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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:458255..460381+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005111-T1 ID=CBS51388_005111-T1|Name=CBS51388_005111-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2127bp|location=Sequence derived from alignment at An08:458255..460381+ (Aspergillus niger CBS 513.88)
ATGCTTGTTCCGAAACCTCCCGTGGATTTGGAGGGTCACTGCTCTGCTCT
ATACGACAACGCTCTCTACACCTACTCCGCCAATGGCTTTCTATCGATAC
CCCTCGAGCGCAATGGAAACTGGACCCAATTGACCATGGGTGAGGCTGTC
TCAGACGCAGCGTGTGTAATCGGTGGCACAGACGGCGATGAGACCAAGCA
ATCCCTCTATGTCATTGGCGGATCCGGCTCGTCGAGTCAACCGGGCTTGC
AGCGATACTCGTTTCAAGACAAGACGTGGACCACCATTCAACCCCCGCAA
TCGGTCATGGGGAACCGTACTCACCACAAGGCCGTCTACCTGTCGAATTC
TTCCTCTATTCTGGTCTATGGTGGCCACCAGACCGACGAAACTGTTGCAT
CTTCCGACACATACGTTCTCAGTACCGTATCGCCTTACTCCATTGCGGCC
CACAATGCGACGGAAGCGTCACCGGCCGTCAACCCGGTTCTGTTGCCATG
GAATGATCGCGAGGCGGCGTTGGTTGGCGGTACCACAACCCCAAAGAAAG
TGCACCTATTCAACCCGACTGCGGGCTGGTATGGATCCAACGTGACACTG
TCCCAGTCGCTATCCAGTGGCGTGCAGTGCGCCATTCTTGAAGGATCCGA
CGGAAGCAAGGTGCTGGAGGAGTTCGACATGGACGTTGCGCCCAACACTG
TCTCGAGCGTGGTGTTGGTGAATTCGTCCGGGAAGGAGCAGAACCCTGCT
ACCGCCATCAGTTCATCCTCGTCACGCAAACGGAAGAGAGAAGTTACCCT
CAGCAGTTACCCGACCTACGATAGTAGCCTAGCGCAGTCCACAACACGGC
AGAACTACTCCCTAGCTCAGGGGGAGGATGGGTTGGTAGTGATCTCTAGT
GGCAGTGGCACGGACTCCTTGGCCATCTTCAACCAAACCGCCAACAGCTG
GGTCAACGCTACCAAATTGTTCTACGGTGACGAGAGCCGGCAGCAGATTC
TCGGGTCATCCACAACGACGGCATCTACATCCACAGCAACGTCGACCTCC
AGCGCATCCTCCAGCGCCGGCGCCGGCGGCTCGTCCAGCAGCGATGTCGG
CACCATAGTCGGCGCCACCCTGGGAGCGATCCTGGGTGTCGCCGCTATCC
TGGTGATCATTCTCCTGCTTATCAAACGTAAGAAGCAGAATATGAAGAAA
GCCCGAGGCGAAAGCGACAAAGATCGGCTCAGTTTCCAGGACCAGGGTGT
GGAGCCATTGACCCAGTCAGCGTACCCCATGGCCAAGAGCCCAGTCCCGC
TTGCAGCTTCCTCGGTAGACTCGCTTGCAATCTTCTCGGGCAAGGTGGGT
GATGAGAAGACCCCGAGGCCGGCTGGTGCCCGTCCTACCTTTGCACAGAA
CTCGACTCCGCTGAAGTCGAGCCCTCTGACGACCATTCATTCCACCGGAG
AAGCCTCGTCACCTAGTGTGTACTCGAGTGCTGCCTTTGATAAAGAGATC
GAGGCTCAGAACTCCACCTCCGGGGGTCGCCCAGGGGACCGGAGAACCAA
TGAAGGGTGGAGTCGCTACTTCCAAGACAACAGTGCAACAAGCTTGGTTG
GAATGCAATCCCAAACTCTCCAGCCCCCATCAGGCGCATCGTCTGCCAAG
CCGCAGCCGAAAGGCGCCGCATGGCAGATGAAGACTCTCACACCCCTGGA
TTTTGGCTTCTTGGATGAGCCAAAGCCTCTAGGACAGGTAATAAGCGGTA
GCCCCACAACGGAGCATGCCTCGTCTATCATCTCCTCCGAGGGTCGCCCT
GTTGCAATCCAAGAGAGTCAGTCAGCTCGCATCTCTAGCGCTTCGTCGAT
GAGTGCCGAGCTGGAGGGTGACGGGCCCTGGCCACAGCGCAGCTGGGCGG
ACCGGCCTCCCAGTAGTACCTACAGCAGAAGTTTCTACAACCCCAGCACG
CATGTGCCTTCAATAGCAGTGCCATCCGAAAGTGACTACCGAACACTCGA
CCCGTCTCGCACCAACACACGCGGTTCAAGCGTTCTTATACCCGAAGAAG
TGGAACCGATGCCGCCACGCCATCCTACTAATGTCAACTCGGACATGAGT
TGGCTGAACTTGAATGCCGATCGATGA back to topCoding sequence (CDS) from alignment at An08:458255..460381+ >CBS51388_005111-T1 ID=CBS51388_005111-T1|Name=CBS51388_005111-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2127bp|location=Sequence derived from alignment at An08:458255..460381+ (Aspergillus niger CBS 513.88)
ATGCTTGTTCCGAAACCTCCCGTGGATTTGGAGGGTCACTGCTCTGCTCT
ATACGACAACGCTCTCTACACCTACTCCGCCAATGGCTTTCTATCGATAC
CCCTCGAGCGCAATGGAAACTGGACCCAATTGACCATGGGTGAGGCTGTC
TCAGACGCAGCGTGTGTAATCGGTGGCACAGACGGCGATGAGACCAAGCA
ATCCCTCTATGTCATTGGCGGATCCGGCTCGTCGAGTCAACCGGGCTTGC
AGCGATACTCGTTTCAAGACAAGACGTGGACCACCATTCAACCCCCGCAA
TCGGTCATGGGGAACCGTACTCACCACAAGGCCGTCTACCTGTCGAATTC
TTCCTCTATTCTGGTCTATGGTGGCCACCAGACCGACGAAACTGTTGCAT
CTTCCGACACATACGTTCTCAGTACCGTATCGCCTTACTCCATTGCGGCC
CACAATGCGACGGAAGCGTCACCGGCCGTCAACCCGGTTCTGTTGCCATG
GAATGATCGCGAGGCGGCGTTGGTTGGCGGTACCACAACCCCAAAGAAAG
TGCACCTATTCAACCCGACTGCGGGCTGGTATGGATCCAACGTGACACTG
TCCCAGTCGCTATCCAGTGGCGTGCAGTGCGCCATTCTTGAAGGATCCGA
CGGAAGCAAGGTGCTGGAGGAGTTCGACATGGACGTTGCGCCCAACACTG
TCTCGAGCGTGGTGTTGGTGAATTCGTCCGGGAAGGAGCAGAACCCTGCT
ACCGCCATCAGTTCATCCTCGTCACGCAAACGGAAGAGAGAAGTTACCCT
CAGCAGTTACCCGACCTACGATAGTAGCCTAGCGCAGTCCACAACACGGC
AGAACTACTCCCTAGCTCAGGGGGAGGATGGGTTGGTAGTGATCTCTAGT
GGCAGTGGCACGGACTCCTTGGCCATCTTCAACCAAACCGCCAACAGCTG
GGTCAACGCTACCAAATTGTTCTACGGTGACGAGAGCCGGCAGCAGATTC
TCGGGTCATCCACAACGACGGCATCTACATCCACAGCAACGTCGACCTCC
AGCGCATCCTCCAGCGCCGGCGCCGGCGGCTCGTCCAGCAGCGATGTCGG
CACCATAGTCGGCGCCACCCTGGGAGCGATCCTGGGTGTCGCCGCTATCC
TGGTGATCATTCTCCTGCTTATCAAACGTAAGAAGCAGAATATGAAGAAA
GCCCGAGGCGAAAGCGACAAAGATCGGCTCAGTTTCCAGGACCAGGGTGT
GGAGCCATTGACCCAGTCAGCGTACCCCATGGCCAAGAGCCCAGTCCCGC
TTGCAGCTTCCTCGGTAGACTCGCTTGCAATCTTCTCGGGCAAGGTGGGT
GATGAGAAGACCCCGAGGCCGGCTGGTGCCCGTCCTACCTTTGCACAGAA
CTCGACTCCGCTGAAGTCGAGCCCTCTGACGACCATTCATTCCACCGGAG
AAGCCTCGTCACCTAGTGTGTACTCGAGTGCTGCCTTTGATAAAGAGATC
GAGGCTCAGAACTCCACCTCCGGGGGTCGCCCAGGGGACCGGAGAACCAA
TGAAGGGTGGAGTCGCTACTTCCAAGACAACAGTGCAACAAGCTTGGTTG
GAATGCAATCCCAAACTCTCCAGCCCCCATCAGGCGCATCGTCTGCCAAG
CCGCAGCCGAAAGGCGCCGCATGGCAGATGAAGACTCTCACACCCCTGGA
TTTTGGCTTCTTGGATGAGCCAAAGCCTCTAGGACAGGTAATAAGCGGTA
GCCCCACAACGGAGCATGCCTCGTCTATCATCTCCTCCGAGGGTCGCCCT
GTTGCAATCCAAGAGAGTCAGTCAGCTCGCATCTCTAGCGCTTCGTCGAT
GAGTGCCGAGCTGGAGGGTGACGGGCCCTGGCCACAGCGCAGCTGGGCGG
ACCGGCCTCCCAGTAGTACCTACAGCAGAAGTTTCTACAACCCCAGCACG
CATGTGCCTTCAATAGCAGTGCCATCCGAAAGTGACTACCGAACACTCGA
CCCGTCTCGCACCAACACACGCGGTTCAAGCGTTCTTATACCCGAAGAAG
TGGAACCGATGCCGCCACGCCATCCTACTAATGTCAACTCGGACATGAGT
TGGCTGAACTTGAATGCCGATCGATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011043 |
| DBxref | InterPro:IPR015915 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:458255..460381 + |
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