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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:380787..381832+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005080-T1 ID=CBS51388_005080-T1|Name=CBS51388_005080-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1046bp|location=Sequence derived from alignment at An08:380787..381832+ (Aspergillus niger CBS 513.88)
ATGCTTTTCCCTGAGGTACGCAGTGCCTCACCGTTCGCCTGCTTTCATGC
TGATAAGTACTAGTCACCACGGTGGCTCATTGATCACGGCCAGCACGAGA
AAGGCTTGAAGACATTGGCAATGCTTCATGCCCACGGCAACGAAGAGGAT
CCTTGGGTTCGTGCGGAATTTAACCAGATTCAAGAAAGCATTGTTTACGA
GCATGAGAACGAAGCCAAGTCCTACAAGGAACTCTTTACCTCACGATCGT
CCTTCCGTCGCCTGTTTCTTTGTTGCTCATTACAGGCATCTGTACAGATG
ACCGGCGTGTCTGCAATCCAGTGAGTACTCCCTTGCATATAAAGGTAAAT
CCAGAGGCTCACAACTCATCTGATAGATACTACTCTGTAACCATCTATGG
TCAGATTGGCATTAGTGGCGACAAAACGCTACAGTATCAAGCTATCAACT
CCATCATCGCCCTTGTAGCTCAATTCCTATGCATTCTCTTCATTGACCGA
GTCGGTCGCCGCTGGAGTTTGATCTGGGGTAACCTAGGAAACATGGTAAC
GTTTATTGTTGCCTGCATTCTGTTAGCACAGTTCCCCCCAGAAAGCCACA
ACACCGGAGCCCACTGGGGCTTTATCATCATGACTTGGCTATACAACTTC
TCCTTCTCGTGCACATGTGGCCCTCTCTCCTGGATCATCCCAGCAGAGGT
ATTCGACACCCGAACGCGGTCGAAGGGCGTTTCGTTGGCTACTATGACAT
CGTATGCATTCAACACGATGATTGGGCAGGTGACGCCCATTGCCATGGAG
AGTGTGCGCTATCGGTACTATTTCCTCTTTATCATCTGCAACTTCACGAA
CGCGGTGTTCTTTTGGCTGTTGCTTCCTGAGACGAAGAAATTGCCGCTTG
AAGAAATGAACTACCTGTTCTCGAATTCTCCGTGGATTGTGGCGGGTAAG
CGGAAGGAGGATTATGTTCCTCACGATTTACAGCGCAGGCTTGAGGAGGA
GGCGGAGAAGAGAGAGGTGTTTGCGACCCACAATGAAGTGAGTTGA back to topCoding sequence (CDS) from alignment at An08:380787..381832+ >CBS51388_005080-T1 ID=CBS51388_005080-T1|Name=CBS51388_005080-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2826bp|location=Sequence derived from alignment at An08:380787..381832+ (Aspergillus niger CBS 513.88)
ATGCTTTTCCCTGAGTCACCACGGTGGCTCATTGATCACGGCCAGCACGA
GAAAGGCTTGAAGACATTGGCAATGCTTCATGCCCACGGCAACGAAGAGG
ATCCTTGGGTTCGTGCGGAATTTAACCAGATTCAAGAAAGCATTGTTTAC
GAGCATGAGAACGAAGCCAAGTCCTACAAGGAACTCTTTACCTCACGATC
GTCCTTCCGTCGCCTGTTTCTTTGTTGCTCATTACAGGCATCTGTACAGA
TGACCGGCGTGTCTGCAATCCAATACTACTCTGTAACCATCTATGGTCAG
ATTGGCATTAGTGGCGACAAAACGCTACAGTATCAAGCTATCAACTCCAT
CATCGCCCTTGTAGCTCAATTCCTATGCATTCTCTTCATTGACCGAGTCG
GTCGCCGCTGGAGTTTGATCTGGGGTAACCTAGGAAACATGGTAACGTTT
ATTGTTGCCTGCATTCTGTTAGCACAGTTCCCCCCAGAAAGCCACAACAC
CGGAGCCCACTGGGGCTTTATCATCATGACTTGGCTATACAACTTCTCCT
TCTCGTGCACATGTGGCCCTCTCTCCTGGATCATCCCAGCAGAGGTATTC
GACACCCGAACGCGGTCGAAGGGCGTTTCGTTGGCTACTATGACATCGTA
TGCATTCAACACGATGATTGGGCAGGTGACGCCCATTGCCATGGAGAGTG
TGCGCTATCGGTACTATTTCCTCTTTATCATCTGCAACTTCACGAACGCG
GTGTTCTTTTGGCTGTTGCTTCCTGAGACGAAGAAATTGCCGCTTGAAGA
AATGAACTACCTGTTCTCGAATTCTCCGTGGATTGTGGCGGGTAAGCGGA
AGGAGGATTATGTTCCTCACGATTTACAGCGCAGGCTTGAGGAGGAGGCG
GAGAAGAGAGAGGTGTTTGCGACCCACAATGAAGTGAGTTGAATGCTTTT
CCCTGAGTCACCACGGTGGCTCATTGATCACGGCCAGCACGAGAAAGGCT
TGAAGACATTGGCAATGCTTCATGCCCACGGCAACGAAGAGGATCCTTGG
GTTCGTGCGGAATTTAACCAGATTCAAGAAAGCATTGTTTACGAGCATGA
GAACGAAGCCAAGTCCTACAAGGAACTCTTTACCTCACGATCGTCCTTCC
GTCGCCTGTTTCTTTGTTGCTCATTACAGGCATCTGTACAGATGACCGGC
GTGTCTGCAATCCAATACTACTCTGTAACCATCTATGGTCAGATTGGCAT
TAGTGGCGACAAAACGCTACAGTATCAAGCTATCAACTCCATCATCGCCC
TTGTAGCTCAATTCCTATGCATTCTCTTCATTGACCGAGTCGGTCGCCGC
TGGAGTTTGATCTGGGGTAACCTAGGAAACATGGTAACGTTTATTGTTGC
CTGCATTCTGTTAGCACAGTTCCCCCCAGAAAGCCACAACACCGGAGCCC
ACTGGGGCTTTATCATCATGACTTGGCTATACAACTTCTCCTTCTCGTGC
ACATGTGGCCCTCTCTCCTGGATCATCCCAGCAGAGGTATTCGACACCCG
AACGCGGTCGAAGGGCGTTTCGTTGGCTACTATGACATCGTATGCATTCA
ACACGATGATTGGGCAGGTGACGCCCATTGCCATGGAGAGTGTGCGCTAT
CGGTACTATTTCCTCTTTATCATCTGCAACTTCACGAACGCGGTGTTCTT
TTGGCTGTTGCTTCCTGAGACGAAGAAATTGCCGCTTGAAGAAATGAACT
ACCTGTTCTCGAATTCTCCGTGGATTGTGGCGGGTAAGCGGAAGGAGGAT
TATGTTCCTCACGATTTACAGCGCAGGCTTGAGGAGGAGGCGGAGAAGAG
AGAGGTGTTTGCGACCCACAATGAAGTGAGTTGAATGCTTTTCCCTGAGT
CACCACGGTGGCTCATTGATCACGGCCAGCACGAGAAAGGCTTGAAGACA
TTGGCAATGCTTCATGCCCACGGCAACGAAGAGGATCCTTGGGTTCGTGC
GGAATTTAACCAGATTCAAGAAAGCATTGTTTACGAGCATGAGAACGAAG
CCAAGTCCTACAAGGAACTCTTTACCTCACGATCGTCCTTCCGTCGCCTG
TTTCTTTGTTGCTCATTACAGGCATCTGTACAGATGACCGGCGTGTCTGC
AATCCAATACTACTCTGTAACCATCTATGGTCAGATTGGCATTAGTGGCG
ACAAAACGCTACAGTATCAAGCTATCAACTCCATCATCGCCCTTGTAGCT
CAATTCCTATGCATTCTCTTCATTGACCGAGTCGGTCGCCGCTGGAGTTT
GATCTGGGGTAACCTAGGAAACATGGTAACGTTTATTGTTGCCTGCATTC
TGTTAGCACAGTTCCCCCCAGAAAGCCACAACACCGGAGCCCACTGGGGC
TTTATCATCATGACTTGGCTATACAACTTCTCCTTCTCGTGCACATGTGG
CCCTCTCTCCTGGATCATCCCAGCAGAGGTATTCGACACCCGAACGCGGT
CGAAGGGCGTTTCGTTGGCTACTATGACATCGTATGCATTCAACACGATG
ATTGGGCAGGTGACGCCCATTGCCATGGAGAGTGTGCGCTATCGGTACTA
TTTCCTCTTTATCATCTGCAACTTCACGAACGCGGTGTTCTTTTGGCTGT
TGCTTCCTGAGACGAAGAAATTGCCGCTTGAAGAAATGAACTACCTGTTC
TCGAATTCTCCGTGGATTGTGGCGGGTAAGCGGAAGGAGGATTATGTTCC
TCACGATTTACAGCGCAGGCTTGAGGAGGAGGCGGAGAAGAGAGAGGTGT
TTGCGACCCACAATGAAGTGAGTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR005828 |
| DBxref | InterPro:IPR003663 |
| DBxref | PFAM:PF00083 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:380787..381832 + |
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