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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:184101..186655+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005008-T1 ID=CBS51388_005008-T1|Name=CBS51388_005008-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2555bp|location=Sequence derived from alignment at An08:184101..186655+ (Aspergillus niger CBS 513.88)
ATGGCATCCAAGAGTTCCACAAGAGACGAGCATCGTCTTTCCTTTGCAAA
GGTAGGTGCTGCGTTGCTGGTCGGCCAACGGCGGGCTCTTGCTGACCCGC
TTGAGCAGATTGCGGCCATGCCTCCGCCATCAAATCCGGAAGCCCCCGTA
TCATCTGACGAATTGAACGGCCCACAGTCCGTCGACAACCCATCATCATG
TTCCGAACAACGTGGCTCGGAAAATGTCCCCTCCAACCAGGGAGATCCGA
CCCCTGTCCGAAACGAGGCTGCCGCTGATGATCGAAACGTCGACAGTTTA
TCTCAGGCCGTGCATGGTGTCAGCATCGATGACAGAAAGTACCACGACGG
TCCTGTGTTCTCCACTGAGGCTGCAGACAACGGTTCTCTGAAACGAGAGA
ACTCGTTTGAGGACGATCGTACCCATCTTTCCAACTCCTCTACCAAGCCC
ACGAGCTTCGACTCTAAGAGCATGGCTTCTGTGACGACATTCGCAATGGA
CGAAAAAGATTCTTTGCGTCCGGATGACAGTGCGAGCGTTCAGGCTATTG
ATGAGGAGGAGTCTCTATCTGGGCACGCTTCCGGTGCCCCCAATTCATTG
ACAGGGTCAGAGTCAGGTGCCCGCGGATTCATACAGAGACCTCGGGGAAT
CCTCCAGCCGACGGTACCTATCTTCAATGATGGTATACAGCGCACGAATG
GTGCCATGCTGCCAGACACTGTCGCCAACAATTACGCGAACGCCGATGCT
TTCCAAGCAGGACGGCCTATACATGGGTTCCCGTCAGAGCCCGACGAGAA
ACTCCTCGAGGCTATGAAGTCCCCCAAAGACCGCCTCTTGATTCTTCAAC
TGGAAGAAAAGGTCCGATACTTTATACAAAATTCTAAGTAAGTCGGCCCA
CCGTGCTGCCTTCGTGGTCCTGAGTTTAATATTCTGACGATTTCCTAGGG
AGCACTCTTTGGAACTCCCGCCTTCGAACGCTTTTGGGCGGCTCCTTGCA
CACAAGCTGGGCGATTACTACCATCTGACGCACTTCGTTGACAATAACGT
CACGTCCGTCCGGCTTCACCGGACGCCTTTTTGTCGGCTGTAAGTCTGCG
CTGCGATGCTCACTTCTTTTATAGTTGACTTGTGCTAACCTTTGTAGCCC
CACGCCTCTCTCAGTTCTCCACGCTGCGACTAATAGTACTCCGCCTCCCG
CCATGCCTGCCATGAAGATCATGCGCCGTACTGATAGTGAGCGGCCTTCC
ACCGAGGGTAGCATCGCGGCAAGCTCCTCCGCTCCGTCTAAGAACGGGTC
CGAAGCGGGGGACAGTGGAAATGACGGGGAAAGGGGATCTACCCCGGCAA
AGGACAGGTTGACCTTGACCCGCGAAGAGAGGGAAGCCAAGTACCAGGAA
GCTAGGGAGCGGATTTTCCGTGATTTTACCGAGTCGAAAAGTTCCGAGAA
CGCCAATGGCGATTCCGGTACCAATATGTCACGCTCGAGCTCAACAAGTG
GACGCAAAAAGGCGCACCGACAGAAAACTCCTCACGATGACAGTTTTGAG
GTTCGATCTCAGTTCAACGCGTATTATCCAGGAATGCCTTATGCCAACGG
ACCCATGCCCTACGGCATGCCTGTCAATGACCCGTCTTTTCCAACCCAAC
CTTGCATGGTGGGACCCGGTGTGTCGCCCCCTACTATGGGCTACGGTCAT
GGTGGCCAGGCTAGTCCAATGTATTCTGGGCCCGTGAACTTGAATGCTAT
GCCGCATTATTCGATGCCTGTGTCGCCTCAGATGACTCCTAGTGGCCCAT
GGCAGAATGGCCCTGTGCCACAACAGTCCCCCTACTCTGGTTATGCGACC
ATCAACCAGTCGCCCGCGATGGCATCCACTAAGTCGTCTCCTGCATTGGG
CAGTTATCCTATGCCAAACTCCGTCCAATATCAACCCAATCCTGGTTGGT
CCACGCCACCTTATGCCGGCGGCTATCCACAACCATCACATCGCAATCCT
CCCCCATCGGGATGGGCCGGCTATCAAACGCAGCCTCCTACACCAACTTC
TTATCCTTATGCTCAGTATCCCGGACAGCCCATGAGTCCGGGCATGCAGG
GTCACGGCGGTGCTCACCCTTTGCCCGGAAGCTTCAATAGGTCGCCTTTC
AATCCACAGACCCGCTCGTTTGTCCCTGGTGGTGCGGCGTTAGCACGGCA
CCCCAGCAAGGGCAACCAGCATGGTATGAACCCATATCCCGGTATGCAAC
CGGGTATGCAGCCCCAGTGGTCCGGATTTCAAGATATGAACAGCAAGGCT
CAAGACATGCCTGGTTCAGTTGGACATGGCCCGACCCGCGGTGGGCCTTC
GGGAAGCAGAGACTCTATTGCGAAATGGGGGACACCGTCACACCTGCCAC
CCAAGCCACCACCGTCCGAGGTGCCTTCTGACTTTGACTTGAAACCGCGC
AGTGGGCCCAGCTCGACGCATCCTTACTCAGGCAACACGCTCCCCGCCAC
CAAGAACGGGCCGCTTGTTGTTTCTGGCGGAGCAAGTCTGCCACGGGTAA
ATTAA back to topCoding sequence (CDS) from alignment at An08:184101..186655+ >CBS51388_005008-T1 ID=CBS51388_005008-T1|Name=CBS51388_005008-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7308bp|location=Sequence derived from alignment at An08:184101..186655+ (Aspergillus niger CBS 513.88)
ATGGCATCCAAGAGTTCCACAAGAGACGAGCATCGTCTTTCCTTTGCAAA
GGTAGGTGCTGCGTTGCTGGTCGGCCAACGGCGGGCTCTTGCTGACCCGC
TTGAGCAGATTGCGGCCATGCCTCCGCCATCAAATCCGGAAGCCCCCGTA
TCATCTGACGAATTGAACGGCCCACAGTCCGTCGACAACCCATCATCATG
TTCCGAACAACGTGGCTCGGAAAATGTCCCCTCCAACCAGGGAGATCCGA
CCCCTGTCCGAAACGAGGCTGCCGCTGATGATCGAAACGTCGACAGTTTA
TCTCAGGCCGTGCATGGTGTCAGCATCGATGACAGAAAGTACCACGACGG
TCCTGTGTTCTCCACTGAGGCTGCAGACAACGGTTCTCTGAAACGAGAGA
ACTCGTTTGAGGACGATCGTACCCATCTTTCCAACTCCTCTACCAAGCCC
ACGAGCTTCGACTCTAAGAGCATGGCTTCTGTGACGACATTCGCAATGGA
CGAAAAAGATTCTTTGCGTCCGGATGACAGTGCGAGCGTTCAGGCTATTG
ATGAGGAGGAGTCTCTATCTGGGCACGCTTCCGGTGCCCCCAATTCATTG
ACAGGGTCAGAGTCAGGTGCCCGCGGATTCATACAGAGACCTCGGGGAAT
CCTCCAGCCGACGGTACCTATCTTCAATGATGGTATACAGCGCACGAATG
GTGCCATGCTGCCAGACACTGTCGCCAACAATTACGCGAACGCCGATGCT
TTCCAAGCAGGACGGCCTATACATGGGTTCCCGTCAGAGCCCGACGAGAA
ACTCCTCGAGGCTATGAAGTCCCCCAAAGACCGCCTCTTGATTCTTCAAC
TGGAAGAAAAGGTCCGATACTTTATACAAAATTCTAAGGAGCACTCTTTG
GAACTCCCGCCTTCGAACGCTTTTGGGCGGCTCCTTGCACACAAGCTGGG
CGATTACTACCATCTGACGCACTTCGTTGACAATAACGTCACGTCCGTCC
GGCTTCACCGGACGCCTTTTTGTCGGCTCCCCACGCCTCTCTCAGTTCTC
CACGCTGCGACTAATAGTACTCCGCCTCCCGCCATGCCTGCCATGAAGAT
CATGCGCCGTACTGATAGTGAGCGGCCTTCCACCGAGGGTAGCATCGCGG
CAAGCTCCTCCGCTCCGTCTAAGAACGGGTCCGAAGCGGGGGACAGTGGA
AATGACGGGGAAAGGGGATCTACCCCGGCAAAGGACAGGTTGACCTTGAC
CCGCGAAGAGAGGGAAGCCAAGTACCAGGAAGCTAGGGAGCGGATTTTCC
GTGATTTTACCGAGTCGAAAAGTTCCGAGAACGCCAATGGCGATTCCGGT
ACCAATATGTCACGCTCGAGCTCAACAAGTGGACGCAAAAAGGCGCACCG
ACAGAAAACTCCTCACGATGACAGTTTTGAGGTTCGATCTCAGTTCAACG
CGTATTATCCAGGAATGCCTTATGCCAACGGACCCATGCCCTACGGCATG
CCTGTCAATGACCCGTCTTTTCCAACCCAACCTTGCATGGTGGGACCCGG
TGTGTCGCCCCCTACTATGGGCTACGGTCATGGTGGCCAGGCTAGTCCAA
TGTATTCTGGGCCCGTGAACTTGAATGCTATGCCGCATTATTCGATGCCT
GTGTCGCCTCAGATGACTCCTAGTGGCCCATGGCAGAATGGCCCTGTGCC
ACAACAGTCCCCCTACTCTGGTTATGCGACCATCAACCAGTCGCCCGCGA
TGGCATCCACTAAGTCGTCTCCTGCATTGGGCAGTTATCCTATGCCAAAC
TCCGTCCAATATCAACCCAATCCTGGTTGGTCCACGCCACCTTATGCCGG
CGGCTATCCACAACCATCACATCGCAATCCTCCCCCATCGGGATGGGCCG
GCTATCAAACGCAGCCTCCTACACCAACTTCTTATCCTTATGCTCAGTAT
CCCGGACAGCCCATGAGTCCGGGCATGCAGGGTCACGGCGGTGCTCACCC
TTTGCCCGGAAGCTTCAATAGGTCGCCTTTCAATCCACAGACCCGCTCGT
TTGTCCCTGGTGGTGCGGCGTTAGCACGGCACCCCAGCAAGGGCAACCAG
CATGGTATGAACCCATATCCCGGTATGCAACCGGGTATGCAGCCCCAGTG
GTCCGGATTTCAAGATATGAACAGCAAGGCTCAAGACATGCCTGGTTCAG
TTGGACATGGCCCGACCCGCGGTGGGCCTTCGGGAAGCAGAGACTCTATT
GCGAAATGGGGGACACCGTCACACCTGCCACCCAAGCCACCACCGTCCGA
GGTGCCTTCTGACTTTGACTTGAAACCGCGCAGTGGGCCCAGCTCGACGC
ATCCTTACTCAGGCAACACGCTCCCCGCCACCAAGAACGGGCCGCTTGTT
GTTTCTGGCGGAGCAAGTCTGCCACGGGTAAATTAAATGGCATCCAAGAG
TTCCACAAGAGACGAGCATCGTCTTTCCTTTGCAAAGGTAGGTGCTGCGT
TGCTGGTCGGCCAACGGCGGGCTCTTGCTGACCCGCTTGAGCAGATTGCG
GCCATGCCTCCGCCATCAAATCCGGAAGCCCCCGTATCATCTGACGAATT
GAACGGCCCACAGTCCGTCGACAACCCATCATCATGTTCCGAACAACGTG
GCTCGGAAAATGTCCCCTCCAACCAGGGAGATCCGACCCCTGTCCGAAAC
GAGGCTGCCGCTGATGATCGAAACGTCGACAGTTTATCTCAGGCCGTGCA
TGGTGTCAGCATCGATGACAGAAAGTACCACGACGGTCCTGTGTTCTCCA
CTGAGGCTGCAGACAACGGTTCTCTGAAACGAGAGAACTCGTTTGAGGAC
GATCGTACCCATCTTTCCAACTCCTCTACCAAGCCCACGAGCTTCGACTC
TAAGAGCATGGCTTCTGTGACGACATTCGCAATGGACGAAAAAGATTCTT
TGCGTCCGGATGACAGTGCGAGCGTTCAGGCTATTGATGAGGAGGAGTCT
CTATCTGGGCACGCTTCCGGTGCCCCCAATTCATTGACAGGGTCAGAGTC
AGGTGCCCGCGGATTCATACAGAGACCTCGGGGAATCCTCCAGCCGACGG
TACCTATCTTCAATGATGGTATACAGCGCACGAATGGTGCCATGCTGCCA
GACACTGTCGCCAACAATTACGCGAACGCCGATGCTTTCCAAGCAGGACG
GCCTATACATGGGTTCCCGTCAGAGCCCGACGAGAAACTCCTCGAGGCTA
TGAAGTCCCCCAAAGACCGCCTCTTGATTCTTCAACTGGAAGAAAAGGTC
CGATACTTTATACAAAATTCTAAGGAGCACTCTTTGGAACTCCCGCCTTC
GAACGCTTTTGGGCGGCTCCTTGCACACAAGCTGGGCGATTACTACCATC
TGACGCACTTCGTTGACAATAACGTCACGTCCGTCCGGCTTCACCGGACG
CCTTTTTGTCGGCTCCCCACGCCTCTCTCAGTTCTCCACGCTGCGACTAA
TAGTACTCCGCCTCCCGCCATGCCTGCCATGAAGATCATGCGCCGTACTG
ATAGTGAGCGGCCTTCCACCGAGGGTAGCATCGCGGCAAGCTCCTCCGCT
CCGTCTAAGAACGGGTCCGAAGCGGGGGACAGTGGAAATGACGGGGAAAG
GGGATCTACCCCGGCAAAGGACAGGTTGACCTTGACCCGCGAAGAGAGGG
AAGCCAAGTACCAGGAAGCTAGGGAGCGGATTTTCCGTGATTTTACCGAG
TCGAAAAGTTCCGAGAACGCCAATGGCGATTCCGGTACCAATATGTCACG
CTCGAGCTCAACAAGTGGACGCAAAAAGGCGCACCGACAGAAAACTCCTC
ACGATGACAGTTTTGAGGTTCGATCTCAGTTCAACGCGTATTATCCAGGA
ATGCCTTATGCCAACGGACCCATGCCCTACGGCATGCCTGTCAATGACCC
GTCTTTTCCAACCCAACCTTGCATGGTGGGACCCGGTGTGTCGCCCCCTA
CTATGGGCTACGGTCATGGTGGCCAGGCTAGTCCAATGTATTCTGGGCCC
GTGAACTTGAATGCTATGCCGCATTATTCGATGCCTGTGTCGCCTCAGAT
GACTCCTAGTGGCCCATGGCAGAATGGCCCTGTGCCACAACAGTCCCCCT
ACTCTGGTTATGCGACCATCAACCAGTCGCCCGCGATGGCATCCACTAAG
TCGTCTCCTGCATTGGGCAGTTATCCTATGCCAAACTCCGTCCAATATCA
ACCCAATCCTGGTTGGTCCACGCCACCTTATGCCGGCGGCTATCCACAAC
CATCACATCGCAATCCTCCCCCATCGGGATGGGCCGGCTATCAAACGCAG
CCTCCTACACCAACTTCTTATCCTTATGCTCAGTATCCCGGACAGCCCAT
GAGTCCGGGCATGCAGGGTCACGGCGGTGCTCACCCTTTGCCCGGAAGCT
TCAATAGGTCGCCTTTCAATCCACAGACCCGCTCGTTTGTCCCTGGTGGT
GCGGCGTTAGCACGGCACCCCAGCAAGGGCAACCAGCATGGTATGAACCC
ATATCCCGGTATGCAACCGGGTATGCAGCCCCAGTGGTCCGGATTTCAAG
ATATGAACAGCAAGGCTCAAGACATGCCTGGTTCAGTTGGACATGGCCCG
ACCCGCGGTGGGCCTTCGGGAAGCAGAGACTCTATTGCGAAATGGGGGAC
ACCGTCACACCTGCCACCCAAGCCACCACCGTCCGAGGTGCCTTCTGACT
TTGACTTGAAACCGCGCAGTGGGCCCAGCTCGACGCATCCTTACTCAGGC
AACACGCTCCCCGCCACCAAGAACGGGCCGCTTGTTGTTTCTGGCGGAGC
AAGTCTGCCACGGGTAAATTAAATGGCATCCAAGAGTTCCACAAGAGACG
AGCATCGTCTTTCCTTTGCAAAGGTAGGTGCTGCGTTGCTGGTCGGCCAA
CGGCGGGCTCTTGCTGACCCGCTTGAGCAGATTGCGGCCATGCCTCCGCC
ATCAAATCCGGAAGCCCCCGTATCATCTGACGAATTGAACGGCCCACAGT
CCGTCGACAACCCATCATCATGTTCCGAACAACGTGGCTCGGAAAATGTC
CCCTCCAACCAGGGAGATCCGACCCCTGTCCGAAACGAGGCTGCCGCTGA
TGATCGAAACGTCGACAGTTTATCTCAGGCCGTGCATGGTGTCAGCATCG
ATGACAGAAAGTACCACGACGGTCCTGTGTTCTCCACTGAGGCTGCAGAC
AACGGTTCTCTGAAACGAGAGAACTCGTTTGAGGACGATCGTACCCATCT
TTCCAACTCCTCTACCAAGCCCACGAGCTTCGACTCTAAGAGCATGGCTT
CTGTGACGACATTCGCAATGGACGAAAAAGATTCTTTGCGTCCGGATGAC
AGTGCGAGCGTTCAGGCTATTGATGAGGAGGAGTCTCTATCTGGGCACGC
TTCCGGTGCCCCCAATTCATTGACAGGGTCAGAGTCAGGTGCCCGCGGAT
TCATACAGAGACCTCGGGGAATCCTCCAGCCGACGGTACCTATCTTCAAT
GATGGTATACAGCGCACGAATGGTGCCATGCTGCCAGACACTGTCGCCAA
CAATTACGCGAACGCCGATGCTTTCCAAGCAGGACGGCCTATACATGGGT
TCCCGTCAGAGCCCGACGAGAAACTCCTCGAGGCTATGAAGTCCCCCAAA
GACCGCCTCTTGATTCTTCAACTGGAAGAAAAGGTCCGATACTTTATACA
AAATTCTAAGGAGCACTCTTTGGAACTCCCGCCTTCGAACGCTTTTGGGC
GGCTCCTTGCACACAAGCTGGGCGATTACTACCATCTGACGCACTTCGTT
GACAATAACGTCACGTCCGTCCGGCTTCACCGGACGCCTTTTTGTCGGCT
CCCCACGCCTCTCTCAGTTCTCCACGCTGCGACTAATAGTACTCCGCCTC
CCGCCATGCCTGCCATGAAGATCATGCGCCGTACTGATAGTGAGCGGCCT
TCCACCGAGGGTAGCATCGCGGCAAGCTCCTCCGCTCCGTCTAAGAACGG
GTCCGAAGCGGGGGACAGTGGAAATGACGGGGAAAGGGGATCTACCCCGG
CAAAGGACAGGTTGACCTTGACCCGCGAAGAGAGGGAAGCCAAGTACCAG
GAAGCTAGGGAGCGGATTTTCCGTGATTTTACCGAGTCGAAAAGTTCCGA
GAACGCCAATGGCGATTCCGGTACCAATATGTCACGCTCGAGCTCAACAA
GTGGACGCAAAAAGGCGCACCGACAGAAAACTCCTCACGATGACAGTTTT
GAGGTTCGATCTCAGTTCAACGCGTATTATCCAGGAATGCCTTATGCCAA
CGGACCCATGCCCTACGGCATGCCTGTCAATGACCCGTCTTTTCCAACCC
AACCTTGCATGGTGGGACCCGGTGTGTCGCCCCCTACTATGGGCTACGGT
CATGGTGGCCAGGCTAGTCCAATGTATTCTGGGCCCGTGAACTTGAATGC
TATGCCGCATTATTCGATGCCTGTGTCGCCTCAGATGACTCCTAGTGGCC
CATGGCAGAATGGCCCTGTGCCACAACAGTCCCCCTACTCTGGTTATGCG
ACCATCAACCAGTCGCCCGCGATGGCATCCACTAAGTCGTCTCCTGCATT
GGGCAGTTATCCTATGCCAAACTCCGTCCAATATCAACCCAATCCTGGTT
GGTCCACGCCACCTTATGCCGGCGGCTATCCACAACCATCACATCGCAAT
CCTCCCCCATCGGGATGGGCCGGCTATCAAACGCAGCCTCCTACACCAAC
TTCTTATCCTTATGCTCAGTATCCCGGACAGCCCATGAGTCCGGGCATGC
AGGGTCACGGCGGTGCTCACCCTTTGCCCGGAAGCTTCAATAGGTCGCCT
TTCAATCCACAGACCCGCTCGTTTGTCCCTGGTGGTGCGGCGTTAGCACG
GCACCCCAGCAAGGGCAACCAGCATGGTATGAACCCATATCCCGGTATGC
AACCGGGTATGCAGCCCCAGTGGTCCGGATTTCAAGATATGAACAGCAAG
GCTCAAGACATGCCTGGTTCAGTTGGACATGGCCCGACCCGCGGTGGGCC
TTCGGGAAGCAGAGACTCTATTGCGAAATGGGGGACACCGTCACACCTGC
CACCCAAGCCACCACCGTCCGAGGTGCCTTCTGACTTTGACTTGAAACCG
CGCAGTGGGCCCAGCTCGACGCATCCTTACTCAGGCAACACGCTCCCCGC
CACCAAGAACGGGCCGCTTGTTGTTTCTGGCGGAGCAAGTCTGCCACGGG
TAAATTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036867 |
| DBxref | InterPro:IPR024771 |
| DBxref | InterPro:IPR001374 |
| DBxref | PFAM:PF12752 |
| DBxref | PFAM:PF01424 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:184101..186655 + |
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