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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:231638..233029- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005028-T1 ID=CBS51388_005028-T1|Name=CBS51388_005028-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1392bp|location=Sequence derived from alignment at An08:231638..233029- (Aspergillus niger CBS 513.88)
ATGAGCGTTATACTTTGCACTGGTATGCAATTCCCTCGGCGCTAGCTGGT
CTCTAACATCTTCTGTCTGTCCCAGTGGGAATTGACTGACCAATGTTCTA
TAACTCGTGATGTCCAGCGGGCTACGACCACACCATTCGGTATGTCAGAC
TGTGTTACTTGCGCCCCGAAAAGTAGACGTCGCTAACTTGGCCCAGGTTT
TGGGAGGCCTTGTCGGGAATTTGCTCGCGCACTATACAGCATCCCGATTC
CCAAGTTAATCGATTATGCATCACCCCCGACAAACGGTACTTGGCAGCCG
CCGGTCACAACAATGTCAAGCTGTATGACATCAAATCTACCAATCCCAAT
CCAGTCATGACCTTCGACGGCCATACAAACAACATCACTGGCGTCGCGTT
TCACTGCGAGGGGAAGTGGATGGTTACCAGCTCGGAGGATGGTACGGTTA
AAGTCTGGGATACCCGTACAGGCAGCCTGCAGCGCAATTACGCGCATAAA
GCTCCAGTCAACGATGTTGTAATCCACCCCAACCAAGGCGAACTTATTAG
TGGGGATCGCGCTGGTATCGTCCGGGTTTGGGACCTGGGTGAAAGCGTCT
GCACCCACCAGCTAATTCCCGAGGACGACGTTGCGGTTCACAGTGTTAGT
GTCGCAAGCGATGGGTCTTTGCTTTGCGCTGGAAACAAGAAGGTAGAAAG
GATGATTATTCTTTACTCGTCTTCAGCGCTGACTTTGAGCGACCGATTTA
TAGGGTAATGTCTACATCTGGCGCATGATTCAAGACGCCGAAATAACGCG
CATCGTTCCGATATGTACCTTCCAGGCGCACAAGGACTACCTCACCCGCG
TTCTTCTCTCCCCAGATGTCAAGCATCTCGCGACGTGCTCTGCCGACCAC
ACGGCCAAAGTATGGAACCTTGATCTTGATTACCCGCCGGCCAAGATTGC
CGCCGCCAACGCCGCCAAAGCTAAGGCCAGAGCCATTTCTTCGCCCGAAT
CGAATGACACCCCTTCTTCCCCAGAATCGACGCAACACGTGAACAACGCA
TCTCCCAACGGCACCGACTTTGAAGCCAACCCATTCAGTCTCTTCCAAGC
AGCGACACCTCCTGTCAATAACGAACCGCAGCAGACCTTCCCTGTACAAC
CGGACGGACCCCCCATGGACTCCGCAACAGGGACACTCTTCCTAGAGACC
ACGCTTGCCAATCACCAACGGTGGGTCTGGGATTGCGCTTTCTCCGCCGA
CTCTGCGTATCTCGTCACAGTATCCAGCGACCACTACGCCCGCTTATGGG
AGCTGGCTTCGGGCCAGATCATCCGTCAATACAGTGGCCATCACCGCGGG
GCGGTATGCGTAGCGCTGAACGATTATTCCGAGCCGCGTTGA back to topCoding sequence (CDS) from alignment at An08:231638..233029- >CBS51388_005028-T1 ID=CBS51388_005028-T1|Name=CBS51388_005028-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4716bp|location=Sequence derived from alignment at An08:231638..233029- (Aspergillus niger CBS 513.88)
GGTAATGTCTACATCTGGCGCATGATTCAAGACGCCGAAATAACGCGCAT
CGTTCCGATATGTACCTTCCAGGCGCACAAGGACTACCTCACCCGCGTTC
TTCTCTCCCCAGATGTCAAGCATCTCGCGACGTGCTCTGCCGACCACACG
GCCAAAGTATGGAACCTTGATCTTGATTACCCGCCGGCCAAGATTGCCGC
CGCCAACGCCGCCAAAGCTAAGGCCAGAGCCATTTCTTCGCCCGAATCGA
ATGACACCCCTTCTTCCCCAGAATCGACGCAACACGTGAACAACGCATCT
CCCAACGGCACCGACTTTGAAGCCAACCCATTCAGTCTCTTCCAAGCAGC
GACACCTCCTGTCAATAACGAACCGCAGCAGACCTTCCCTGTACAACCGG
ACGGACCCCCCATGGACTCCGCAACAGGGACACTCTTCCTAGAGACCACG
CTTGCCAATCACCAACGGTGGGTCTGGGATTGCGCTTTCTCCGCCGACTC
TGCGTATCTCGTCACAGTATCCAGCGACCACTACGCCCGCTTATGGGAGC
TGGCTTCGGGCCAGATCATCCGTCAATACAGTGGCCATCACCGCGGGGCG
GTATGCGTAGCGCTGAACGATTATTCCGAGCCGCGTTGAGTTTTGGGAGG
CCTTGTCGGGAATTTGCTCGCGCACTATACAGCATCCCGATTCCCAAGTT
AATCGATTATGCATCACCCCCGACAAACGGTACTTGGCAGCCGCCGGTCA
CAACAATGTCAAGCTGTATGACATCAAATCTACCAATCCCAATCCAGTCA
TGACCTTCGACGGCCATACAAACAACATCACTGGCGTCGCGTTTCACTGC
GAGGGGAAGTGGATGGTTACCAGCTCGGAGGATGGTACGGTTAAAGTCTG
GGATACCCGTACAGGCAGCCTGCAGCGCAATTACGCGCATAAAGCTCCAG
TCAACGATGTTGTAATCCACCCCAACCAAGGCGAACTTATTAGTGGGGAT
CGCGCTGGTATCGTCCGGGTTTGGGACCTGGGTGAAAGCGTCTGCACCCA
CCAGCTAATTCCCGAGGACGACGTTGCGGTTCACAGTGTTAGTGTCGCAA
GCGATGGGTCTTTGCTTTGCGCTGGAAACAAGAAGCGGGCTACGACCACA
CCATTCGATGAGCGTTATACTTTGCACTGGGTAATGTCTACATCTGGCGC
ATGATTCAAGACGCCGAAATAACGCGCATCGTTCCGATATGTACCTTCCA
GGCGCACAAGGACTACCTCACCCGCGTTCTTCTCTCCCCAGATGTCAAGC
ATCTCGCGACGTGCTCTGCCGACCACACGGCCAAAGTATGGAACCTTGAT
CTTGATTACCCGCCGGCCAAGATTGCCGCCGCCAACGCCGCCAAAGCTAA
GGCCAGAGCCATTTCTTCGCCCGAATCGAATGACACCCCTTCTTCCCCAG
AATCGACGCAACACGTGAACAACGCATCTCCCAACGGCACCGACTTTGAA
GCCAACCCATTCAGTCTCTTCCAAGCAGCGACACCTCCTGTCAATAACGA
ACCGCAGCAGACCTTCCCTGTACAACCGGACGGACCCCCCATGGACTCCG
CAACAGGGACACTCTTCCTAGAGACCACGCTTGCCAATCACCAACGGTGG
GTCTGGGATTGCGCTTTCTCCGCCGACTCTGCGTATCTCGTCACAGTATC
CAGCGACCACTACGCCCGCTTATGGGAGCTGGCTTCGGGCCAGATCATCC
GTCAATACAGTGGCCATCACCGCGGGGCGGTATGCGTAGCGCTGAACGAT
TATTCCGAGCCGCGTTGAGTTTTGGGAGGCCTTGTCGGGAATTTGCTCGC
GCACTATACAGCATCCCGATTCCCAAGTTAATCGATTATGCATCACCCCC
GACAAACGGTACTTGGCAGCCGCCGGTCACAACAATGTCAAGCTGTATGA
CATCAAATCTACCAATCCCAATCCAGTCATGACCTTCGACGGCCATACAA
ACAACATCACTGGCGTCGCGTTTCACTGCGAGGGGAAGTGGATGGTTACC
AGCTCGGAGGATGGTACGGTTAAAGTCTGGGATACCCGTACAGGCAGCCT
GCAGCGCAATTACGCGCATAAAGCTCCAGTCAACGATGTTGTAATCCACC
CCAACCAAGGCGAACTTATTAGTGGGGATCGCGCTGGTATCGTCCGGGTT
TGGGACCTGGGTGAAAGCGTCTGCACCCACCAGCTAATTCCCGAGGACGA
CGTTGCGGTTCACAGTGTTAGTGTCGCAAGCGATGGGTCTTTGCTTTGCG
CTGGAAACAAGAAGCGGGCTACGACCACACCATTCGATGAGCGTTATACT
TTGCACTGGGTAATGTCTACATCTGGCGCATGATTCAAGACGCCGAAATA
ACGCGCATCGTTCCGATATGTACCTTCCAGGCGCACAAGGACTACCTCAC
CCGCGTTCTTCTCTCCCCAGATGTCAAGCATCTCGCGACGTGCTCTGCCG
ACCACACGGCCAAAGTATGGAACCTTGATCTTGATTACCCGCCGGCCAAG
ATTGCCGCCGCCAACGCCGCCAAAGCTAAGGCCAGAGCCATTTCTTCGCC
CGAATCGAATGACACCCCTTCTTCCCCAGAATCGACGCAACACGTGAACA
ACGCATCTCCCAACGGCACCGACTTTGAAGCCAACCCATTCAGTCTCTTC
CAAGCAGCGACACCTCCTGTCAATAACGAACCGCAGCAGACCTTCCCTGT
ACAACCGGACGGACCCCCCATGGACTCCGCAACAGGGACACTCTTCCTAG
AGACCACGCTTGCCAATCACCAACGGTGGGTCTGGGATTGCGCTTTCTCC
GCCGACTCTGCGTATCTCGTCACAGTATCCAGCGACCACTACGCCCGCTT
ATGGGAGCTGGCTTCGGGCCAGATCATCCGTCAATACAGTGGCCATCACC
GCGGGGCGGTATGCGTAGCGCTGAACGATTATTCCGAGCCGCGTTGAGTT
TTGGGAGGCCTTGTCGGGAATTTGCTCGCGCACTATACAGCATCCCGATT
CCCAAGTTAATCGATTATGCATCACCCCCGACAAACGGTACTTGGCAGCC
GCCGGTCACAACAATGTCAAGCTGTATGACATCAAATCTACCAATCCCAA
TCCAGTCATGACCTTCGACGGCCATACAAACAACATCACTGGCGTCGCGT
TTCACTGCGAGGGGAAGTGGATGGTTACCAGCTCGGAGGATGGTACGGTT
AAAGTCTGGGATACCCGTACAGGCAGCCTGCAGCGCAATTACGCGCATAA
AGCTCCAGTCAACGATGTTGTAATCCACCCCAACCAAGGCGAACTTATTA
GTGGGGATCGCGCTGGTATCGTCCGGGTTTGGGACCTGGGTGAAAGCGTC
TGCACCCACCAGCTAATTCCCGAGGACGACGTTGCGGTTCACAGTGTTAG
TGTCGCAAGCGATGGGTCTTTGCTTTGCGCTGGAAACAAGAAGCGGGCTA
CGACCACACCATTCGATGAGCGTTATACTTTGCACTGGGTAATGTCTACA
TCTGGCGCATGATTCAAGACGCCGAAATAACGCGCATCGTTCCGATATGT
ACCTTCCAGGCGCACAAGGACTACCTCACCCGCGTTCTTCTCTCCCCAGA
TGTCAAGCATCTCGCGACGTGCTCTGCCGACCACACGGCCAAAGTATGGA
ACCTTGATCTTGATTACCCGCCGGCCAAGATTGCCGCCGCCAACGCCGCC
AAAGCTAAGGCCAGAGCCATTTCTTCGCCCGAATCGAATGACACCCCTTC
TTCCCCAGAATCGACGCAACACGTGAACAACGCATCTCCCAACGGCACCG
ACTTTGAAGCCAACCCATTCAGTCTCTTCCAAGCAGCGACACCTCCTGTC
AATAACGAACCGCAGCAGACCTTCCCTGTACAACCGGACGGACCCCCCAT
GGACTCCGCAACAGGGACACTCTTCCTAGAGACCACGCTTGCCAATCACC
AACGGTGGGTCTGGGATTGCGCTTTCTCCGCCGACTCTGCGTATCTCGTC
ACAGTATCCAGCGACCACTACGCCCGCTTATGGGAGCTGGCTTCGGGCCA
GATCATCCGTCAATACAGTGGCCATCACCGCGGGGCGGTATGCGTAGCGC
TGAACGATTATTCCGAGCCGCGTTGAGTTTTGGGAGGCCTTGTCGGGAAT
TTGCTCGCGCACTATACAGCATCCCGATTCCCAAGTTAATCGATTATGCA
TCACCCCCGACAAACGGTACTTGGCAGCCGCCGGTCACAACAATGTCAAG
CTGTATGACATCAAATCTACCAATCCCAATCCAGTCATGACCTTCGACGG
CCATACAAACAACATCACTGGCGTCGCGTTTCACTGCGAGGGGAAGTGGA
TGGTTACCAGCTCGGAGGATGGTACGGTTAAAGTCTGGGATACCCGTACA
GGCAGCCTGCAGCGCAATTACGCGCATAAAGCTCCAGTCAACGATGTTGT
AATCCACCCCAACCAAGGCGAACTTATTAGTGGGGATCGCGCTGGTATCG
TCCGGGTTTGGGACCTGGGTGAAAGCGTCTGCACCCACCAGCTAATTCCC
GAGGACGACGTTGCGGTTCACAGTGTTAGTGTCGCAAGCGATGGGTCTTT
GCTTTGCGCTGGAAACAAGAAGCGGGCTACGACCACACCATTCGATGAGC
GTTATACTTTGCACTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092638XA |
| DBxref | InterPro:IPR011047 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | InterPro:IPR020472 |
| DBxref | PFAM:PF00400 |
| Product | RNase P and RNase MRP subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:231638..233029 - |
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