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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:50577..51411- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004954-T1 ID=CBS51388_004954-T1|Name=CBS51388_004954-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=835bp|location=Sequence derived from alignment at An08:50577..51411- (Aspergillus niger CBS 513.88)
ATGAGCTCGTCTTTTGATCCGTCGCTCTCGACAAGTGGCATGCGCCCGCC
TCTCACGTCGGCCGATGCACCGTCCATGGCCGATTCACTCCCCAGTATCA
ACTTCGGATTTGAAGATCTCCGAAATCGCATGGCACAGTTCACTGCTCGC
TTTGACGCTTTCATTGAGAGAGGCCGCAAGCAGGTATTGGAGGAGAGGAA
CCAGTTCAAGATTGGACTGGCAGAGCTACAGGGTAAGCTATCGCTTTATG
GAGATGGCGCAAGAGCATCGGACTAACTCAGGTCCTGTAGAGGATGAACG
CATGAAGCAAAGGGACATCGAGATCCTGGATCTTAAATCGCAAACGCATC
AGCAAACACTACAGAAGGAAGCCGCTGAAGCAGCGGAAATGCACGCCGCC
ATCTCATCCGTGACCCTGGAGCGCGACTCCCGCCTCGCCAAGCGCGACCG
CCTCAAGCAACAAATTGACGAGACCCAAAAGGCGATTAACCAGAAGCTGG
AGGCACAGAAGATGCACGCCAGATATCTGGATGCTCAGGCTCGGCTGAAC
GTGCCGGAATTGGACTTTTGGCAGGACTATCTGTGTTTACGCATTGAGGG
AGCCGGACGAGAGGATCGACTGAAGTTTGTTTACACCCATTTGCTCGAAA
AAGACTGGGAAGCGGAAGCGTGGTTTGAACTCGGAACAGGGAGCCGCGAT
TACGCAGTATTTCATACACGACCGAAACTCGATCGGGAGGCTCTCGAGCG
TGAGCTCGATATCGTCAATGAGGATCGCGATTTCGGTGCGTTCTTGAAAA
GAATGCGGAAGTTGTTCGTCGATACCATGAAATAG back to topCoding sequence (CDS) from alignment at An08:50577..51411- >CBS51388_004954-T1 ID=CBS51388_004954-T1|Name=CBS51388_004954-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1554bp|location=Sequence derived from alignment at An08:50577..51411- (Aspergillus niger CBS 513.88)
AGGATGAACGCATGAAGCAAAGGGACATCGAGATCCTGGATCTTAAATCG
CAAACGCATCAGCAAACACTACAGAAGGAAGCCGCTGAAGCAGCGGAAAT
GCACGCCGCCATCTCATCCGTGACCCTGGAGCGCGACTCCCGCCTCGCCA
AGCGCGACCGCCTCAAGCAACAAATTGACGAGACCCAAAAGGCGATTAAC
CAGAAGCTGGAGGCACAGAAGATGCACGCCAGATATCTGGATGCTCAGGC
TCGGCTGAACGTGCCGGAATTGGACTTTTGGCAGGACTATCTGTGTTTAC
GCATTGAGGGAGCCGGACGAGAGGATCGACTGAAGTTTGTTTACACCCAT
TTGCTCGAAAAAGACTGGGAAGCGGAAGCGTGGTTTGAACTCGGAACAGG
GAGCCGCGATTACGCAGTATTTCATACACGACCGAAACTCGATCGGGAGG
CTCTCGAGCGTGAGCTCGATATCGTCAATGAGGATCGCGATTTCGGTGCG
TTCTTGAAAAGAATGCGGAAGTTGTTCGTCGATACCATGAAATAGATGAG
CTCGTCTTTTGATCCGTCGCTCTCGACAAGTGGCATGCGCCCGCCTCTCA
CGTCGGCCGATGCACCGTCCATGGCCGATTCACTCCCCAGTATCAACTTC
GGATTTGAAGATCTCCGAAATCGCATGGCACAGTTCACTGCTCGCTTTGA
CGCTTTCATTGAGAGAGGCCGCAAGCAGGTATTGGAGGAGAGGAACCAGT
TCAAGATTGGACTGGCAGAGCTACAGGAGGATGAACGCATGAAGCAAAGG
GACATCGAGATCCTGGATCTTAAATCGCAAACGCATCAGCAAACACTACA
GAAGGAAGCCGCTGAAGCAGCGGAAATGCACGCCGCCATCTCATCCGTGA
CCCTGGAGCGCGACTCCCGCCTCGCCAAGCGCGACCGCCTCAAGCAACAA
ATTGACGAGACCCAAAAGGCGATTAACCAGAAGCTGGAGGCACAGAAGAT
GCACGCCAGATATCTGGATGCTCAGGCTCGGCTGAACGTGCCGGAATTGG
ACTTTTGGCAGGACTATCTGTGTTTACGCATTGAGGGAGCCGGACGAGAG
GATCGACTGAAGTTTGTTTACACCCATTTGCTCGAAAAAGACTGGGAAGC
GGAAGCGTGGTTTGAACTCGGAACAGGGAGCCGCGATTACGCAGTATTTC
ATACACGACCGAAACTCGATCGGGAGGCTCTCGAGCGTGAGCTCGATATC
GTCAATGAGGATCGCGATTTCGGTGCGTTCTTGAAAAGAATGCGGAAGTT
GTTCGTCGATACCATGAAATAGATGAGCTCGTCTTTTGATCCGTCGCTCT
CGACAAGTGGCATGCGCCCGCCTCTCACGTCGGCCGATGCACCGTCCATG
GCCGATTCACTCCCCAGTATCAACTTCGGATTTGAAGATCTCCGAAATCG
CATGGCACAGTTCACTGCTCGCTTTGACGCTTTCATTGAGAGAGGCCGCA
AGCAGGTATTGGAGGAGAGGAACCAGTTCAAGATTGGACTGGCAGAGCTA
CAGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013255 |
| DBxref | PFAM:PF08234 |
| Product | kinetochore-associated Ndc80 complex subunit spc25 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:50577..51411 - |
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