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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:187333..188013- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005009-T1 ID=CBS51388_005009-T1|Name=CBS51388_005009-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=681bp|location=Sequence derived from alignment at An08:187333..188013- (Aspergillus niger CBS 513.88)
ATGGCCGGAGGTGCTACCAAGTTCCGCCATTTGAGCCGCAAGTCCTCCCA
CAGACAGGCTCTGCTCCGCAACCTCGTCACCTCCCTCTTCCAGCATGAAT
CCATCACAACCACATGGGCCAAGGCCAAGGAGGCGCAACGACTGGCCGAG
AAGTTGATCACCCTGGGCAAGAAGAACACCGAAGCCAGTCGGAAACGCGC
ATTGTCGACGTTTTATGTATGACGCAGTCCTTATCTTCTCTTTCTCAAAC
ACATACATACATACCGTGGAGAACATACGATAGAGGAAAGCGAACATTCT
CAACTAACCAAGGAATAATAGACCCCCCACGAGCTCCTCCCCAAACTCTT
CGGTCCTCTTCGTGAACGCTACGCCGAACGCCCCGGTGGCTACACGCGAG
TTCTGCGCGTCGAACCCAAGAAGGACGATCAAGCCGCCAGCGCAATCCTG
GAGTTGGTAGATGGACCTAAAGATATGCGGTTTGCTTTGACGGCGCGGAC
AGTTGCTAGGCAGCGGTCTCAGGGCCTGGAGACCCTCAATGAACTCACTA
CGATGAATGTCAATAAGGTCACACGGTTCCGGAAAGGAGGGATTGCTGAT
CTGGAGAGGGAGATCAAGCGGTTAGAGATCACGGGTCACGGGAAGGAGGA
CGCGGGGAAGGCGAAGCCTGCGAAGCAATAA back to topCoding sequence (CDS) from alignment at An08:187333..188013- >CBS51388_005009-T1 ID=CBS51388_005009-T1|Name=CBS51388_005009-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1152bp|location=Sequence derived from alignment at An08:187333..188013- (Aspergillus niger CBS 513.88)
ACCCCCCACGAGCTCCTCCCCAAACTCTTCGGTCCTCTTCGTGAACGCTA
CGCCGAACGCCCCGGTGGCTACACGCGAGTTCTGCGCGTCGAACCCAAGA
AGGACGATCAAGCCGCCAGCGCAATCCTGGAGTTGGTAGATGGACCTAAA
GATATGCGGTTTGCTTTGACGGCGCGGACAGTTGCTAGGCAGCGGTCTCA
GGGCCTGGAGACCCTCAATGAACTCACTACGATGAATGTCAATAAGGTCA
CACGGTTCCGGAAAGGAGGGATTGCTGATCTGGAGAGGGAGATCAAGCGG
TTAGAGATCACGGGTCACGGGAAGGAGGACGCGGGGAAGGCGAAGCCTGC
GAAGCAATAAATGGCCGGAGGTGCTACCAAGTTCCGCCATTTGAGCCGCA
AGTCCTCCCACAGACAGGCTCTGCTCCGCAACCTCGTCACCTCCCTCTTC
CAGCATGAATCCATCACAACCACATGGGCCAAGGCCAAGGAGGCGCAACG
ACTGGCCGAGAAGTTGATCACCCTGGGCAAGAAGAACACCGAAGCCAGTC
GGAAACGCGCATTGTCGACGTTTTATACCCCCCACGAGCTCCTCCCCAAA
CTCTTCGGTCCTCTTCGTGAACGCTACGCCGAACGCCCCGGTGGCTACAC
GCGAGTTCTGCGCGTCGAACCCAAGAAGGACGATCAAGCCGCCAGCGCAA
TCCTGGAGTTGGTAGATGGACCTAAAGATATGCGGTTTGCTTTGACGGCG
CGGACAGTTGCTAGGCAGCGGTCTCAGGGCCTGGAGACCCTCAATGAACT
CACTACGATGAATGTCAATAAGGTCACACGGTTCCGGAAAGGAGGGATTG
CTGATCTGGAGAGGGAGATCAAGCGGTTAGAGATCACGGGTCACGGGAAG
GAGGACGCGGGGAAGGCGAAGCCTGCGAAGCAATAAATGGCCGGAGGTGC
TACCAAGTTCCGCCATTTGAGCCGCAAGTCCTCCCACAGACAGGCTCTGC
TCCGCAACCTCGTCACCTCCCTCTTCCAGCATGAATCCATCACAACCACA
TGGGCCAAGGCCAAGGAGGCGCAACGACTGGCCGAGAAGTTGATCACCCT
GGGCAAGAAGAACACCGAAGCCAGTCGGAAACGCGCATTGTCGACGTTTT
AT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264MZ1 |
| DBxref | InterPro:IPR036373 |
| DBxref | InterPro:IPR000456 |
| DBxref | PFAM:PF01196 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:187333..188013 - |
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