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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:226563..227291+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005025-T1 ID=CBS51388_005025-T1|Name=CBS51388_005025-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=729bp|location=Sequence derived from alignment at An08:226563..227291+ (Aspergillus niger CBS 513.88)
ATGACCAAACCACTACTCCTCCATGCCCACGCTACGGGCCCTAACCCCAT
CAAGATCGCCATCGCTCTCGAAGCCCTCCAAGTCCCCTACGAAGTCCAAC
AGTGGGAGTTTGGCGACGACCCCCAAAAAGGCGTCAAAGGCGAGGCTTAC
TTAAAGATCAACGAGAATGGTCGGCTTCCCTCTCTCCAGGACCCGAACAC
GGGCGTCGTGGCCTGGGAATCTGGCGCATGCATGAATTACGTCCGCCGAG
TGTATGACCGCGACGGACAGTTAGGTCCAGTTGGTAAGACAGAGCAGGAT
ATCGTCGACTTGGAGAAATGGGAGTATTTCCTGCTCACCAATCTGGCGCC
TATGCTGGGCCAGGTTAACTGGTTTAGGTATTTCTGCCCTCCTTGTCGCC
TAGTTGGTTGACGAGCGAATCGTGCTAACGTAACACTAAGGAACTACCAT
GCGGTGAAGAACCAGGATGCGCTGAATAGATATACGGAGCAGGCTTATCG
CTGCTTCGGGGTGTTGGAAGGGCAGTTGAAGAAATCGAATGGAGAGAGTG
TTCTGCCTGGAAAAATTACCGCTGTGGATTATCATTCGGAGCCTTGGGTG
AGGCAGTATTCTTTTGCGGGGCTGTCTTTGGATTCCTACCCCCTCATTCA
GCGTTGGCTGGCTGGGATGGCTGGCCGGGAGGAGGTGAAGAGAGCTTATG
TGGAGATCAAGGGGAAGGGCCCAGAGTAA back to topCoding sequence (CDS) from alignment at An08:226563..227291+ >CBS51388_005025-T1 ID=CBS51388_005025-T1|Name=CBS51388_005025-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1332bp|location=Sequence derived from alignment at An08:226563..227291+ (Aspergillus niger CBS 513.88)
ATGACCAAACCACTACTCCTCCATGCCCACGCTACGGGCCCTAACCCCAT
CAAGATCGCCATCGCTCTCGAAGCCCTCCAAGTCCCCTACGAAGTCCAAC
AGTGGGAGTTTGGCGACGACCCCCAAAAAGGCGTCAAAGGCGAGGCTTAC
TTAAAGATCAACGAGAATGGTCGGCTTCCCTCTCTCCAGGACCCGAACAC
GGGCGTCGTGGCCTGGGAATCTGGCGCATGCATGAATTACGTCCGCCGAG
TGTATGACCGCGACGGACAGTTAGGTCCAGTTGGTAAGACAGAGCAGGAT
ATCGTCGACTTGGAGAAATGGGAGTATTTCCTGCTCACCAATCTGGCGCC
TATGCTGGGCCAGGTTAACTGGTTTAGGAACTACCATGCGGTGAAGAACC
AGGATGCGCTGAATAGATATACGGAGCAGGCTTATCGCTGCTTCGGGGTG
TTGGAAGGGCAGTTGAAGAAATCGAATGGAGAGAGTGTTCTGCCTGGAAA
AATTACCGCTGTGGATTATCATTCGGAGCCTTGGGTGAGGCAGTATTCTT
TTGCGGGGCTGTCTTTGGATTCCTACCCCCTCATTCAGCGTTGGCTGGCT
GGGATGGCTGGCCGGGAGGAGGTGAAGAGAGCTTATGTGGAGATCAAGGG
GAAGGGCCCAGAGTAAATGACCAAACCACTACTCCTCCATGCCCACGCTA
CGGGCCCTAACCCCATCAAGATCGCCATCGCTCTCGAAGCCCTCCAAGTC
CCCTACGAAGTCCAACAGTGGGAGTTTGGCGACGACCCCCAAAAAGGCGT
CAAAGGCGAGGCTTACTTAAAGATCAACGAGAATGGTCGGCTTCCCTCTC
TCCAGGACCCGAACACGGGCGTCGTGGCCTGGGAATCTGGCGCATGCATG
AATTACGTCCGCCGAGTGTATGACCGCGACGGACAGTTAGGTCCAGTTGG
TAAGACAGAGCAGGATATCGTCGACTTGGAGAAATGGGAGTATTTCCTGC
TCACCAATCTGGCGCCTATGCTGGGCCAGGTTAACTGGTTTAGGAACTAC
CATGCGGTGAAGAACCAGGATGCGCTGAATAGATATACGGAGCAGGCTTA
TCGCTGCTTCGGGGTGTTGGAAGGGCAGTTGAAGAAATCGAATGGAGAGA
GTGTTCTGCCTGGAAAAATTACCGCTGTGGATTATCATTCGGAGCCTTGG
GTGAGGCAGTATTCTTTTGCGGGGCTGTCTTTGGATTCCTACCCCCTCAT
TCAGCGTTGGCTGGCTGGGATGGCTGGCCGGGAGGAGGTGAAGAGAGCTT
ATGTGGAGATCAAGGGGAAGGGCCCAGAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036282 |
| DBxref | InterPro:IPR010987 |
| DBxref | InterPro:IPR040079 |
| DBxref | InterPro:IPR004046 |
| DBxref | InterPro:IPR036249 |
| DBxref | InterPro:IPR004045 |
| DBxref | PFAM:PF13417 |
| DBxref | PFAM:PF13409 |
| DBxref | PFAM:PF02798 |
| DBxref | PFAM:PF00043 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:226563..227291 + |
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