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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:176505..177445- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005004-T1 ID=CBS51388_005004-T1|Name=CBS51388_005004-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=941bp|location=Sequence derived from alignment at An08:176505..177445- (Aspergillus niger CBS 513.88)
ATGTCCTCCGTCACGAGTTCCCACCGCCTTTCCGCGCGGAAGTCCGGCCA
TCGTTCCGCCGCAGCTCCTGCTTCAATTCGCAACACACCTTCTGTCCGTC
CAGCCTCGCAACCTCATCGTCGCTCTCTGCCATCGCAGCAGACTTCTAGG
GCTTCACCAGCCTCTTCCCGTCAGCCCAGCACTGGCCATGTGTCGAGTCA
GCTCGCTTCTGCTTGGCCGTTCAATCCCCAGGAAACAGAACTAATCCGCG
CCGGATACCGTCCCGCCTTCAAACCGAAACCCGTCGCCGCAGCGGACGAA
CAGTCCTCGACCAACAAAAACAGCAATAGAAAAGGGCCCAATAAGAAGAA
TAATATGGCGGAACCACGAGCCCGTGCCGCTAGGCACAAGGGTCAGATGA
ACTTTGCATCTGAACGTACGTCTGTCGCCGTCGATATGTAAATCGATAGC
TGGACCTATAGTTCTGGTTGCTAACATGAACCCTCACATCAGTCCGCCTC
CTCCTTCTTGCCTATGGTGACCCCCGTCCGCACCCTTCGTTTCCCGCCGA
ACCACTCCCCGAAACCATCCGTGTTCTGGACGAGATTGTCACCGACTTCG
TTCTCGAAATGTGTCACGGTGCGGCCCAGTACGCCAGCTACTCCCGCCGG
CAGAAGATCAAGGTCGATGACTTCCGGTTTGCGCTGCGCCGGGATCCCAA
CAAGCTTGGTCGTGTGCAGGAACTTCTTCGCATGGAGCGTGAGCTGAAAG
AGGCTCGTAAGGCATTTGATCAGAATGACGATCAGGTCGGGAACTTGAAG
GATGCGGGCAAGAAGGGTCTTGAGGAACTTGGCGAAAGTGTTGATGGGAA
GAAGAGTAAGGGCAAGGGGAAGAGAAATGCAAGAAGGGATTCGGATGCCA
CGGAGGATACGGCGCCGAAGAAGAGAAAAGTTGTGGGATGA back to topCoding sequence (CDS) from alignment at An08:176505..177445- >CBS51388_005004-T1 ID=CBS51388_005004-T1|Name=CBS51388_005004-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1728bp|location=Sequence derived from alignment at An08:176505..177445- (Aspergillus niger CBS 513.88)
TCCGCCTCCTCCTTCTTGCCTATGGTGACCCCCGTCCGCACCCTTCGTTT
CCCGCCGAACCACTCCCCGAAACCATCCGTGTTCTGGACGAGATTGTCAC
CGACTTCGTTCTCGAAATGTGTCACGGTGCGGCCCAGTACGCCAGCTACT
CCCGCCGGCAGAAGATCAAGGTCGATGACTTCCGGTTTGCGCTGCGCCGG
GATCCCAACAAGCTTGGTCGTGTGCAGGAACTTCTTCGCATGGAGCGTGA
GCTGAAAGAGGCTCGTAAGGCATTTGATCAGAATGACGATCAGGTCGGGA
ACTTGAAGGATGCGGGCAAGAAGGGTCTTGAGGAACTTGGCGAAAGTGTT
GATGGGAAGAAGAGTAAGGGCAAGGGGAAGAGAAATGCAAGAAGGGATTC
GGATGCCACGGAGGATACGGCGCCGAAGAAGAGAAAAGTTGTGGGATGAA
TGTCCTCCGTCACGAGTTCCCACCGCCTTTCCGCGCGGAAGTCCGGCCAT
CGTTCCGCCGCAGCTCCTGCTTCAATTCGCAACACACCTTCTGTCCGTCC
AGCCTCGCAACCTCATCGTCGCTCTCTGCCATCGCAGCAGACTTCTAGGG
CTTCACCAGCCTCTTCCCGTCAGCCCAGCACTGGCCATGTGTCGAGTCAG
CTCGCTTCTGCTTGGCCGTTCAATCCCCAGGAAACAGAACTAATCCGCGC
CGGATACCGTCCCGCCTTCAAACCGAAACCCGTCGCCGCAGCGGACGAAC
AGTCCTCGACCAACAAAAACAGCAATAGAAAAGGGCCCAATAAGAAGAAT
AATATGGCGGAACCACGAGCCCGTGCCGCTAGGCACAAGGGTCAGATGAA
CTTTGCATCTGAACTCCGCCTCCTCCTTCTTGCCTATGGTGACCCCCGTC
CGCACCCTTCGTTTCCCGCCGAACCACTCCCCGAAACCATCCGTGTTCTG
GACGAGATTGTCACCGACTTCGTTCTCGAAATGTGTCACGGTGCGGCCCA
GTACGCCAGCTACTCCCGCCGGCAGAAGATCAAGGTCGATGACTTCCGGT
TTGCGCTGCGCCGGGATCCCAACAAGCTTGGTCGTGTGCAGGAACTTCTT
CGCATGGAGCGTGAGCTGAAAGAGGCTCGTAAGGCATTTGATCAGAATGA
CGATCAGGTCGGGAACTTGAAGGATGCGGGCAAGAAGGGTCTTGAGGAAC
TTGGCGAAAGTGTTGATGGGAAGAAGAGTAAGGGCAAGGGGAAGAGAAAT
GCAAGAAGGGATTCGGATGCCACGGAGGATACGGCGCCGAAGAAGAGAAA
AGTTGTGGGATGAATGTCCTCCGTCACGAGTTCCCACCGCCTTTCCGCGC
GGAAGTCCGGCCATCGTTCCGCCGCAGCTCCTGCTTCAATTCGCAACACA
CCTTCTGTCCGTCCAGCCTCGCAACCTCATCGTCGCTCTCTGCCATCGCA
GCAGACTTCTAGGGCTTCACCAGCCTCTTCCCGTCAGCCCAGCACTGGCC
ATGTGTCGAGTCAGCTCGCTTCTGCTTGGCCGTTCAATCCCCAGGAAACA
GAACTAATCCGCGCCGGATACCGTCCCGCCTTCAAACCGAAACCCGTCGC
CGCAGCGGACGAACAGTCCTCGACCAACAAAAACAGCAATAGAAAAGGGC
CCAATAAGAAGAATAATATGGCGGAACCACGAGCCCGTGCCGCTAGGCAC
AAGGGTCAGATGAACTTTGCATCTGAAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046982 | protein heterodimerization activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006366 | transcription by RNA polymerase II |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009072 |
| DBxref | InterPro:IPR003195 |
| DBxref | PFAM:PF02269 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:176505..177445 - |
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