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CBS51388_005087-T1, CBS51388_005087-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005087-T1
Unique NameCBS51388_005087-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:393604..394902+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005087-T1 ID=CBS51388_005087-T1|Name=CBS51388_005087-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1299bp|location=Sequence derived from alignment at An08:393604..394902+ (Aspergillus niger CBS 513.88)
ATGGCGGAGTAAGTCTTCCTGGCCCTATCAGTCTCATCTAGGGGTCCGCA
TGCTAATGCTCGCTATAGGAAAGAAGTCCCTCTCACGGCCGTCAAGGTCG
AGGCCTTGGTATGCACACCATGAAAATCTCCCCCCCACCCGCCTTTTTCA
CGGCCGGCGACGATACTTACAGCGTGGCATATAGGTGGTGATGAAGATCA
TCAAGCACGGCTCTCAGGCCTTCCCGACGACTGCGACCGGTTCGATCGTC
GGTATGGATGTCGACGGTACCCTGGAGATCACCAACAGTTTCCCTTTCCC
CGTCGTTGAGGTGCCCGCCGAATCGCACTTTGACAATACCGCTCCCAACC
CGGCTGCTGCTGCCCCCCGCGCGAAGGCCAACGCCGCCTACGAGGCTGAG
ATGGTCCGTATGATGCGCGAGGTTAACGTTGACGCCAACAACGTTGGTTG
GTACACTAGCGCCAACATGGGCAACTTCATCAACATGAACGTGATCGAGA
ACCAGTTCTTTTACCAGAAGGAGATGAACGAGCGCACGGTCGCTCTGGTG
CACGACGTCAGCCGCAGCGCACAGGGAAGCCTGAGCCTGCGCGCTTTCCG
CCTGTCTCCTAAGTTCATGGCGGCTTTCAAGGAGAACAAGTTCACTTCCG
AGGAGTACGTTCATAATACTATTGCCCCGGAGGGATGATAGACGCATGCT
AATTGGTTGTTTTTGGCAGGCTCCAAAAGTCCAACCTCAGGTACCAGGAC
ATCCTGGTCGAGCTCCCCGTTGAAATCCACAACTCTCACCTGATCACCTC
CTTCATTCACCAGCTCCAGACTCCCACTCAGGCGACTCCCTCCGATCTCC
CCCCGTCCCTGGCCGCGTTGGAGTCGTCTCAGTACGCCAAGTCGTCCGTG
CTGGCACCCAACTTCGACAACCTCTCCCTCAGCATCGACCCGTTCCTGGA
GAAGAACTGCGACCTTCTGCTTGACAGCATCGAGGTGCACCACACCGAGA
CCAACAACTTCCAGTACTACCAGCGGTCGCTCGCCCGTGAGCAGGCCAAG
ATCACCGCGTGGCAGAACAAGCGCAAGACCGAGAACGCCAGCCGCGCGGC
TCTCAAGCAGCCCCTGCTCCCCGAGGACGAGTGGCAGCGGCTGTTCAAGC
TGCCCCAGGAGCCCAGCCGCCTGGACAGCATGCTCAACAGCCGCCAGGTT
GAGCAGTACGCTCGCCAGGTCGACAGCTTCGTGTCTGCGACGACGGGTAA
GATGTTTGCCGTCAAGGGCAACCTGCTTCCGGGTGAGACGGCCAAATAG
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Coding sequence (CDS) from alignment at An08:393604..394902+

>CBS51388_005087-T1 ID=CBS51388_005087-T1|Name=CBS51388_005087-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4392bp|location=Sequence derived from alignment at An08:393604..394902+ (Aspergillus niger CBS 513.88)
ATGGCGGAGAAAGAAGTCCCTCTCACGGCCGTCAAGGTCGAGGCCTTGGT
GGTGATGAAGATCATCAAGCACGGCTCTCAGGCCTTCCCGACGACTGCGA
CCGGTTCGATCGTCGGTATGGATGTCGACGGTACCCTGGAGATCACCAAC
AGTTTCCCTTTCCCCGTCGTTGAGGTGCCCGCCGAATCGCACTTTGACAA
TACCGCTCCCAACCCGGCTGCTGCTGCCCCCCGCGCGAAGGCCAACGCCG
CCTACGAGGCTGAGATGGTCCGTATGATGCGCGAGGTTAACGTTGACGCC
AACAACGTTGGTTGGTACACTAGCGCCAACATGGGCAACTTCATCAACAT
GAACGTGATCGAGAACCAGTTCTTTTACCAGAAGGAGATGAACGAGCGCA
CGGTCGCTCTGGTGCACGACGTCAGCCGCAGCGCACAGGGAAGCCTGAGC
CTGCGCGCTTTCCGCCTGTCTCCTAAGTTCATGGCGGCTTTCAAGGAGAA
CAAGTTCACTTCCGAGGAGCTCCAAAAGTCCAACCTCAGGTACCAGGACA
TCCTGGTCGAGCTCCCCGTTGAAATCCACAACTCTCACCTGATCACCTCC
TTCATTCACCAGCTCCAGACTCCCACTCAGGCGACTCCCTCCGATCTCCC
CCCGTCCCTGGCCGCGTTGGAGTCGTCTCAGTACGCCAAGTCGTCCGTGC
TGGCACCCAACTTCGACAACCTCTCCCTCAGCATCGACCCGTTCCTGGAG
AAGAACTGCGACCTTCTGCTTGACAGCATCGAGGTGCACCACACCGAGAC
CAACAACTTCCAGTACTACCAGCGGTCGCTCGCCCGTGAGCAGGCCAAGA
TCACCGCGTGGCAGAACAAGCGCAAGACCGAGAACGCCAGCCGCGCGGCT
CTCAAGCAGCCCCTGCTCCCCGAGGACGAGTGGCAGCGGCTGTTCAAGCT
GCCCCAGGAGCCCAGCCGCCTGGACAGCATGCTCAACAGCCGCCAGGTTG
AGCAGTACGCTCGCCAGGTCGACAGCTTCGTGTCTGCGACGACGGGTAAG
ATGTTTGCCGTCAAGGGCAACCTGCTTCCGGGTGAGACGGCCAAATAGAT
GGCGGAGAAAGAAGTCCCTCTCACGGCCGTCAAGGTCGAGGCCTTGGTGG
TGATGAAGATCATCAAGCACGGCTCTCAGGCCTTCCCGACGACTGCGACC
GGTTCGATCGTCGGTATGGATGTCGACGGTACCCTGGAGATCACCAACAG
TTTCCCTTTCCCCGTCGTTGAGGTGCCCGCCGAATCGCACTTTGACAATA
CCGCTCCCAACCCGGCTGCTGCTGCCCCCCGCGCGAAGGCCAACGCCGCC
TACGAGGCTGAGATGGTCCGTATGATGCGCGAGGTTAACGTTGACGCCAA
CAACGTTGGTTGGTACACTAGCGCCAACATGGGCAACTTCATCAACATGA
ACGTGATCGAGAACCAGTTCTTTTACCAGAAGGAGATGAACGAGCGCACG
GTCGCTCTGGTGCACGACGTCAGCCGCAGCGCACAGGGAAGCCTGAGCCT
GCGCGCTTTCCGCCTGTCTCCTAAGTTCATGGCGGCTTTCAAGGAGAACA
AGTTCACTTCCGAGGAGCTCCAAAAGTCCAACCTCAGGTACCAGGACATC
CTGGTCGAGCTCCCCGTTGAAATCCACAACTCTCACCTGATCACCTCCTT
CATTCACCAGCTCCAGACTCCCACTCAGGCGACTCCCTCCGATCTCCCCC
CGTCCCTGGCCGCGTTGGAGTCGTCTCAGTACGCCAAGTCGTCCGTGCTG
GCACCCAACTTCGACAACCTCTCCCTCAGCATCGACCCGTTCCTGGAGAA
GAACTGCGACCTTCTGCTTGACAGCATCGAGGTGCACCACACCGAGACCA
ACAACTTCCAGTACTACCAGCGGTCGCTCGCCCGTGAGCAGGCCAAGATC
ACCGCGTGGCAGAACAAGCGCAAGACCGAGAACGCCAGCCGCGCGGCTCT
CAAGCAGCCCCTGCTCCCCGAGGACGAGTGGCAGCGGCTGTTCAAGCTGC
CCCAGGAGCCCAGCCGCCTGGACAGCATGCTCAACAGCCGCCAGGTTGAG
CAGTACGCTCGCCAGGTCGACAGCTTCGTGTCTGCGACGACGGGTAAGAT
GTTTGCCGTCAAGGGCAACCTGCTTCCGGGTGAGACGGCCAAATAGATGG
CGGAGAAAGAAGTCCCTCTCACGGCCGTCAAGGTCGAGGCCTTGGTGGTG
ATGAAGATCATCAAGCACGGCTCTCAGGCCTTCCCGACGACTGCGACCGG
TTCGATCGTCGGTATGGATGTCGACGGTACCCTGGAGATCACCAACAGTT
TCCCTTTCCCCGTCGTTGAGGTGCCCGCCGAATCGCACTTTGACAATACC
GCTCCCAACCCGGCTGCTGCTGCCCCCCGCGCGAAGGCCAACGCCGCCTA
CGAGGCTGAGATGGTCCGTATGATGCGCGAGGTTAACGTTGACGCCAACA
ACGTTGGTTGGTACACTAGCGCCAACATGGGCAACTTCATCAACATGAAC
GTGATCGAGAACCAGTTCTTTTACCAGAAGGAGATGAACGAGCGCACGGT
CGCTCTGGTGCACGACGTCAGCCGCAGCGCACAGGGAAGCCTGAGCCTGC
GCGCTTTCCGCCTGTCTCCTAAGTTCATGGCGGCTTTCAAGGAGAACAAG
TTCACTTCCGAGGAGCTCCAAAAGTCCAACCTCAGGTACCAGGACATCCT
GGTCGAGCTCCCCGTTGAAATCCACAACTCTCACCTGATCACCTCCTTCA
TTCACCAGCTCCAGACTCCCACTCAGGCGACTCCCTCCGATCTCCCCCCG
TCCCTGGCCGCGTTGGAGTCGTCTCAGTACGCCAAGTCGTCCGTGCTGGC
ACCCAACTTCGACAACCTCTCCCTCAGCATCGACCCGTTCCTGGAGAAGA
ACTGCGACCTTCTGCTTGACAGCATCGAGGTGCACCACACCGAGACCAAC
AACTTCCAGTACTACCAGCGGTCGCTCGCCCGTGAGCAGGCCAAGATCAC
CGCGTGGCAGAACAAGCGCAAGACCGAGAACGCCAGCCGCGCGGCTCTCA
AGCAGCCCCTGCTCCCCGAGGACGAGTGGCAGCGGCTGTTCAAGCTGCCC
CAGGAGCCCAGCCGCCTGGACAGCATGCTCAACAGCCGCCAGGTTGAGCA
GTACGCTCGCCAGGTCGACAGCTTCGTGTCTGCGACGACGGGTAAGATGT
TTGCCGTCAAGGGCAACCTGCTTCCGGGTGAGACGGCCAAATAGATGGCG
GAGAAAGAAGTCCCTCTCACGGCCGTCAAGGTCGAGGCCTTGGTGGTGAT
GAAGATCATCAAGCACGGCTCTCAGGCCTTCCCGACGACTGCGACCGGTT
CGATCGTCGGTATGGATGTCGACGGTACCCTGGAGATCACCAACAGTTTC
CCTTTCCCCGTCGTTGAGGTGCCCGCCGAATCGCACTTTGACAATACCGC
TCCCAACCCGGCTGCTGCTGCCCCCCGCGCGAAGGCCAACGCCGCCTACG
AGGCTGAGATGGTCCGTATGATGCGCGAGGTTAACGTTGACGCCAACAAC
GTTGGTTGGTACACTAGCGCCAACATGGGCAACTTCATCAACATGAACGT
GATCGAGAACCAGTTCTTTTACCAGAAGGAGATGAACGAGCGCACGGTCG
CTCTGGTGCACGACGTCAGCCGCAGCGCACAGGGAAGCCTGAGCCTGCGC
GCTTTCCGCCTGTCTCCTAAGTTCATGGCGGCTTTCAAGGAGAACAAGTT
CACTTCCGAGGAGCTCCAAAAGTCCAACCTCAGGTACCAGGACATCCTGG
TCGAGCTCCCCGTTGAAATCCACAACTCTCACCTGATCACCTCCTTCATT
CACCAGCTCCAGACTCCCACTCAGGCGACTCCCTCCGATCTCCCCCCGTC
CCTGGCCGCGTTGGAGTCGTCTCAGTACGCCAAGTCGTCCGTGCTGGCAC
CCAACTTCGACAACCTCTCCCTCAGCATCGACCCGTTCCTGGAGAAGAAC
TGCGACCTTCTGCTTGACAGCATCGAGGTGCACCACACCGAGACCAACAA
CTTCCAGTACTACCAGCGGTCGCTCGCCCGTGAGCAGGCCAAGATCACCG
CGTGGCAGAACAAGCGCAAGACCGAGAACGCCAGCCGCGCGGCTCTCAAG
CAGCCCCTGCTCCCCGAGGACGAGTGGCAGCGGCTGTTCAAGCTGCCCCA
GGAGCCCAGCCGCCTGGACAGCATGCTCAACAGCCGCCAGGTTGAGCAGT
ACGCTCGCCAGGTCGACAGCTTCGTGTCTGCGACGACGGGTAAGATGTTT
GCCGTCAAGGGCAACCTGCTTCCGGGTGAGACGGCCAAATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005852eukaryotic translation initiation factor 3 complex
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005087CBS51388_005087Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005087-T1.exon1CBS51388_005087-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_005087-T1.exon2CBS51388_005087-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_005087-T1.exon3CBS51388_005087-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_005087-T1.exon4CBS51388_005087-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005087-T1.cdsCBS51388_005087-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005087-T1CBS51388_005087-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteMEROPS:MER0021886
DBxrefInterPro:IPR037518
DBxrefInterPro:IPR027524
DBxrefInterPro:IPR000555
DBxrefPFAM:PF01398
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:393604..394902 +
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