTCTCTCGGGGCA
CACCGCATGGGTCATGTCGCTTTCGTGGAGCCCCACGGGGGAGTATCTCC
TCAGCGGGTAAGTGCTATGCATATCCCCTGTGAATGCTATCTAACGCTCA
AAAGGTCGTTTGATGGAAAGGTCAAAGTTTGGTCAATAGACACGAGAGCA
TGTGTGGCCACCCATTCCGAAACAGAGAAAGCAATATGGAGTGTCAAGTG
GCTAGCGAAGATCGGGAGATCAGTAGGATTTGCCACGGCGGGTGCAAACC
GGAGCATATCATTCTACCGTGAAGCCACTGGTGGTTAG back to topCoding sequence (CDS) from alignment at An08:49150..50337+ >CBS51388_004953-T1 ID=CBS51388_004953-T1|Name=CBS51388_004953-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5418bp|location=Sequence derived from alignment at An08:49150..50337+ (Aspergillus niger CBS 513.88)
ATGGTTCCCCACCCCGTTGATATCTTCGCACTGGCCGTGACTGACAAGCA
GATCTTGTCGGCCTCGGGTACTTCTTCCCTTAAAGTCCACTCGACTACAG
ACCCCGATTTTCCGCTAGTACAGTCTATTGACGGTGCCCATAAAGTTGGG
TGCCATCATGTGGTCACTAACGGAAATGGCTTGAGGGCCGTCAGTATCGG
ATTTGGCGGTGAGATCATGATTTGGTCTTGTCACGACGGAGTCTGGGCAA
AGGATGAGGGGGCCTCTGTCAACAAGGCGACGCCTGCAGATGTCTGGGCC
ATCGCTTTATCCGAAGATGGACAATATCTTGCCGGTGTTACGCAAGATGG
TCATATTAAGGTGTGGGATCTGGACACCAATGGCGAGGAAATCCGAGACT
ATGAAACCAAAGGTAGCTTCGGCACCTGCATAGATTTGTCTGCGGATGGC
CGCTTCATAGCGAGCGGGCATGAAAATGGTAGTGTTTACATTTTCAGTAC
AGAAAGCGGACGCATGCCATTCAGCCTATCAGGCCTGGTTAAACCTGTAC
GAGCTGTTGCATTCTCCCCTGGGGGAAAGTTCCTTGCTGCTGCTGGAGAT
TCCAAGGTAATTGTGCTTTATGACACGTCCTCTGGTGAACAAGTGGCAAG
TCTCTCGGGGCACACCGCATGGGTCATGTCGCTTTCGTGGAGCCCCACGG
GGGAGTATCTCCTCAGCGGGTCGTTTGATGGAAAGGTCAAAGTTTGGTCA
ATAGACACGAGAGCATGTGTGGCCACCCATTCCGAAACAGAGAAAGCAAT
ATGGAGTGTCAAGTGGCTAGCGAAGATCGGGAGATCAGTAGGATTTGCCA
CGGCGGGTGCAAACCGGAGCATATCATTCTACCGTGAAGCCACTGGTGGT
TAGATGGTTCCCCACCCCGTTGATATCTTCGCACTGGCCGTGACTGACAA
GCAGATCTTGTCGGCCTCGGGTACTTCTTCCCTTAAAGTCCACTCGACTA
CAGACCCCGATTTTCCGCTAGTACAGTCTATTGACGGTGCCCATAAAGTT
GGGTGCCATCATGTGGTCACTAACGGAAATGGCTTGAGGGCCGTCAGTAT
CGGATTTGGCGGTGAGATCATGATTTGGTCTTGTCACGACGGAGTCTGGG
CAAAGGATGAGGGGGCCTCTGTCAACAAGGCGACGCCTGCAGATGTCTGG
GCCATCGCTTTATCCGAAGATGGACAATATCTTGCCGGTGTTACGCAAGA
TGGTCATATTAAGGTGTGGGATCTGGACACCAATGGCGAGGAAATCCGAG
ACTATGAAACCAAAGGTAGCTTCGGCACCTGCATAGATTTGTCTGCGGAT
GGCCGCTTCATAGCGAGCGGGCATGAAAATGGTAGTGTTTACATTTTCAG
TACAGAAAGCGGACGCATGCCATTCAGCCTATCAGGCCTGGTTAAACCTG
TACGAGCTGTTGCATTCTCCCCTGGGGGAAAGTTCCTTGCTGCTGCTGGA
GATTCCAAGGTAATTGTGCTTTATGACACGTCCTCTGGTGAACAAGTGGC
AAGTCTCTCGGGGCACACCGCATGGGTCATGTCGCTTTCGTGGAGCCCCA
CGGGGGAGTATCTCCTCAGCGGGTCGTTTGATGGAAAGGTCAAAGTTTGG
TCAATAGACACGAGAGCATGTGTGGCCACCCATTCCGAAACAGAGAAAGC
AATATGGAGTGTCAAGTGGCTAGCGAAGATCGGGAGATCAGTAGGATTTG
CCACGGCGGGTGCAAACCGGAGCATATCATTCTACCGTGAAGCCACTGGT
GGTTAGATGGTTCCCCACCCCGTTGATATCTTCGCACTGGCCGTGACTGA
CAAGCAGATCTTGTCGGCCTCGGGTACTTCTTCCCTTAAAGTCCACTCGA
CTACAGACCCCGATTTTCCGCTAGTACAGTCTATTGACGGTGCCCATAAA
GTTGGGTGCCATCATGTGGTCACTAACGGAAATGGCTTGAGGGCCGTCAG
TATCGGATTTGGCGGTGAGATCATGATTTGGTCTTGTCACGACGGAGTCT
GGGCAAAGGATGAGGGGGCCTCTGTCAACAAGGCGACGCCTGCAGATGTC
TGGGCCATCGCTTTATCCGAAGATGGACAATATCTTGCCGGTGTTACGCA
AGATGGTCATATTAAGGTGTGGGATCTGGACACCAATGGCGAGGAAATCC
GAGACTATGAAACCAAAGGTAGCTTCGGCACCTGCATAGATTTGTCTGCG
GATGGCCGCTTCATAGCGAGCGGGCATGAAAATGGTAGTGTTTACATTTT
CAGTACAGAAAGCGGACGCATGCCATTCAGCCTATCAGGCCTGGTTAAAC
CTGTACGAGCTGTTGCATTCTCCCCTGGGGGAAAGTTCCTTGCTGCTGCT
GGAGATTCCAAGGTAATTGTGCTTTATGACACGTCCTCTGGTGAACAAGT
GGCAAGTCTCTCGGGGCACACCGCATGGGTCATGTCGCTTTCGTGGAGCC
CCACGGGGGAGTATCTCCTCAGCGGGTCGTTTGATGGAAAGGTCAAAGTT
TGGTCAATAGACACGAGAGCATGTGTGGCCACCCATTCCGAAACAGAGAA
AGCAATATGGAGTGTCAAGTGGCTAGCGAAGATCGGGAGATCAGTAGGAT
TTGCCACGGCGGGTGCAAACCGGAGCATATCATTCTACCGTGAAGCCACT
GGTGGTTAGATGGTTCCCCACCCCGTTGATATCTTCGCACTGGCCGTGAC
TGACAAGCAGATCTTGTCGGCCTCGGGTACTTCTTCCCTTAAAGTCCACT
CGACTACAGACCCCGATTTTCCGCTAGTACAGTCTATTGACGGTGCCCAT
AAAGTTGGGTGCCATCATGTGGTCACTAACGGAAATGGCTTGAGGGCCGT
CAGTATCGGATTTGGCGGTGAGATCATGATTTGGTCTTGTCACGACGGAG
TCTGGGCAAAGGATGAGGGGGCCTCTGTCAACAAGGCGACGCCTGCAGAT
GTCTGGGCCATCGCTTTATCCGAAGATGGACAATATCTTGCCGGTGTTAC
GCAAGATGGTCATATTAAGGTGTGGGATCTGGACACCAATGGCGAGGAAA
TCCGAGACTATGAAACCAAAGGTAGCTTCGGCACCTGCATAGATTTGTCT
GCGGATGGCCGCTTCATAGCGAGCGGGCATGAAAATGGTAGTGTTTACAT
TTTCAGTACAGAAAGCGGACGCATGCCATTCAGCCTATCAGGCCTGGTTA
AACCTGTACGAGCTGTTGCATTCTCCCCTGGGGGAAAGTTCCTTGCTGCT
GCTGGAGATTCCAAGGTAATTGTGCTTTATGACACGTCCTCTGGTGAACA
AGTGGCAAGTCTCTCGGGGCACACCGCATGGGTCATGTCGCTTTCGTGGA
GCCCCACGGGGGAGTATCTCCTCAGCGGGTCGTTTGATGGAAAGGTCAAA
GTTTGGTCAATAGACACGAGAGCATGTGTGGCCACCCATTCCGAAACAGA
GAAAGCAATATGGAGTGTCAAGTGGCTAGCGAAGATCGGGAGATCAGTAG
GATTTGCCACGGCGGGTGCAAACCGGAGCATATCATTCTACCGTGAAGCC
ACTGGTGGTTAGATGGTTCCCCACCCCGTTGATATCTTCGCACTGGCCGT
GACTGACAAGCAGATCTTGTCGGCCTCGGGTACTTCTTCCCTTAAAGTCC
ACTCGACTACAGACCCCGATTTTCCGCTAGTACAGTCTATTGACGGTGCC
CATAAAGTTGGGTGCCATCATGTGGTCACTAACGGAAATGGCTTGAGGGC
CGTCAGTATCGGATTTGGCGGTGAGATCATGATTTGGTCTTGTCACGACG
GAGTCTGGGCAAAGGATGAGGGGGCCTCTGTCAACAAGGCGACGCCTGCA
GATGTCTGGGCCATCGCTTTATCCGAAGATGGACAATATCTTGCCGGTGT
TACGCAAGATGGTCATATTAAGGTGTGGGATCTGGACACCAATGGCGAGG
AAATCCGAGACTATGAAACCAAAGGTAGCTTCGGCACCTGCATAGATTTG
TCTGCGGATGGCCGCTTCATAGCGAGCGGGCATGAAAATGGTAGTGTTTA
CATTTTCAGTACAGAAAGCGGACGCATGCCATTCAGCCTATCAGGCCTGG
TTAAACCTGTACGAGCTGTTGCATTCTCCCCTGGGGGAAAGTTCCTTGCT
GCTGCTGGAGATTCCAAGGTAATTGTGCTTTATGACACGTCCTCTGGTGA
ACAAGTGGCAAGTCTCTCGGGGCACACCGCATGGGTCATGTCGCTTTCGT
GGAGCCCCACGGGGGAGTATCTCCTCAGCGGGTCGTTTGATGGAAAGGTC
AAAGTTTGGTCAATAGACACGAGAGCATGTGTGGCCACCCATTCCGAAAC
AGAGAAAGCAATATGGAGTGTCAAGTGGCTAGCGAAGATCGGGAGATCAG
TAGGATTTGCCACGGCGGGTGCAAACCGGAGCATATCATTCTACCGTGAA
GCCACTGGTGGTTAGATGGTTCCCCACCCCGTTGATATCTTCGCACTGGC
CGTGACTGACAAGCAGATCTTGTCGGCCTCGGGTACTTCTTCCCTTAAAG
TCCACTCGACTACAGACCCCGATTTTCCGCTAGTACAGTCTATTGACGGT
GCCCATAAAGTTGGGTGCCATCATGTGGTCACTAACGGAAATGGCTTGAG
GGCCGTCAGTATCGGATTTGGCGGTGAGATCATGATTTGGTCTTGTCACG
ACGGAGTCTGGGCAAAGGATGAGGGGGCCTCTGTCAACAAGGCGACGCCT
GCAGATGTCTGGGCCATCGCTTTATCCGAAGATGGACAATATCTTGCCGG
TGTTACGCAAGATGGTCATATTAAGGTGTGGGATCTGGACACCAATGGCG
AGGAAATCCGAGACTATGAAACCAAAGGTAGCTTCGGCACCTGCATAGAT
TTGTCTGCGGATGGCCGCTTCATAGCGAGCGGGCATGAAAATGGTAGTGT
TTACATTTTCAGTACAGAAAGCGGACGCATGCCATTCAGCCTATCAGGCC
TGGTTAAACCTGTACGAGCTGTTGCATTCTCCCCTGGGGGAAAGTTCCTT
GCTGCTGCTGGAGATTCCAAGGTAATTGTGCTTTATGACACGTCCTCTGG
TGAACAAGTGGCAAGTCTCTCGGGGCACACCGCATGGGTCATGTCGCTTT
CGTGGAGCCCCACGGGGGAGTATCTCCTCAGCGGGTCGTTTGATGGAAAG
GTCAAAGTTTGGTCAATAGACACGAGAGCATGTGTGGCCACCCATTCCGA
AACAGAGAAAGCAATATGGAGTGTCAAGTGGCTAGCGAAGATCGGGAGAT
CAGTAGGATTTGCCACGGCGGGTGCAAACCGGAGCATATCATTCTACCGT
GAAGCCACTGGTGGTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | PFAM:PF00400 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:49150..50337 + |
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