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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:913852..914897+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005246-T1 ID=CBS51388_005246-T1|Name=CBS51388_005246-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1046bp|location=Sequence derived from alignment at An08:913852..914897+ (Aspergillus niger CBS 513.88)
ATGCCTGCTCCGTTGATTTTCATAACTGGCGCTACTGGCTTTATTGGCAG
TGCTACCGCTGTTGAAGCCCTCAAGTCCGGATATCGACTTCGAATTGGCG
TTCGCAAGAAGTCAGAGAAACTTGAATCATTGTTGGCAGACTATCGCGAC
CGAGTGGAATTCGTCATCATCCCAGATCTCACCGAGGAGGCTGCCTTCCG
AGGAAAGCTGGATGGAGTGGACTATGTCCTCCATCTTGCATCGCCGCTTG
CCAACGGCACAGACAAAGAAGCTTTCTTCCCCCCAGCGGTGAAAGGGACC
TTGGCTGTACTCAAAGAAGCAACCAAGGTGCCAAGCATCAAGAAGATTGT
GATCACTTCGTCTATCGCTGCCCTGATTCCTATCACCGGCATACCTGAAG
GCGGTGTCATAAAAGGTAGCGTGGATGCTTGATACGTCAAAGAGACTCAA
GATGCTGATCTCGGATTTTAGAGGACAATGATTGGGATTTCGGTGTCGAC
CCAGAGGCTGATTTCGTGGATCCTAGCAATCCCGGTGCAACACCCATGAC
TCTCTACCGTGCATCCAAATTGCTTGCAAATAATGCTACGTGGGACTTTT
GGAAGAAAGAGAACCCCCATTACTCACTGGTGACTCTTCATCCGGCATTT
GTCTTTGGGCACAATCTCATGCAAGCTGCTGCCAATGAAACTTTAGGATC
CAATGGAATTATCTGGGGTAGTGTGATGGGAGGCGTCCCACTTGGAGGCA
TCACGGGTGTGCATATTCAAGATGTTGCTGAGGCACATATCAAGTCGTTG
GATCCGAAGATTCAAAACGGTTCGAAATATCTGATCTCGGGGCCGCAAAC
GACATGGAAAGAGGTGGCCCGTATTGCACACAAGTTCTACCCCAATGTTG
GTGTGAAGCTTACAGAGAGCGCTGAGGGTGGTTCTATGCCTACTGATACC
ACCAAAGCCGAAGCTGAACTAGGAATGCAATGGCGGCCGTGGGAGGAGAT
GGTGCGGGGTGTAATGGACCAACAATTGGGCTTCCTTTCGGGTTGA back to topCoding sequence (CDS) from alignment at An08:913852..914897+ >CBS51388_005246-T1 ID=CBS51388_005246-T1|Name=CBS51388_005246-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1980bp|location=Sequence derived from alignment at An08:913852..914897+ (Aspergillus niger CBS 513.88)
ATGCCTGCTCCGTTGATTTTCATAACTGGCGCTACTGGCTTTATTGGCAG
TGCTACCGCTGTTGAAGCCCTCAAGTCCGGATATCGACTTCGAATTGGCG
TTCGCAAGAAGTCAGAGAAACTTGAATCATTGTTGGCAGACTATCGCGAC
CGAGTGGAATTCGTCATCATCCCAGATCTCACCGAGGAGGCTGCCTTCCG
AGGAAAGCTGGATGGAGTGGACTATGTCCTCCATCTTGCATCGCCGCTTG
CCAACGGCACAGACAAAGAAGCTTTCTTCCCCCCAGCGGTGAAAGGGACC
TTGGCTGTACTCAAAGAAGCAACCAAGGTGCCAAGCATCAAGAAGATTGT
GATCACTTCGTCTATCGCTGCCCTGATTCCTATCACCGGCATACCTGAAG
GCGGTGTCATAAAAGAGGACAATGATTGGGATTTCGGTGTCGACCCAGAG
GCTGATTTCGTGGATCCTAGCAATCCCGGTGCAACACCCATGACTCTCTA
CCGTGCATCCAAATTGCTTGCAAATAATGCTACGTGGGACTTTTGGAAGA
AAGAGAACCCCCATTACTCACTGGTGACTCTTCATCCGGCATTTGTCTTT
GGGCACAATCTCATGCAAGCTGCTGCCAATGAAACTTTAGGATCCAATGG
AATTATCTGGGGTAGTGTGATGGGAGGCGTCCCACTTGGAGGCATCACGG
GTGTGCATATTCAAGATGTTGCTGAGGCACATATCAAGTCGTTGGATCCG
AAGATTCAAAACGGTTCGAAATATCTGATCTCGGGGCCGCAAACGACATG
GAAAGAGGTGGCCCGTATTGCACACAAGTTCTACCCCAATGTTGGTGTGA
AGCTTACAGAGAGCGCTGAGGGTGGTTCTATGCCTACTGATACCACCAAA
GCCGAAGCTGAACTAGGAATGCAATGGCGGCCGTGGGAGGAGATGGTGCG
GGGTGTAATGGACCAACAATTGGGCTTCCTTTCGGGTTGAATGCCTGCTC
CGTTGATTTTCATAACTGGCGCTACTGGCTTTATTGGCAGTGCTACCGCT
GTTGAAGCCCTCAAGTCCGGATATCGACTTCGAATTGGCGTTCGCAAGAA
GTCAGAGAAACTTGAATCATTGTTGGCAGACTATCGCGACCGAGTGGAAT
TCGTCATCATCCCAGATCTCACCGAGGAGGCTGCCTTCCGAGGAAAGCTG
GATGGAGTGGACTATGTCCTCCATCTTGCATCGCCGCTTGCCAACGGCAC
AGACAAAGAAGCTTTCTTCCCCCCAGCGGTGAAAGGGACCTTGGCTGTAC
TCAAAGAAGCAACCAAGGTGCCAAGCATCAAGAAGATTGTGATCACTTCG
TCTATCGCTGCCCTGATTCCTATCACCGGCATACCTGAAGGCGGTGTCAT
AAAAGAGGACAATGATTGGGATTTCGGTGTCGACCCAGAGGCTGATTTCG
TGGATCCTAGCAATCCCGGTGCAACACCCATGACTCTCTACCGTGCATCC
AAATTGCTTGCAAATAATGCTACGTGGGACTTTTGGAAGAAAGAGAACCC
CCATTACTCACTGGTGACTCTTCATCCGGCATTTGTCTTTGGGCACAATC
TCATGCAAGCTGCTGCCAATGAAACTTTAGGATCCAATGGAATTATCTGG
GGTAGTGTGATGGGAGGCGTCCCACTTGGAGGCATCACGGGTGTGCATAT
TCAAGATGTTGCTGAGGCACATATCAAGTCGTTGGATCCGAAGATTCAAA
ACGGTTCGAAATATCTGATCTCGGGGCCGCAAACGACATGGAAAGAGGTG
GCCCGTATTGCACACAAGTTCTACCCCAATGTTGGTGTGAAGCTTACAGA
GAGCGCTGAGGGTGGTTCTATGCCTACTGATACCACCAAAGCCGAAGCTG
AACTAGGAATGCAATGGCGGCCGTGGGAGGAGATGGTGCGGGGTGTAATG
GACCAACAATTGGGCTTCCTTTCGGGTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR001509 |
| DBxref | PFAM:PF13460 |
| DBxref | PFAM:PF01370 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:913852..914897 + |
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