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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:65026..68001+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004959-T1 ID=CBS51388_004959-T1|Name=CBS51388_004959-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2976bp|location=Sequence derived from alignment at An08:65026..68001+ (Aspergillus niger CBS 513.88)
ATGATCCGTCGCAATTCAGACATCGAGGTCCAGCTCCCGGATGCCGGTAG
TACCGTCGTCTCCGAACCTTCGAACAACCCGGATGTAGAGATGTCATCGG
ACGAACCTACCCTTCCTCTGAGCCTCCCTGCCCACCTCGCCGCTCGCTTT
GCCCGGAAACCCAGCGTGATCCGTCGCTCATCAGCAGCCTCATCCCGTCG
AAGCTCAATATCGTCTCTTCATTCGCAACACTCGCATGCGTCGGTTCATG
GCGCATCTTCTACCGATCACGCAGCGCAGCATCTCCGGCGGACCTCTATT
CTTGAAAGCCGCAAGGCACGGCTTGCCGACCGCGCATTACACGCAGAAAA
GGTGAGGCTGCGTGCTGCCCTTGCGAAAGCTGCTACACGCAATTTGCAAA
GGGAGGAACGGGCTTTAGCTGCCCAGCAAGCTCGGGAACGGTTACTGGCT
GAAATTACTGCCAAGTGCGAGGAGGAAGTCCGCCGGGCGAAGAAGAAAGC
CGAAGACAACCGGGAAAGGAAGGCTGCTGAGCACGCTCGGCTTCGCTTAG
AGATCGCCGAGAAGTTCGCAGAGGTAGAGAAGAGGCGGATGCTATACCAA
CAGAGCCAACGGCGCCACCGCACCAGTAGCCTGCATTCTACGGACGAGAA
GAAGATGTCAAAGACCTCAGCGAGTCTCATAACGCGGGATGCAGCAGCAA
GAACGATTCAACGCGCATGGAGAACATACCATTCCAAAAAGGTCATGCGA
GAGTTTCTTGGCCTAGACCTGACGACCAGTCACATCCATGACATGACCTT
TGAGGATGTAGGTACCCTTCTATCGGCGGAGCCAGTCTTGAATACTACGG
CCCGCGTCCTTCGACTCTGCGGGCTGCAAGACATGGAAAGCGGCACCATG
GGTGGTCGGGGCGCTGTGCGCACGTTTCTGAGCAGCTACTTGATTGTCAC
TCATCCTACGGAGGTTCTGAGCAGCAACGGAGAACAGGAACAGGACCTGA
TTGCCAAAGCACGGGAGCTCCTCGTGGCGTTCGAGCAAGTTACTCCTCTG
CTCTCCTCCGGCTGCTGCTCGCCTCTGTCCATTTCCACCGAGCTCCAGGT
GCTGTGTGAGGCATACAGTGTCTTTTTCTCTGCGTTCCATGCGTGGAAGA
CGCATGATTCCAGTGTTCTGATTGAAATCATGCTGGCTCAGTTTATTGAG
CTGGAGCTGATCTGGCAGACAGTCAAGGATGATCGCGCCGGTGGTGTGGC
CGACGATTATCGGCAGGGGATTAGACAGAACCAGATTTTGCTCCTTGCCA
GGCTGAAGCGTCTGGCAGGGTCTGATCGGGCCATGCAGATGGTGCGCGAC
GCCTTGAAGAAGGCCAAGCGTGAGAAGAAACGTACTGCCGCTAAGAAGCA
AGCTATCCCGCGGTCAGCGGAAGTTGCACCCTCCACCGAAGCTCTTACTG
AGAGTGTTGCGTCTCCCATCAGTGAGACATTCAACAACGTGGATAGCGCA
GTCTTGAAAGAACTAGACAAACAGCGGATTTCACCTCATGAACGGTTCAC
CCGGATTCTTACTGCCCTTCCGGAGAACCGGGCGCTGGTTCATGAGCTCC
TCATCAACAAGGCGTTCAAGATTGATGAGGAACAATATACGGAGCCGCGC
AGGCGGATAATGCAGCATATGTGCGAAATGATGCGCAGAGATGTAGATGA
CGGTCTGGGCACGAATTGGACGGTCGCTATGGCTACTGTGATTCAGGATC
GATTACTGCGTTCTCTTCGGCCCGGCAATTCGCTCCACGTATTGATCAGC
GAAGTGCTGGACCCCAAACTAATCGAGAATCAGTGCAAGGCTGGCGCTTT
CTCGTACGATAAATTCTTCGAGTTCATGAATACCATTCTTCCGAAGCTCT
GCGCTCCTTATCGCGACCCTGTGGTCAAGGCCTTTGTCGAGGATACGTCC
GGGGATGCGATCGATCGCCTAGCAAGACTTATGGGAATTATCGATCTCCT
GTCTCTTGATCACACCAATTTCATGATCCAGATGGCGGCGCCGCAGCTCA
TCCAGGAGGCGCCTGGCTACGAACAGAGAACGTTCGAGAAAGGTCTCCAA
GATGGCTCTCTGAGCCTGGGAAAGACCCGCCGTTTCTGGCGGACGTACCG
AAAGGTTCTCGCAGATGAGATGCGGAAGCGTGATCCGGAGAACATTAATG
GCGAGCCGCAGCCCCCTATGGCAAAGGTCTACGCGCAAGGATTGGTGGAT
CTGGTGCTGAGCAACGCCCCCGTGTCCGACGAGCTGATTCCTGAGACCCT
GGAGTTGGATCGCCAGCGGCTTGGGCGGCTACATTCTCAGGCATTTCGGA
TCGTTGCCACGGCGTCCATACTCCTAACGGCCAAGAACCTGCTCAAACGT
GACGTGCGGTCTCAGTGGAAGGCCGAGGCGGACCGAATCCTGTCCCTCGA
CTTCAATGAGATCCAACCTGATCGGGTCCAGTCCATCTTAGAGTCTACCC
ACCCAATGCCTCCTAGTGCGAGCGCCCAATTGGCAGCCACCATTCGACGA
GTGCTGGCGCCAGTAGGTGCCGCCTGCGCCGCTGCCGTACCGGCGGGAGT
GACGCAGACAACAGTCGAGATTCAAACAGAACCAGACCCGTCGGGACCGT
CGGCTGCCTCCTCATCTACCGTGTCTGAACCTGCAGGATCCATTGGCTCT
GCAGGATCGAGCGGGAGCGCGACCAATGCTGCCAGCTTTACGGACCCGGT
GGCGCGGTTGATCTTGTCGCGTCTACGAGCTCACATTCTCTCTCGTCTGA
GCGCGTCTAGCGCCAGTGAGAGGGTGCGGGCCACCACTACGGCTAGCCAA
AGTCTGGCAGGAGCTGGTATGCCCGAGTTCGTGACAGAGGTCGGGCAATT
GACCGAGGAGTTGGAGAAGATGCGTGAAGTGGACTGGTTATGTCATGGCA
TGATCTACGATCGCATCTTGGCCTAG back to topCoding sequence (CDS) from alignment at An08:65026..68001+ >CBS51388_004959-T1 ID=CBS51388_004959-T1|Name=CBS51388_004959-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2976bp|location=Sequence derived from alignment at An08:65026..68001+ (Aspergillus niger CBS 513.88)
ATGATCCGTCGCAATTCAGACATCGAGGTCCAGCTCCCGGATGCCGGTAG
TACCGTCGTCTCCGAACCTTCGAACAACCCGGATGTAGAGATGTCATCGG
ACGAACCTACCCTTCCTCTGAGCCTCCCTGCCCACCTCGCCGCTCGCTTT
GCCCGGAAACCCAGCGTGATCCGTCGCTCATCAGCAGCCTCATCCCGTCG
AAGCTCAATATCGTCTCTTCATTCGCAACACTCGCATGCGTCGGTTCATG
GCGCATCTTCTACCGATCACGCAGCGCAGCATCTCCGGCGGACCTCTATT
CTTGAAAGCCGCAAGGCACGGCTTGCCGACCGCGCATTACACGCAGAAAA
GGTGAGGCTGCGTGCTGCCCTTGCGAAAGCTGCTACACGCAATTTGCAAA
GGGAGGAACGGGCTTTAGCTGCCCAGCAAGCTCGGGAACGGTTACTGGCT
GAAATTACTGCCAAGTGCGAGGAGGAAGTCCGCCGGGCGAAGAAGAAAGC
CGAAGACAACCGGGAAAGGAAGGCTGCTGAGCACGCTCGGCTTCGCTTAG
AGATCGCCGAGAAGTTCGCAGAGGTAGAGAAGAGGCGGATGCTATACCAA
CAGAGCCAACGGCGCCACCGCACCAGTAGCCTGCATTCTACGGACGAGAA
GAAGATGTCAAAGACCTCAGCGAGTCTCATAACGCGGGATGCAGCAGCAA
GAACGATTCAACGCGCATGGAGAACATACCATTCCAAAAAGGTCATGCGA
GAGTTTCTTGGCCTAGACCTGACGACCAGTCACATCCATGACATGACCTT
TGAGGATGTAGGTACCCTTCTATCGGCGGAGCCAGTCTTGAATACTACGG
CCCGCGTCCTTCGACTCTGCGGGCTGCAAGACATGGAAAGCGGCACCATG
GGTGGTCGGGGCGCTGTGCGCACGTTTCTGAGCAGCTACTTGATTGTCAC
TCATCCTACGGAGGTTCTGAGCAGCAACGGAGAACAGGAACAGGACCTGA
TTGCCAAAGCACGGGAGCTCCTCGTGGCGTTCGAGCAAGTTACTCCTCTG
CTCTCCTCCGGCTGCTGCTCGCCTCTGTCCATTTCCACCGAGCTCCAGGT
GCTGTGTGAGGCATACAGTGTCTTTTTCTCTGCGTTCCATGCGTGGAAGA
CGCATGATTCCAGTGTTCTGATTGAAATCATGCTGGCTCAGTTTATTGAG
CTGGAGCTGATCTGGCAGACAGTCAAGGATGATCGCGCCGGTGGTGTGGC
CGACGATTATCGGCAGGGGATTAGACAGAACCAGATTTTGCTCCTTGCCA
GGCTGAAGCGTCTGGCAGGGTCTGATCGGGCCATGCAGATGGTGCGCGAC
GCCTTGAAGAAGGCCAAGCGTGAGAAGAAACGTACTGCCGCTAAGAAGCA
AGCTATCCCGCGGTCAGCGGAAGTTGCACCCTCCACCGAAGCTCTTACTG
AGAGTGTTGCGTCTCCCATCAGTGAGACATTCAACAACGTGGATAGCGCA
GTCTTGAAAGAACTAGACAAACAGCGGATTTCACCTCATGAACGGTTCAC
CCGGATTCTTACTGCCCTTCCGGAGAACCGGGCGCTGGTTCATGAGCTCC
TCATCAACAAGGCGTTCAAGATTGATGAGGAACAATATACGGAGCCGCGC
AGGCGGATAATGCAGCATATGTGCGAAATGATGCGCAGAGATGTAGATGA
CGGTCTGGGCACGAATTGGACGGTCGCTATGGCTACTGTGATTCAGGATC
GATTACTGCGTTCTCTTCGGCCCGGCAATTCGCTCCACGTATTGATCAGC
GAAGTGCTGGACCCCAAACTAATCGAGAATCAGTGCAAGGCTGGCGCTTT
CTCGTACGATAAATTCTTCGAGTTCATGAATACCATTCTTCCGAAGCTCT
GCGCTCCTTATCGCGACCCTGTGGTCAAGGCCTTTGTCGAGGATACGTCC
GGGGATGCGATCGATCGCCTAGCAAGACTTATGGGAATTATCGATCTCCT
GTCTCTTGATCACACCAATTTCATGATCCAGATGGCGGCGCCGCAGCTCA
TCCAGGAGGCGCCTGGCTACGAACAGAGAACGTTCGAGAAAGGTCTCCAA
GATGGCTCTCTGAGCCTGGGAAAGACCCGCCGTTTCTGGCGGACGTACCG
AAAGGTTCTCGCAGATGAGATGCGGAAGCGTGATCCGGAGAACATTAATG
GCGAGCCGCAGCCCCCTATGGCAAAGGTCTACGCGCAAGGATTGGTGGAT
CTGGTGCTGAGCAACGCCCCCGTGTCCGACGAGCTGATTCCTGAGACCCT
GGAGTTGGATCGCCAGCGGCTTGGGCGGCTACATTCTCAGGCATTTCGGA
TCGTTGCCACGGCGTCCATACTCCTAACGGCCAAGAACCTGCTCAAACGT
GACGTGCGGTCTCAGTGGAAGGCCGAGGCGGACCGAATCCTGTCCCTCGA
CTTCAATGAGATCCAACCTGATCGGGTCCAGTCCATCTTAGAGTCTACCC
ACCCAATGCCTCCTAGTGCGAGCGCCCAATTGGCAGCCACCATTCGACGA
GTGCTGGCGCCAGTAGGTGCCGCCTGCGCCGCTGCCGTACCGGCGGGAGT
GACGCAGACAACAGTCGAGATTCAAACAGAACCAGACCCGTCGGGACCGT
CGGCTGCCTCCTCATCTACCGTGTCTGAACCTGCAGGATCCATTGGCTCT
GCAGGATCGAGCGGGAGCGCGACCAATGCTGCCAGCTTTACGGACCCGGT
GGCGCGGTTGATCTTGTCGCGTCTACGAGCTCACATTCTCTCTCGTCTGA
GCGCGTCTAGCGCCAGTGAGAGGGTGCGGGCCACCACTACGGCTAGCCAA
AGTCTGGCAGGAGCTGGTATGCCCGAGTTCGTGACAGAGGTCGGGCAATT
GACCGAGGAGTTGGAGAAGATGCGTGAAGTGGACTGGTTATGTCATGGCA
TGATCTACGATCGCATCTTGGCCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008862 |
| DBxref | PFAM:PF05794 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:65026..68001 + |
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