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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:388278..389766+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005084-T1 ID=CBS51388_005084-T1|Name=CBS51388_005084-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1489bp|location=Sequence derived from alignment at An08:388278..389766+ (Aspergillus niger CBS 513.88)
ATGCGAGCCATCTGGCCCCTCGTTTCTCTTTTCTCTGCCGTCAAGGCCCT
CCCCGCCGCAAGCGCAACTGCTTCAGCGTCCGTTGCTGCATCGAGCTCTC
CGGCGCCAACGGCCTCTGCTACGGGCAATCCCTTTGAGGGATACCAGCTC
TATGCGAACCCCTACTATAAGTCACAAGTGGAGAGTTCGGCCATTCCATC
ATTGTCTGCTAGTTCACTGGTCGCGCAGGCGAGTGCTGCTGCAGATGTGC
CTTCGTTCTACTGGCTGTGAGTATCCATACAGAAGAACTTTACGTGCTTA
GGCTGATGTTATGATACTCGATTTTCAGGGACACGGCCGACAAGGTACCT
ACAATGGGTGAATATCTGGAAGACATCCAGACACAAAATGCTGCTGGAGC
GAGCCCCCCAATTGCTGGTATCTTCGTTGTCTATGACCTACCAGATCGGG
ATTGTTCTGCCTTGGCTAGTAATGGGGAATACTCGATCAGTGATGGTGGT
GTGGAGAAGTACAAGGCGTACATTGATTCTATTCGGGAGCAGGTCGAGAC
GTACTCGGATGTTCAGACTATTCTGATTATTGGTATGCTTGCTTTGACTG
ATGGGTCAGACATTGAGCTGGAATAGGATACTGACTGGTCCTTACAGAAC
CCGATAGCTTGGCTAACCTGGTGACGAATCTCGATGTGGCTAAATGCGCT
AATGCTGAATCCGCTTACCTGGAATGCACCAACTATGCCCTTGAGCAACT
GAATCTGCCGAACGTGGCTATGTATCTTGATGCTGGTACGTCTTGTCCAT
TGAGGATACTGAGCATCGCTAATAATGCCCGCAGGCCATGCGGGATGGCT
GGGATGGCCTGCCAACATCGGTCCCGCGGCGCAACTCTACGCATCGGTGT
ATAAGAATGCGTCGTCCCCAGCTGCTGTTCGCGGCCTCGCCACCAATGTA
GCTAACTTCAATGCCTGGAGCATCGACTCTTGCCCCTCTTATACATCGGG
CAACGATGTCTGTGATGAGAAAAGCTACATCAATGCCATTGCGCCGGAGC
TGTCTAGTGCTGGGTTTGATGCCCACTTCATTACCGATACGGGTGAGTGA
TACTAAAAGTTATACATAGCGACATGTTCAATGTGACTCACGGCATTAGG
TCGCAATGGGAAGCAACCCACCGGTCAGAGCGCGTGGGGTGACTGGTGCA
ATGTCAAGGATACCGGCTTCGGTGCTCAACCGACGACCGATACTGGAGAC
GAGCTGGCTGATGCCTTTGTCTGGGTCAAGCCGGGCGGAGAGAGCGACGG
GACATCGGATACCAGCTCTTCTCGCTACGACGCGCATTGCGGATATAGCG
ATGCCTTGCAGCCTGCTCCGGAGGCCGGAACCTGGTTCCAGGTGGGTGTT
GGCTGAAGACTTGTTGAAGGTAGCATGCTAACACTATGTTCTAGGCATAC
TTTGAGCAACTTTTGACCAACGCCAATCCTTCCCTTTGA back to topCoding sequence (CDS) from alignment at An08:388278..389766+ >CBS51388_005084-T1 ID=CBS51388_005084-T1|Name=CBS51388_005084-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7218bp|location=Sequence derived from alignment at An08:388278..389766+ (Aspergillus niger CBS 513.88)
ATGCGAGCCATCTGGCCCCTCGTTTCTCTTTTCTCTGCCGTCAAGGCCCT
CCCCGCCGCAAGCGCAACTGCTTCAGCGTCCGTTGCTGCATCGAGCTCTC
CGGCGCCAACGGCCTCTGCTACGGGCAATCCCTTTGAGGGATACCAGCTC
TATGCGAACCCCTACTATAAGTCACAAGTGGAGAGTTCGGCCATTCCATC
ATTGTCTGCTAGTTCACTGGTCGCGCAGGCGAGTGCTGCTGCAGATGTGC
CTTCGTTCTACTGGCTGGACACGGCCGACAAGGTACCTACAATGGGTGAA
TATCTGGAAGACATCCAGACACAAAATGCTGCTGGAGCGAGCCCCCCAAT
TGCTGGTATCTTCGTTGTCTATGACCTACCAGATCGGGATTGTTCTGCCT
TGGCTAGTAATGGGGAATACTCGATCAGTGATGGTGGTGTGGAGAAGTAC
AAGGCGTACATTGATTCTATTCGGGAGCAGGTCGAGACGTACTCGGATGT
TCAGACTATTCTGATTATTGAACCCGATAGCTTGGCTAACCTGGTGACGA
ATCTCGATGTGGCTAAATGCGCTAATGCTGAATCCGCTTACCTGGAATGC
ACCAACTATGCCCTTGAGCAACTGAATCTGCCGAACGTGGCTATGTATCT
TGATGCTGGCCATGCGGGATGGCTGGGATGGCCTGCCAACATCGGTCCCG
CGGCGCAACTCTACGCATCGGTGTATAAGAATGCGTCGTCCCCAGCTGCT
GTTCGCGGCCTCGCCACCAATGTAGCTAACTTCAATGCCTGGAGCATCGA
CTCTTGCCCCTCTTATACATCGGGCAACGATGTCTGTGATGAGAAAAGCT
ACATCAATGCCATTGCGCCGGAGCTGTCTAGTGCTGGGTTTGATGCCCAC
TTCATTACCGATACGGGTCGCAATGGGAAGCAACCCACCGGTCAGAGCGC
GTGGGGTGACTGGTGCAATGTCAAGGATACCGGCTTCGGTGCTCAACCGA
CGACCGATACTGGAGACGAGCTGGCTGATGCCTTTGTCTGGGTCAAGCCG
GGCGGAGAGAGCGACGGGACATCGGATACCAGCTCTTCTCGCTACGACGC
GCATTGCGGATATAGCGATGCCTTGCAGCCTGCTCCGGAGGCCGGAACCT
GGTTCCAGGCATACTTTGAGCAACTTTTGACCAACGCCAATCCTTCCCTT
TGAATGCGAGCCATCTGGCCCCTCGTTTCTCTTTTCTCTGCCGTCAAGGC
CCTCCCCGCCGCAAGCGCAACTGCTTCAGCGTCCGTTGCTGCATCGAGCT
CTCCGGCGCCAACGGCCTCTGCTACGGGCAATCCCTTTGAGGGATACCAG
CTCTATGCGAACCCCTACTATAAGTCACAAGTGGAGAGTTCGGCCATTCC
ATCATTGTCTGCTAGTTCACTGGTCGCGCAGGCGAGTGCTGCTGCAGATG
TGCCTTCGTTCTACTGGCTGGACACGGCCGACAAGGTACCTACAATGGGT
GAATATCTGGAAGACATCCAGACACAAAATGCTGCTGGAGCGAGCCCCCC
AATTGCTGGTATCTTCGTTGTCTATGACCTACCAGATCGGGATTGTTCTG
CCTTGGCTAGTAATGGGGAATACTCGATCAGTGATGGTGGTGTGGAGAAG
TACAAGGCGTACATTGATTCTATTCGGGAGCAGGTCGAGACGTACTCGGA
TGTTCAGACTATTCTGATTATTGAACCCGATAGCTTGGCTAACCTGGTGA
CGAATCTCGATGTGGCTAAATGCGCTAATGCTGAATCCGCTTACCTGGAA
TGCACCAACTATGCCCTTGAGCAACTGAATCTGCCGAACGTGGCTATGTA
TCTTGATGCTGGCCATGCGGGATGGCTGGGATGGCCTGCCAACATCGGTC
CCGCGGCGCAACTCTACGCATCGGTGTATAAGAATGCGTCGTCCCCAGCT
GCTGTTCGCGGCCTCGCCACCAATGTAGCTAACTTCAATGCCTGGAGCAT
CGACTCTTGCCCCTCTTATACATCGGGCAACGATGTCTGTGATGAGAAAA
GCTACATCAATGCCATTGCGCCGGAGCTGTCTAGTGCTGGGTTTGATGCC
CACTTCATTACCGATACGGGTCGCAATGGGAAGCAACCCACCGGTCAGAG
CGCGTGGGGTGACTGGTGCAATGTCAAGGATACCGGCTTCGGTGCTCAAC
CGACGACCGATACTGGAGACGAGCTGGCTGATGCCTTTGTCTGGGTCAAG
CCGGGCGGAGAGAGCGACGGGACATCGGATACCAGCTCTTCTCGCTACGA
CGCGCATTGCGGATATAGCGATGCCTTGCAGCCTGCTCCGGAGGCCGGAA
CCTGGTTCCAGGCATACTTTGAGCAACTTTTGACCAACGCCAATCCTTCC
CTTTGAATGCGAGCCATCTGGCCCCTCGTTTCTCTTTTCTCTGCCGTCAA
GGCCCTCCCCGCCGCAAGCGCAACTGCTTCAGCGTCCGTTGCTGCATCGA
GCTCTCCGGCGCCAACGGCCTCTGCTACGGGCAATCCCTTTGAGGGATAC
CAGCTCTATGCGAACCCCTACTATAAGTCACAAGTGGAGAGTTCGGCCAT
TCCATCATTGTCTGCTAGTTCACTGGTCGCGCAGGCGAGTGCTGCTGCAG
ATGTGCCTTCGTTCTACTGGCTGGACACGGCCGACAAGGTACCTACAATG
GGTGAATATCTGGAAGACATCCAGACACAAAATGCTGCTGGAGCGAGCCC
CCCAATTGCTGGTATCTTCGTTGTCTATGACCTACCAGATCGGGATTGTT
CTGCCTTGGCTAGTAATGGGGAATACTCGATCAGTGATGGTGGTGTGGAG
AAGTACAAGGCGTACATTGATTCTATTCGGGAGCAGGTCGAGACGTACTC
GGATGTTCAGACTATTCTGATTATTGAACCCGATAGCTTGGCTAACCTGG
TGACGAATCTCGATGTGGCTAAATGCGCTAATGCTGAATCCGCTTACCTG
GAATGCACCAACTATGCCCTTGAGCAACTGAATCTGCCGAACGTGGCTAT
GTATCTTGATGCTGGCCATGCGGGATGGCTGGGATGGCCTGCCAACATCG
GTCCCGCGGCGCAACTCTACGCATCGGTGTATAAGAATGCGTCGTCCCCA
GCTGCTGTTCGCGGCCTCGCCACCAATGTAGCTAACTTCAATGCCTGGAG
CATCGACTCTTGCCCCTCTTATACATCGGGCAACGATGTCTGTGATGAGA
AAAGCTACATCAATGCCATTGCGCCGGAGCTGTCTAGTGCTGGGTTTGAT
GCCCACTTCATTACCGATACGGGTCGCAATGGGAAGCAACCCACCGGTCA
GAGCGCGTGGGGTGACTGGTGCAATGTCAAGGATACCGGCTTCGGTGCTC
AACCGACGACCGATACTGGAGACGAGCTGGCTGATGCCTTTGTCTGGGTC
AAGCCGGGCGGAGAGAGCGACGGGACATCGGATACCAGCTCTTCTCGCTA
CGACGCGCATTGCGGATATAGCGATGCCTTGCAGCCTGCTCCGGAGGCCG
GAACCTGGTTCCAGGCATACTTTGAGCAACTTTTGACCAACGCCAATCCT
TCCCTTTGAATGCGAGCCATCTGGCCCCTCGTTTCTCTTTTCTCTGCCGT
CAAGGCCCTCCCCGCCGCAAGCGCAACTGCTTCAGCGTCCGTTGCTGCAT
CGAGCTCTCCGGCGCCAACGGCCTCTGCTACGGGCAATCCCTTTGAGGGA
TACCAGCTCTATGCGAACCCCTACTATAAGTCACAAGTGGAGAGTTCGGC
CATTCCATCATTGTCTGCTAGTTCACTGGTCGCGCAGGCGAGTGCTGCTG
CAGATGTGCCTTCGTTCTACTGGCTGGACACGGCCGACAAGGTACCTACA
ATGGGTGAATATCTGGAAGACATCCAGACACAAAATGCTGCTGGAGCGAG
CCCCCCAATTGCTGGTATCTTCGTTGTCTATGACCTACCAGATCGGGATT
GTTCTGCCTTGGCTAGTAATGGGGAATACTCGATCAGTGATGGTGGTGTG
GAGAAGTACAAGGCGTACATTGATTCTATTCGGGAGCAGGTCGAGACGTA
CTCGGATGTTCAGACTATTCTGATTATTGAACCCGATAGCTTGGCTAACC
TGGTGACGAATCTCGATGTGGCTAAATGCGCTAATGCTGAATCCGCTTAC
CTGGAATGCACCAACTATGCCCTTGAGCAACTGAATCTGCCGAACGTGGC
TATGTATCTTGATGCTGGCCATGCGGGATGGCTGGGATGGCCTGCCAACA
TCGGTCCCGCGGCGCAACTCTACGCATCGGTGTATAAGAATGCGTCGTCC
CCAGCTGCTGTTCGCGGCCTCGCCACCAATGTAGCTAACTTCAATGCCTG
GAGCATCGACTCTTGCCCCTCTTATACATCGGGCAACGATGTCTGTGATG
AGAAAAGCTACATCAATGCCATTGCGCCGGAGCTGTCTAGTGCTGGGTTT
GATGCCCACTTCATTACCGATACGGGTCGCAATGGGAAGCAACCCACCGG
TCAGAGCGCGTGGGGTGACTGGTGCAATGTCAAGGATACCGGCTTCGGTG
CTCAACCGACGACCGATACTGGAGACGAGCTGGCTGATGCCTTTGTCTGG
GTCAAGCCGGGCGGAGAGAGCGACGGGACATCGGATACCAGCTCTTCTCG
CTACGACGCGCATTGCGGATATAGCGATGCCTTGCAGCCTGCTCCGGAGG
CCGGAACCTGGTTCCAGGCATACTTTGAGCAACTTTTGACCAACGCCAAT
CCTTCCCTTTGAATGCGAGCCATCTGGCCCCTCGTTTCTCTTTTCTCTGC
CGTCAAGGCCCTCCCCGCCGCAAGCGCAACTGCTTCAGCGTCCGTTGCTG
CATCGAGCTCTCCGGCGCCAACGGCCTCTGCTACGGGCAATCCCTTTGAG
GGATACCAGCTCTATGCGAACCCCTACTATAAGTCACAAGTGGAGAGTTC
GGCCATTCCATCATTGTCTGCTAGTTCACTGGTCGCGCAGGCGAGTGCTG
CTGCAGATGTGCCTTCGTTCTACTGGCTGGACACGGCCGACAAGGTACCT
ACAATGGGTGAATATCTGGAAGACATCCAGACACAAAATGCTGCTGGAGC
GAGCCCCCCAATTGCTGGTATCTTCGTTGTCTATGACCTACCAGATCGGG
ATTGTTCTGCCTTGGCTAGTAATGGGGAATACTCGATCAGTGATGGTGGT
GTGGAGAAGTACAAGGCGTACATTGATTCTATTCGGGAGCAGGTCGAGAC
GTACTCGGATGTTCAGACTATTCTGATTATTGAACCCGATAGCTTGGCTA
ACCTGGTGACGAATCTCGATGTGGCTAAATGCGCTAATGCTGAATCCGCT
TACCTGGAATGCACCAACTATGCCCTTGAGCAACTGAATCTGCCGAACGT
GGCTATGTATCTTGATGCTGGCCATGCGGGATGGCTGGGATGGCCTGCCA
ACATCGGTCCCGCGGCGCAACTCTACGCATCGGTGTATAAGAATGCGTCG
TCCCCAGCTGCTGTTCGCGGCCTCGCCACCAATGTAGCTAACTTCAATGC
CTGGAGCATCGACTCTTGCCCCTCTTATACATCGGGCAACGATGTCTGTG
ATGAGAAAAGCTACATCAATGCCATTGCGCCGGAGCTGTCTAGTGCTGGG
TTTGATGCCCACTTCATTACCGATACGGGTCGCAATGGGAAGCAACCCAC
CGGTCAGAGCGCGTGGGGTGACTGGTGCAATGTCAAGGATACCGGCTTCG
GTGCTCAACCGACGACCGATACTGGAGACGAGCTGGCTGATGCCTTTGTC
TGGGTCAAGCCGGGCGGAGAGAGCGACGGGACATCGGATACCAGCTCTTC
TCGCTACGACGCGCATTGCGGATATAGCGATGCCTTGCAGCCTGCTCCGG
AGGCCGGAACCTGGTTCCAGGCATACTTTGAGCAACTTTTGACCAACGCC
AATCCTTCCCTTTGAATGCGAGCCATCTGGCCCCTCGTTTCTCTTTTCTC
TGCCGTCAAGGCCCTCCCCGCCGCAAGCGCAACTGCTTCAGCGTCCGTTG
CTGCATCGAGCTCTCCGGCGCCAACGGCCTCTGCTACGGGCAATCCCTTT
GAGGGATACCAGCTCTATGCGAACCCCTACTATAAGTCACAAGTGGAGAG
TTCGGCCATTCCATCATTGTCTGCTAGTTCACTGGTCGCGCAGGCGAGTG
CTGCTGCAGATGTGCCTTCGTTCTACTGGCTGGACACGGCCGACAAGGTA
CCTACAATGGGTGAATATCTGGAAGACATCCAGACACAAAATGCTGCTGG
AGCGAGCCCCCCAATTGCTGGTATCTTCGTTGTCTATGACCTACCAGATC
GGGATTGTTCTGCCTTGGCTAGTAATGGGGAATACTCGATCAGTGATGGT
GGTGTGGAGAAGTACAAGGCGTACATTGATTCTATTCGGGAGCAGGTCGA
GACGTACTCGGATGTTCAGACTATTCTGATTATTGAACCCGATAGCTTGG
CTAACCTGGTGACGAATCTCGATGTGGCTAAATGCGCTAATGCTGAATCC
GCTTACCTGGAATGCACCAACTATGCCCTTGAGCAACTGAATCTGCCGAA
CGTGGCTATGTATCTTGATGCTGGCCATGCGGGATGGCTGGGATGGCCTG
CCAACATCGGTCCCGCGGCGCAACTCTACGCATCGGTGTATAAGAATGCG
TCGTCCCCAGCTGCTGTTCGCGGCCTCGCCACCAATGTAGCTAACTTCAA
TGCCTGGAGCATCGACTCTTGCCCCTCTTATACATCGGGCAACGATGTCT
GTGATGAGAAAAGCTACATCAATGCCATTGCGCCGGAGCTGTCTAGTGCT
GGGTTTGATGCCCACTTCATTACCGATACGGGTCGCAATGGGAAGCAACC
CACCGGTCAGAGCGCGTGGGGTGACTGGTGCAATGTCAAGGATACCGGCT
TCGGTGCTCAACCGACGACCGATACTGGAGACGAGCTGGCTGATGCCTTT
GTCTGGGTCAAGCCGGGCGGAGAGAGCGACGGGACATCGGATACCAGCTC
TTCTCGCTACGACGCGCATTGCGGATATAGCGATGCCTTGCAGCCTGCTC
CGGAGGCCGGAACCTGGTTCCAGGCATACTTTGAGCAACTTTTGACCAAC
GCCAATCCTTCCCTTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
| GO:0030245 | cellulose catabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-16) |
| Note | CAZy:GH6 |
| DBxref | InterPro:IPR001524 |
| DBxref | InterPro:IPR036434 |
| DBxref | InterPro:IPR016288 |
| DBxref | PFAM:PF01341 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:388278..389766 + |
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