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CBS51388_005116-T1, CBS51388_005116-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005116-T1
Unique NameCBS51388_005116-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:484141..485372+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005116-T1 ID=CBS51388_005116-T1|Name=CBS51388_005116-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1232bp|location=Sequence derived from alignment at An08:484141..485372+ (Aspergillus niger CBS 513.88)
ATGACGGAATCTCCGGGCTCCCCCCTCTCCTCCATTGCTTCCGACGACAT
GTCGGATCGCGACGACCTAAAGCAAGGCTTCTCCCCCTCGGGCTCCAACA
TGCCTCCCTCTAAGCGTCGTCGCACTGGTGTTGCTTCTTGGGATCGCAAT
ACTCCCGTCTCGACCACTTTCCAAGATGACCTCCCTCCTCCTTCTCCCTC
CACCTCCATCTCGTCCGATACCTCCGGCGACATTCCCAATTCTCCTAACA
CCCTCGCTCTCATCGGAGGCAGTCAGGATGATGACTACAGCGGCCAAGGC
AACGATCAAGTCACCATCTGTCGCTGGGATGGATGCGACGCCGGTGACCT
AGGCAACATGGACGGTCTCGTAAAGCACATACATGAAGAACATGTCGGGA
GCCGACAGAAGAAATACTCCTGCGAATGGTCCGATTGCAGTCGGAAGGGC
CAAACGCACGCAAGTGGCTATGCGCTGCGCGCACACATGAGAAGCCATAC
GCGAGAAAAGCCCTTCTATTGCGCTCTACCAGGTAAGTTTCCCCAGACCT
TCCCCGTTATAAGTTCCTTTCTTGTTATCCCTTGGCAGCGTCTAACATTG
TTCCTTGATATTTGCCTATAGAATGCGACCGCAGCTTCACTCGATCAGAT
GCCCTTGCCAAACACATGAGAACTGTCCATGAAACAGAGGCGCTTCGTCC
CTCCGACCCCGTACCCAAACACCACAATGTCGCTGCTTCGGCGGCAGGAA
CGCCGACCGCGACTCCGTCTGGCAAGATCCAACGATTGAAGCTGAAGCTA
TCGTTTCCACCGAAGGACGATGCAGGAGATCATAGCGAAAGTGCCAATGA
GGAGGGCGCAGGACTGGAGGACGATCTTCACGTACCTCCTGGTGGGTTGG
AGAAGGAATTCGACACCTACGAGATGCTGCTCGAAGGCCCGCAACTGTAT
CGGTTGCTTCTGAGACAGATCCATTGGGCACAGCAGGATGGCGCGGAGCT
ACGCGTCGCATGGGAAAAGATTCGCGTCAAGAGAAAGGAATCTTGGATGG
AGAAGGAGGCGATCTTCGATGATCTGATGGAGGCCGAGGTACGATTGTTC
AAGCTCCTTGATGAGAAATTCAGCGTGTCCAAGTCTGCGCCGGCAAATGG
GACGGATAATCCGCCGCAGTCGGAGCAGCCAATGGAGGTAGATGTTGCAC
AAGACCAGGGGTCTGGATCTGTTCCTCCATGA
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Coding sequence (CDS) from alignment at An08:484141..485372+

>CBS51388_005116-T1 ID=CBS51388_005116-T1|Name=CBS51388_005116-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2286bp|location=Sequence derived from alignment at An08:484141..485372+ (Aspergillus niger CBS 513.88)
ATGACGGAATCTCCGGGCTCCCCCCTCTCCTCCATTGCTTCCGACGACAT
GTCGGATCGCGACGACCTAAAGCAAGGCTTCTCCCCCTCGGGCTCCAACA
TGCCTCCCTCTAAGCGTCGTCGCACTGGTGTTGCTTCTTGGGATCGCAAT
ACTCCCGTCTCGACCACTTTCCAAGATGACCTCCCTCCTCCTTCTCCCTC
CACCTCCATCTCGTCCGATACCTCCGGCGACATTCCCAATTCTCCTAACA
CCCTCGCTCTCATCGGAGGCAGTCAGGATGATGACTACAGCGGCCAAGGC
AACGATCAAGTCACCATCTGTCGCTGGGATGGATGCGACGCCGGTGACCT
AGGCAACATGGACGGTCTCGTAAAGCACATACATGAAGAACATGTCGGGA
GCCGACAGAAGAAATACTCCTGCGAATGGTCCGATTGCAGTCGGAAGGGC
CAAACGCACGCAAGTGGCTATGCGCTGCGCGCACACATGAGAAGCCATAC
GCGAGAAAAGCCCTTCTATTGCGCTCTACCAGAATGCGACCGCAGCTTCA
CTCGATCAGATGCCCTTGCCAAACACATGAGAACTGTCCATGAAACAGAG
GCGCTTCGTCCCTCCGACCCCGTACCCAAACACCACAATGTCGCTGCTTC
GGCGGCAGGAACGCCGACCGCGACTCCGTCTGGCAAGATCCAACGATTGA
AGCTGAAGCTATCGTTTCCACCGAAGGACGATGCAGGAGATCATAGCGAA
AGTGCCAATGAGGAGGGCGCAGGACTGGAGGACGATCTTCACGTACCTCC
TGGTGGGTTGGAGAAGGAATTCGACACCTACGAGATGCTGCTCGAAGGCC
CGCAACTGTATCGGTTGCTTCTGAGACAGATCCATTGGGCACAGCAGGAT
GGCGCGGAGCTACGCGTCGCATGGGAAAAGATTCGCGTCAAGAGAAAGGA
ATCTTGGATGGAGAAGGAGGCGATCTTCGATGATCTGATGGAGGCCGAGG
TACGATTGTTCAAGCTCCTTGATGAGAAATTCAGCGTGTCCAAGTCTGCG
CCGGCAAATGGGACGGATAATCCGCCGCAGTCGGAGCAGCCAATGGAGGT
AGATGTTGCACAAGACCAGGGGTCTGGATCTGTTCCTCCATGAATGACGG
AATCTCCGGGCTCCCCCCTCTCCTCCATTGCTTCCGACGACATGTCGGAT
CGCGACGACCTAAAGCAAGGCTTCTCCCCCTCGGGCTCCAACATGCCTCC
CTCTAAGCGTCGTCGCACTGGTGTTGCTTCTTGGGATCGCAATACTCCCG
TCTCGACCACTTTCCAAGATGACCTCCCTCCTCCTTCTCCCTCCACCTCC
ATCTCGTCCGATACCTCCGGCGACATTCCCAATTCTCCTAACACCCTCGC
TCTCATCGGAGGCAGTCAGGATGATGACTACAGCGGCCAAGGCAACGATC
AAGTCACCATCTGTCGCTGGGATGGATGCGACGCCGGTGACCTAGGCAAC
ATGGACGGTCTCGTAAAGCACATACATGAAGAACATGTCGGGAGCCGACA
GAAGAAATACTCCTGCGAATGGTCCGATTGCAGTCGGAAGGGCCAAACGC
ACGCAAGTGGCTATGCGCTGCGCGCACACATGAGAAGCCATACGCGAGAA
AAGCCCTTCTATTGCGCTCTACCAGAATGCGACCGCAGCTTCACTCGATC
AGATGCCCTTGCCAAACACATGAGAACTGTCCATGAAACAGAGGCGCTTC
GTCCCTCCGACCCCGTACCCAAACACCACAATGTCGCTGCTTCGGCGGCA
GGAACGCCGACCGCGACTCCGTCTGGCAAGATCCAACGATTGAAGCTGAA
GCTATCGTTTCCACCGAAGGACGATGCAGGAGATCATAGCGAAAGTGCCA
ATGAGGAGGGCGCAGGACTGGAGGACGATCTTCACGTACCTCCTGGTGGG
TTGGAGAAGGAATTCGACACCTACGAGATGCTGCTCGAAGGCCCGCAACT
GTATCGGTTGCTTCTGAGACAGATCCATTGGGCACAGCAGGATGGCGCGG
AGCTACGCGTCGCATGGGAAAAGATTCGCGTCAAGAGAAAGGAATCTTGG
ATGGAGAAGGAGGCGATCTTCGATGATCTGATGGAGGCCGAGGTACGATT
GTTCAAGCTCCTTGATGAGAAATTCAGCGTGTCCAAGTCTGCGCCGGCAA
ATGGGACGGATAATCCGCCGCAGTCGGAGCAGCCAATGGAGGTAGATGTT
GCACAAGACCAGGGGTCTGGATCTGTTCCTCCATGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005116CBS51388_005116Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005116-T1.exon1CBS51388_005116-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_005116-T1.exon2CBS51388_005116-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005116-T1.cdsCBS51388_005116-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005116-T1CBS51388_005116-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
DBxrefPFAM:PF13912
DBxrefPFAM:PF00096
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:484141..485372 +
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