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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:203168..203998+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005018-T1 ID=CBS51388_005018-T1|Name=CBS51388_005018-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=831bp|location=Sequence derived from alignment at An08:203168..203998+ (Aspergillus niger CBS 513.88)
ATGGCTACGGAAGAGAACGAGATCAAGGATGAGCGCCTGCAACACCAGGA
GGAGGCCGGTGATGATGAGGTACGTTTTGACTGCTTGCGCTGAAAACCCA
AAGCTTGATGCTTTCTTTTGCTTGTTTCTTGGCTTGCTTCTATTTGACTT
GGCGATTTGTCTTTCACTGAATCTAGCTAACGTGACCTTCTTTTTTCATG
ACTTATAGGAGGAGATTGCGGCGATGAAGAAACGGGTAGCCGAAATGGAA
TCCGAGGCAGCGAAGCTACGCGAGATGCAAGCCACGCTTGATCAGCAATC
GGAGAACCTGCGTGAGGACAAAGAGGAGATCGACGCTCGGAGTGTCTTCG
TCGGCAACGTGGACTACGGTGCCTCTCCCGAGGAGATTCAGGCACACTTT
CAAAGTTGCGGCTCAATAAACCGTGTCACTATCCTGCTGGACAAGTTCAC
CGGCCAGCCCAAGGGGTATGTTGCAGCGCATTCATTTGACAGGCTGGGGG
GCATCATATGCTGATATGATTTACAGATACGCCTATGTAGAATTTGCGGA
ACCCAGTTTAGTGGCTCAGGCCCTTGTCTTGAACGAGAGTGTCTTCCGCG
GCCGGAACCTGAAGGTAGATCGCATGATAGAGGCCATTGATCGACTGAAT
GATACTAATGCTCGATGCTTTACAGGTCGTTCCAAAGCGTACCAACCTGC
CGGGCATGAGCCGCGGTCGTGGACGAGGTGGATTCCGCGGTGGTGGCCGG
GGGTACCGTGGTGGATTTGCGCCCCGTGGAGGGTATCGCGGTGGCTACCG
TGGCCGGGGTCGCGGCTATGCGCCCTACTAA back to topCoding sequence (CDS) from alignment at An08:203168..203998+ >CBS51388_005018-T1 ID=CBS51388_005018-T1|Name=CBS51388_005018-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2280bp|location=Sequence derived from alignment at An08:203168..203998+ (Aspergillus niger CBS 513.88)
ATGGCTACGGAAGAGAACGAGATCAAGGATGAGCGCCTGCAACACCAGGA
GGAGGCCGGTGATGATGAGGAGGAGATTGCGGCGATGAAGAAACGGGTAG
CCGAAATGGAATCCGAGGCAGCGAAGCTACGCGAGATGCAAGCCACGCTT
GATCAGCAATCGGAGAACCTGCGTGAGGACAAAGAGGAGATCGACGCTCG
GAGTGTCTTCGTCGGCAACGTGGACTACGGTGCCTCTCCCGAGGAGATTC
AGGCACACTTTCAAAGTTGCGGCTCAATAAACCGTGTCACTATCCTGCTG
GACAAGTTCACCGGCCAGCCCAAGGGATACGCCTATGTAGAATTTGCGGA
ACCCAGTTTAGTGGCTCAGGCCCTTGTCTTGAACGAGAGTGTCTTCCGCG
GCCGGAACCTGAAGGTCGTTCCAAAGCGTACCAACCTGCCGGGCATGAGC
CGCGGTCGTGGACGAGGTGGATTCCGCGGTGGTGGCCGGGGGTACCGTGG
TGGATTTGCGCCCCGTGGAGGGTATCGCGGTGGCTACCGTGGCCGGGGTC
GCGGCTATGCGCCCTACTAAATGGCTACGGAAGAGAACGAGATCAAGGAT
GAGCGCCTGCAACACCAGGAGGAGGCCGGTGATGATGAGGAGGAGATTGC
GGCGATGAAGAAACGGGTAGCCGAAATGGAATCCGAGGCAGCGAAGCTAC
GCGAGATGCAAGCCACGCTTGATCAGCAATCGGAGAACCTGCGTGAGGAC
AAAGAGGAGATCGACGCTCGGAGTGTCTTCGTCGGCAACGTGGACTACGG
TGCCTCTCCCGAGGAGATTCAGGCACACTTTCAAAGTTGCGGCTCAATAA
ACCGTGTCACTATCCTGCTGGACAAGTTCACCGGCCAGCCCAAGGGATAC
GCCTATGTAGAATTTGCGGAACCCAGTTTAGTGGCTCAGGCCCTTGTCTT
GAACGAGAGTGTCTTCCGCGGCCGGAACCTGAAGGTCGTTCCAAAGCGTA
CCAACCTGCCGGGCATGAGCCGCGGTCGTGGACGAGGTGGATTCCGCGGT
GGTGGCCGGGGGTACCGTGGTGGATTTGCGCCCCGTGGAGGGTATCGCGG
TGGCTACCGTGGCCGGGGTCGCGGCTATGCGCCCTACTAAATGGCTACGG
AAGAGAACGAGATCAAGGATGAGCGCCTGCAACACCAGGAGGAGGCCGGT
GATGATGAGGAGGAGATTGCGGCGATGAAGAAACGGGTAGCCGAAATGGA
ATCCGAGGCAGCGAAGCTACGCGAGATGCAAGCCACGCTTGATCAGCAAT
CGGAGAACCTGCGTGAGGACAAAGAGGAGATCGACGCTCGGAGTGTCTTC
GTCGGCAACGTGGACTACGGTGCCTCTCCCGAGGAGATTCAGGCACACTT
TCAAAGTTGCGGCTCAATAAACCGTGTCACTATCCTGCTGGACAAGTTCA
CCGGCCAGCCCAAGGGATACGCCTATGTAGAATTTGCGGAACCCAGTTTA
GTGGCTCAGGCCCTTGTCTTGAACGAGAGTGTCTTCCGCGGCCGGAACCT
GAAGGTCGTTCCAAAGCGTACCAACCTGCCGGGCATGAGCCGCGGTCGTG
GACGAGGTGGATTCCGCGGTGGTGGCCGGGGGTACCGTGGTGGATTTGCG
CCCCGTGGAGGGTATCGCGGTGGCTACCGTGGCCGGGGTCGCGGCTATGC
GCCCTACTAAATGGCTACGGAAGAGAACGAGATCAAGGATGAGCGCCTGC
AACACCAGGAGGAGGCCGGTGATGATGAGGAGGAGATTGCGGCGATGAAG
AAACGGGTAGCCGAAATGGAATCCGAGGCAGCGAAGCTACGCGAGATGCA
AGCCACGCTTGATCAGCAATCGGAGAACCTGCGTGAGGACAAAGAGGAGA
TCGACGCTCGGAGTGTCTTCGTCGGCAACGTGGACTACGGTGCCTCTCCC
GAGGAGATTCAGGCACACTTTCAAAGTTGCGGCTCAATAAACCGTGTCAC
TATCCTGCTGGACAAGTTCACCGGCCAGCCCAAGGGATACGCCTATGTAG
AATTTGCGGAACCCAGTTTAGTGGCTCAGGCCCTTGTCTTGAACGAGAGT
GTCTTCCGCGGCCGGAACCTGAAGGTCGTTCCAAAGCGTACCAACCTGCC
GGGCATGAGCCGCGGTCGTGGACGAGGTGGATTCCGCGGTGGTGGCCGGG
GGTACCGTGGTGGATTTGCGCCCCGTGGAGGGTATCGCGGTGGCTACCGT
GGCCGGGGTCGCGGCTATGCGCCCTACTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF00076 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:203168..203998 + |
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