You are here

Home

CBS51388_005241-T1, CBS51388_005241-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005241-T1
Unique NameCBS51388_005241-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:889352..891050+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005241-T1 ID=CBS51388_005241-T1|Name=CBS51388_005241-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1699bp|location=Sequence derived from alignment at An08:889352..891050+ (Aspergillus niger CBS 513.88)
ATGCAGTCCGAGAGCAAGTCGGTCCAGGAGGGCCAAGTTTGGTGCTCCAG
CTCTGAAGAAGCCTCAGCAGGAGATCCGAAGGCAGAGAATGATCAGACAG
TCAAACACACCCCCCATACAATTGGCTGGGATGGCATCAATGATCCGGTA
GAGGCTTTACTGCCAGAATGTTTTTCCCCAGCTGTTATCAAATAGTTAAT
TTTGCTTGGTATGTTCACAGGATAACCCACGAAACTTCACCACCGCCAAG
AAGATCTATATCACCGCTAACCTCGCCATCTTGACCTGCCTCTCTACCTT
TGCCTCTTCCATTCTCAGTCCTGCCAGTCTTCATTTAATGACAGAATTTG
GAATCTCGAAAGAGGTTTCGATTCTTGCTACTTCGTTGTTCGTGCTGGGC
TACGTCTTCGGACCCTTGGCTTTTGGGCCAGCCTCTGAGGTCCTCGGTCG
TAAATATCCGCTCAGTCTCGGTATTTTCATCTTTGGCATTTTCTCTATCC
CGGTCGCAGTTGCTAAGAATGTGGCCACTATATTCATCTGTCGATTCATT
TGCGGAGTATTTGGCGCGGCCCCGTTAGCAATTGTGAGTCTGTTCCTCCC
AGAAGCACAACACACAACACTAACACACAACTCAGGCAGGAGGATCCCTT
GCCGACCTCTACGATCCGCTTTTTCGTGGCATCGCCGTCGCGGGATTCGC
CAGTGCAACCTTCCTGGGCCCCGTCCTAGGCCCCCTGGTCGGGGGCTTCG
TGACCATGTCCCCCCACCTCGGCTGGCGCTGGACGCAATGGCTCGTCGTG
ATCCTCAGCCTGTCCTTCGGCCTCCTCTACTTCCTCACTGTCCCCGAGAC
CTACAGCGCCGTTCTCCTGACGCGACGCGCGCACAAACGCGGCCTCCACG
ACGTCCTTCCCCCGCGCCCGAAGATGACCCTCCAGATGATCGGGCGTGTG
TACATCTTCAAACCGTTCCTCATGCTGTCCCAGGAGCCCATCCTCGCCCT
GATAACCCTCTATATGGGCTTTATCTACGGGTTCTTATATCTGTGCTTCG
AGGCCTACCCGATCACCTTCGAGCATCAGCGTGGCTGGAACCTGGGCGTC
GGGGCGCTGCCCTTCCTTGCCATCACCATCGGGGTTTTGGTGGGTGTGGT
GATTGTCATCGCGCATACCAAGACCCGGATGCAGCGAAAGCTGCAGCTGC
ACGGGGAGAATGCGCCCGAGGAGCGGCTAGTGCCCATGATGGTGGGCAGT
GTGCTGCTGCCGATCGGGATGTTCTGGTTTGCGTGGACGTCGAACCCGCA
CATTATCTGGGTGCCACAGGTGGTCGCCGGTGGCTTTATGGGCTGTGGTA
TCCTTTTGATCTTTTTGCAAGGCGTAAATTACTTGATCGATGTGTACAAG
ATGAACGCCAATTCGGCCATTTCGGCCAACGCCATGTTTCGAGGTCTGCT
GGGGGCGGGGTTTCCTTTGTTTGCTACGTATATGGTATGTCCTTGGCCAG
TTTCATTTCACTGCTGACCGAATCGTCGCACATCATTCCCGGACTGACTG
AATCACTATTCTCCTAGTTCAATAATCTTGGAGTACCATGGGCCATGTCC
CTTCTCGGATTCCTGTCCACGGCCCTCGTGCCTGTCCCGTTTTTGTTCTA
TATTTATGGGGCCAACATTCGGAAGTGGAGCAAGTTCAGTCCCTGCTAG
back to top

Coding sequence (CDS) from alignment at An08:889352..891050+

>CBS51388_005241-T1 ID=CBS51388_005241-T1|Name=CBS51388_005241-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5964bp|location=Sequence derived from alignment at An08:889352..891050+ (Aspergillus niger CBS 513.88)
ATGCAGTCCGAGAGCAAGTCGGTCCAGGAGGGCCAAGTTTGGTGCTCCAG
CTCTGAAGAAGCCTCAGCAGGAGATCCGAAGGCAGAGAATGATCAGACAG
TCAAACACACCCCCCATACAATTGGCTGGGATGGCATCAATGATCCGGAT
AACCCACGAAACTTCACCACCGCCAAGAAGATCTATATCACCGCTAACCT
CGCCATCTTGACCTGCCTCTCTACCTTTGCCTCTTCCATTCTCAGTCCTG
CCAGTCTTCATTTAATGACAGAATTTGGAATCTCGAAAGAGGTTTCGATT
CTTGCTACTTCGTTGTTCGTGCTGGGCTACGTCTTCGGACCCTTGGCTTT
TGGGCCAGCCTCTGAGGTCCTCGGTCGTAAATATCCGCTCAGTCTCGGTA
TTTTCATCTTTGGCATTTTCTCTATCCCGGTCGCAGTTGCTAAGAATGTG
GCCACTATATTCATCTGTCGATTCATTTGCGGAGTATTTGGCGCGGCCCC
GTTAGCAATTGCAGGAGGATCCCTTGCCGACCTCTACGATCCGCTTTTTC
GTGGCATCGCCGTCGCGGGATTCGCCAGTGCAACCTTCCTGGGCCCCGTC
CTAGGCCCCCTGGTCGGGGGCTTCGTGACCATGTCCCCCCACCTCGGCTG
GCGCTGGACGCAATGGCTCGTCGTGATCCTCAGCCTGTCCTTCGGCCTCC
TCTACTTCCTCACTGTCCCCGAGACCTACAGCGCCGTTCTCCTGACGCGA
CGCGCGCACAAACGCGGCCTCCACGACGTCCTTCCCCCGCGCCCGAAGAT
GACCCTCCAGATGATCGGGCGTGTGTACATCTTCAAACCGTTCCTCATGC
TGTCCCAGGAGCCCATCCTCGCCCTGATAACCCTCTATATGGGCTTTATC
TACGGGTTCTTATATCTGTGCTTCGAGGCCTACCCGATCACCTTCGAGCA
TCAGCGTGGCTGGAACCTGGGCGTCGGGGCGCTGCCCTTCCTTGCCATCA
CCATCGGGGTTTTGGTGGGTGTGGTGATTGTCATCGCGCATACCAAGACC
CGGATGCAGCGAAAGCTGCAGCTGCACGGGGAGAATGCGCCCGAGGAGCG
GCTAGTGCCCATGATGGTGGGCAGTGTGCTGCTGCCGATCGGGATGTTCT
GGTTTGCGTGGACGTCGAACCCGCACATTATCTGGGTGCCACAGGTGGTC
GCCGGTGGCTTTATGGGCTGTGGTATCCTTTTGATCTTTTTGCAAGGCGT
AAATTACTTGATCGATGTGTACAAGATGAACGCCAATTCGGCCATTTCGG
CCAACGCCATGTTTCGAGGTCTGCTGGGGGCGGGGTTTCCTTTGTTTGCT
ACGTATATGTTCAATAATCTTGGAGTACCATGGGCCATGTCCCTTCTCGG
ATTCCTGTCCACGGCCCTCGTGCCTGTCCCGTTTTTGTTCTATATTTATG
GGGCCAACATTCGGAAGTGGAGCAAGTTCAGTCCCTGCTAGATGCAGTCC
GAGAGCAAGTCGGTCCAGGAGGGCCAAGTTTGGTGCTCCAGCTCTGAAGA
AGCCTCAGCAGGAGATCCGAAGGCAGAGAATGATCAGACAGTCAAACACA
CCCCCCATACAATTGGCTGGGATGGCATCAATGATCCGGATAACCCACGA
AACTTCACCACCGCCAAGAAGATCTATATCACCGCTAACCTCGCCATCTT
GACCTGCCTCTCTACCTTTGCCTCTTCCATTCTCAGTCCTGCCAGTCTTC
ATTTAATGACAGAATTTGGAATCTCGAAAGAGGTTTCGATTCTTGCTACT
TCGTTGTTCGTGCTGGGCTACGTCTTCGGACCCTTGGCTTTTGGGCCAGC
CTCTGAGGTCCTCGGTCGTAAATATCCGCTCAGTCTCGGTATTTTCATCT
TTGGCATTTTCTCTATCCCGGTCGCAGTTGCTAAGAATGTGGCCACTATA
TTCATCTGTCGATTCATTTGCGGAGTATTTGGCGCGGCCCCGTTAGCAAT
TGCAGGAGGATCCCTTGCCGACCTCTACGATCCGCTTTTTCGTGGCATCG
CCGTCGCGGGATTCGCCAGTGCAACCTTCCTGGGCCCCGTCCTAGGCCCC
CTGGTCGGGGGCTTCGTGACCATGTCCCCCCACCTCGGCTGGCGCTGGAC
GCAATGGCTCGTCGTGATCCTCAGCCTGTCCTTCGGCCTCCTCTACTTCC
TCACTGTCCCCGAGACCTACAGCGCCGTTCTCCTGACGCGACGCGCGCAC
AAACGCGGCCTCCACGACGTCCTTCCCCCGCGCCCGAAGATGACCCTCCA
GATGATCGGGCGTGTGTACATCTTCAAACCGTTCCTCATGCTGTCCCAGG
AGCCCATCCTCGCCCTGATAACCCTCTATATGGGCTTTATCTACGGGTTC
TTATATCTGTGCTTCGAGGCCTACCCGATCACCTTCGAGCATCAGCGTGG
CTGGAACCTGGGCGTCGGGGCGCTGCCCTTCCTTGCCATCACCATCGGGG
TTTTGGTGGGTGTGGTGATTGTCATCGCGCATACCAAGACCCGGATGCAG
CGAAAGCTGCAGCTGCACGGGGAGAATGCGCCCGAGGAGCGGCTAGTGCC
CATGATGGTGGGCAGTGTGCTGCTGCCGATCGGGATGTTCTGGTTTGCGT
GGACGTCGAACCCGCACATTATCTGGGTGCCACAGGTGGTCGCCGGTGGC
TTTATGGGCTGTGGTATCCTTTTGATCTTTTTGCAAGGCGTAAATTACTT
GATCGATGTGTACAAGATGAACGCCAATTCGGCCATTTCGGCCAACGCCA
TGTTTCGAGGTCTGCTGGGGGCGGGGTTTCCTTTGTTTGCTACGTATATG
TTCAATAATCTTGGAGTACCATGGGCCATGTCCCTTCTCGGATTCCTGTC
CACGGCCCTCGTGCCTGTCCCGTTTTTGTTCTATATTTATGGGGCCAACA
TTCGGAAGTGGAGCAAGTTCAGTCCCTGCTAGATGCAGTCCGAGAGCAAG
TCGGTCCAGGAGGGCCAAGTTTGGTGCTCCAGCTCTGAAGAAGCCTCAGC
AGGAGATCCGAAGGCAGAGAATGATCAGACAGTCAAACACACCCCCCATA
CAATTGGCTGGGATGGCATCAATGATCCGGATAACCCACGAAACTTCACC
ACCGCCAAGAAGATCTATATCACCGCTAACCTCGCCATCTTGACCTGCCT
CTCTACCTTTGCCTCTTCCATTCTCAGTCCTGCCAGTCTTCATTTAATGA
CAGAATTTGGAATCTCGAAAGAGGTTTCGATTCTTGCTACTTCGTTGTTC
GTGCTGGGCTACGTCTTCGGACCCTTGGCTTTTGGGCCAGCCTCTGAGGT
CCTCGGTCGTAAATATCCGCTCAGTCTCGGTATTTTCATCTTTGGCATTT
TCTCTATCCCGGTCGCAGTTGCTAAGAATGTGGCCACTATATTCATCTGT
CGATTCATTTGCGGAGTATTTGGCGCGGCCCCGTTAGCAATTGCAGGAGG
ATCCCTTGCCGACCTCTACGATCCGCTTTTTCGTGGCATCGCCGTCGCGG
GATTCGCCAGTGCAACCTTCCTGGGCCCCGTCCTAGGCCCCCTGGTCGGG
GGCTTCGTGACCATGTCCCCCCACCTCGGCTGGCGCTGGACGCAATGGCT
CGTCGTGATCCTCAGCCTGTCCTTCGGCCTCCTCTACTTCCTCACTGTCC
CCGAGACCTACAGCGCCGTTCTCCTGACGCGACGCGCGCACAAACGCGGC
CTCCACGACGTCCTTCCCCCGCGCCCGAAGATGACCCTCCAGATGATCGG
GCGTGTGTACATCTTCAAACCGTTCCTCATGCTGTCCCAGGAGCCCATCC
TCGCCCTGATAACCCTCTATATGGGCTTTATCTACGGGTTCTTATATCTG
TGCTTCGAGGCCTACCCGATCACCTTCGAGCATCAGCGTGGCTGGAACCT
GGGCGTCGGGGCGCTGCCCTTCCTTGCCATCACCATCGGGGTTTTGGTGG
GTGTGGTGATTGTCATCGCGCATACCAAGACCCGGATGCAGCGAAAGCTG
CAGCTGCACGGGGAGAATGCGCCCGAGGAGCGGCTAGTGCCCATGATGGT
GGGCAGTGTGCTGCTGCCGATCGGGATGTTCTGGTTTGCGTGGACGTCGA
ACCCGCACATTATCTGGGTGCCACAGGTGGTCGCCGGTGGCTTTATGGGC
TGTGGTATCCTTTTGATCTTTTTGCAAGGCGTAAATTACTTGATCGATGT
GTACAAGATGAACGCCAATTCGGCCATTTCGGCCAACGCCATGTTTCGAG
GTCTGCTGGGGGCGGGGTTTCCTTTGTTTGCTACGTATATGTTCAATAAT
CTTGGAGTACCATGGGCCATGTCCCTTCTCGGATTCCTGTCCACGGCCCT
CGTGCCTGTCCCGTTTTTGTTCTATATTTATGGGGCCAACATTCGGAAGT
GGAGCAAGTTCAGTCCCTGCTAGATGCAGTCCGAGAGCAAGTCGGTCCAG
GAGGGCCAAGTTTGGTGCTCCAGCTCTGAAGAAGCCTCAGCAGGAGATCC
GAAGGCAGAGAATGATCAGACAGTCAAACACACCCCCCATACAATTGGCT
GGGATGGCATCAATGATCCGGATAACCCACGAAACTTCACCACCGCCAAG
AAGATCTATATCACCGCTAACCTCGCCATCTTGACCTGCCTCTCTACCTT
TGCCTCTTCCATTCTCAGTCCTGCCAGTCTTCATTTAATGACAGAATTTG
GAATCTCGAAAGAGGTTTCGATTCTTGCTACTTCGTTGTTCGTGCTGGGC
TACGTCTTCGGACCCTTGGCTTTTGGGCCAGCCTCTGAGGTCCTCGGTCG
TAAATATCCGCTCAGTCTCGGTATTTTCATCTTTGGCATTTTCTCTATCC
CGGTCGCAGTTGCTAAGAATGTGGCCACTATATTCATCTGTCGATTCATT
TGCGGAGTATTTGGCGCGGCCCCGTTAGCAATTGCAGGAGGATCCCTTGC
CGACCTCTACGATCCGCTTTTTCGTGGCATCGCCGTCGCGGGATTCGCCA
GTGCAACCTTCCTGGGCCCCGTCCTAGGCCCCCTGGTCGGGGGCTTCGTG
ACCATGTCCCCCCACCTCGGCTGGCGCTGGACGCAATGGCTCGTCGTGAT
CCTCAGCCTGTCCTTCGGCCTCCTCTACTTCCTCACTGTCCCCGAGACCT
ACAGCGCCGTTCTCCTGACGCGACGCGCGCACAAACGCGGCCTCCACGAC
GTCCTTCCCCCGCGCCCGAAGATGACCCTCCAGATGATCGGGCGTGTGTA
CATCTTCAAACCGTTCCTCATGCTGTCCCAGGAGCCCATCCTCGCCCTGA
TAACCCTCTATATGGGCTTTATCTACGGGTTCTTATATCTGTGCTTCGAG
GCCTACCCGATCACCTTCGAGCATCAGCGTGGCTGGAACCTGGGCGTCGG
GGCGCTGCCCTTCCTTGCCATCACCATCGGGGTTTTGGTGGGTGTGGTGA
TTGTCATCGCGCATACCAAGACCCGGATGCAGCGAAAGCTGCAGCTGCAC
GGGGAGAATGCGCCCGAGGAGCGGCTAGTGCCCATGATGGTGGGCAGTGT
GCTGCTGCCGATCGGGATGTTCTGGTTTGCGTGGACGTCGAACCCGCACA
TTATCTGGGTGCCACAGGTGGTCGCCGGTGGCTTTATGGGCTGTGGTATC
CTTTTGATCTTTTTGCAAGGCGTAAATTACTTGATCGATGTGTACAAGAT
GAACGCCAATTCGGCCATTTCGGCCAACGCCATGTTTCGAGGTCTGCTGG
GGGCGGGGTTTCCTTTGTTTGCTACGTATATGTTCAATAATCTTGGAGTA
CCATGGGCCATGTCCCTTCTCGGATTCCTGTCCACGGCCCTCGTGCCTGT
CCCGTTTTTGTTCTATATTTATGGGGCCAACATTCGGAAGTGGAGCAAGT
TCAGTCCCTGCTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005241CBS51388_005241Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005241-T1.exon1CBS51388_005241-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_005241-T1.exon2CBS51388_005241-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_005241-T1.exon3CBS51388_005241-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_005241-T1.exon4CBS51388_005241-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005241-T1.cdsCBS51388_005241-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005241-T1CBS51388_005241-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:889352..891050 +
Powered by Drupal