You are here

Home

CBS51388_005010-T1, CBS51388_005010-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005010-T1
Unique NameCBS51388_005010-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:188630..189130+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005010-T1 ID=CBS51388_005010-T1|Name=CBS51388_005010-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=501bp|location=Sequence derived from alignment at An08:188630..189130+ (Aspergillus niger CBS 513.88)
ATGGGCTTCTTCACTGGCTTCGTAAGTCTCCATTCTACCTTTCCTCTCTT
TAACACCCATCCATCCATCTATCCATTCTACATCCATCCCTTCAACTCCA
TCCACCTCCTCGTATACAAACCGAACCACCAGAACTTACACCCATATCAG
TTCAGCGGCTTTGCCCTCACCACCTCCGTCCTGTACATCTCACTCCAAGT
ACACAAAGCCAATCGCCTGGAACAGCGCAATGCCATTCGCGAACAAACCC
GTGCGCTGAACTGGCTGGCCTCATCGGCAGGCGCATACGACCGTCGCTTA
CTGCCTCAGGAGACCCAGAAGCGTCCGGGTGAGCAAGAAGACCGGGCAAC
GAAACCCGCCTTGAAGGACTTTTTGAAACATCGCTGGAACCAGGAGGTCG
AGACGTTGGCGAGGAAGGCGTATGAGAGTCGGTGGGAGGATGCGCGGGAT
ACGGCTGTGGAGGGGTGGAAGACGGTGATGAGGTTGGTGAAGAAGGAGTA
G
back to top

Coding sequence (CDS) from alignment at An08:188630..189130+

>CBS51388_005010-T1 ID=CBS51388_005010-T1|Name=CBS51388_005010-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=744bp|location=Sequence derived from alignment at An08:188630..189130+ (Aspergillus niger CBS 513.88)
ATGGGCTTCTTCACTGGCTTCTTCAGCGGCTTTGCCCTCACCACCTCCGT
CCTGTACATCTCACTCCAAGTACACAAAGCCAATCGCCTGGAACAGCGCA
ATGCCATTCGCGAACAAACCCGTGCGCTGAACTGGCTGGCCTCATCGGCA
GGCGCATACGACCGTCGCTTACTGCCTCAGGAGACCCAGAAGCGTCCGGG
TGAGCAAGAAGACCGGGCAACGAAACCCGCCTTGAAGGACTTTTTGAAAC
ATCGCTGGAACCAGGAGGTCGAGACGTTGGCGAGGAAGGCGTATGAGAGT
CGGTGGGAGGATGCGCGGGATACGGCTGTGGAGGGGTGGAAGACGGTGAT
GAGGTTGGTGAAGAAGGAGTAGATGGGCTTCTTCACTGGCTTCTTCAGCG
GCTTTGCCCTCACCACCTCCGTCCTGTACATCTCACTCCAAGTACACAAA
GCCAATCGCCTGGAACAGCGCAATGCCATTCGCGAACAAACCCGTGCGCT
GAACTGGCTGGCCTCATCGGCAGGCGCATACGACCGTCGCTTACTGCCTC
AGGAGACCCAGAAGCGTCCGGGTGAGCAAGAAGACCGGGCAACGAAACCC
GCCTTGAAGGACTTTTTGAAACATCGCTGGAACCAGGAGGTCGAGACGTT
GGCGAGGAAGGCGTATGAGAGTCGGTGGGAGGATGCGCGGGATACGGCTG
TGGAGGGGTGGAAGACGGTGATGAGGTTGGTGAAGAAGGAGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0044284mitochondrial crista junction
GO:0061617MICOS complex
Vocabulary: Biological Process
TermDefinition
GO:0042407cristae formation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005010CBS51388_005010Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005010-T1.exon1CBS51388_005010-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_005010-T1.exon2CBS51388_005010-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005010-T1.cdsCBS51388_005010-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005010-T1CBS51388_005010-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-27)
DBxrefInterPro:IPR031463
DBxrefPFAM:PF17050
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:188630..189130 +
Powered by Drupal