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CBS51388_005248-T1, CBS51388_005248-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005248-T1
Unique NameCBS51388_005248-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:917816..919489-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005248-T1 ID=CBS51388_005248-T1|Name=CBS51388_005248-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1674bp|location=Sequence derived from alignment at An08:917816..919489- (Aspergillus niger CBS 513.88)
ATGTCTATCCTGTCGATGGTCGAGGACCGGCCCACGCCCAAGGAGGTCTA
CAACTGGCGTATCTACCTCCTGGCGGCCGTTGCCTCCTTCACCTCATGTA
TGATCGGCTACGACAGTGCTTTCATCGGCACGACTATCTCCCTCGACTCC
TTCAAGAATGAGTTCCACTGGGACTCCATGTCCACCGCGAAACAGAACCT
TGTCAGTGCCAACATCGTCTCCTGCTACCAGGCAGGCGCCTTCTTCGGCG
CCTTCTTCGCCTATCCCATCGGCCACTTCTGGGGCCGTAAGTGGGGTCTC
ATGCTGTCAGCTCTGGTCTTCACTCTGGGGGCGGGCCTGATGCTGGGTGC
CAACGGCGACCGCGGTCTGGGGTTGATCTACGGCGGTCGTGTGCTGGCTG
GCCTGGGAGTCGGCGCTGGCTCCAACTTCACCCCCATCTACATCTCCGAA
CTGGCCCCGCCTGCCATTCGAGGCCGGCTGGTCGGTGTTTACGAGCTAGG
ATGGCAGGTGGGCGGTCTCGTGGGCTTCTGGATCAACGTAAGTCTCCCCT
ACAGCATATTTACAATCTACGATCATAGCTGACTCGAGCAGTACGGAGTG
GAGCAAACCATGGCTCCCAGCCACAAGCAGTGGCTGATCCCCTTTGCCGT
CCAGCTGATCCCAGCGGGCCTGCTGATCATCGGCATTCTCTTCGTCAAAG
AGTCCCCTCGTTGGCTGTTCCTGCGTGGCCGCCGCGAGGAGGCCATCAAG
AACCTCTGCTGGATCCGCCAGATCCCTGCCGACCATATCTACATGATCGA
GGAGATCGGGGCCATCGACCAGACGCTGGAGCACCAGCGCTCCACGATCG
GGCTCGGCTTCTGGAGGCCCCTCAAGGAGGCCTGGACGAACAAGCGCATC
CTGTACCGGTTGTTCCTCGGTAGCATGCTCTTCTTCTGGCAGAACGGGTC
CGGCATCAACGCCATCAACTACTACAGCCCGACCGTGTTCAAGAGCATTG
GTCTGAAAGGCAACAGCTCCAGCCTTCTGACCACCGGCATCTTCGGCGTG
GTCAAGACCGTAGTAACGATCGTCTGGCTGCTGTACCTCATCGACCACGT
CGGCCGCCGGCTGCTGCTGCTGATCGGAGCCGCCGGCGGATCCATCTGCA
TGTGGATCGTGGGTGCATACATCAAAGTCGTGGACCCGACCCACAACCAG
AGCGACCACCTCAACGGGGGCGGCGTCGCCGCCATCTTCTTCTTCTACCT
GTGGACGGCATTCTACACGCCCTCCTGGAACGGTACACCCTGGGTCATCA
ACTCGGAGATGTTCGACCCCAACATCCGGTCTCTGGCCCAGGCGTGCGCC
GCCGGGTCCAACTGGCTCTGGAACTTCCTCATCTCGCGCTTCACGCCGCA
GATGTTCGCCAAGATGGACTATGGCGTGTACTTCTTCTTCGCCAGTCTGA
TGCTCTTGTCGATCCCCTTCGTGTTCTTCCTAGTCCCGGAGACCAAAGGT
ATCCCGCTGGAGAACATGGATCCGCTTTTCCAGACGCAGCCCGTGTGGCG
CGCCCACGCAAAGGTGTTGGCGCAGATCCACGAGGACGAGGCGCGGTTCC
GTCGTGACCTCGAGGAGTCAGGCTACACGAAGGGGAATGTTGAGCAGGTG
GAGGATACCGACCGGAAGGAATGA
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Coding sequence (CDS) from alignment at An08:917816..919489-

>CBS51388_005248-T1 ID=CBS51388_005248-T1|Name=CBS51388_005248-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3240bp|location=Sequence derived from alignment at An08:917816..919489- (Aspergillus niger CBS 513.88)
TACGGAGTGGAGCAAACCATGGCTCCCAGCCACAAGCAGTGGCTGATCCC
CTTTGCCGTCCAGCTGATCCCAGCGGGCCTGCTGATCATCGGCATTCTCT
TCGTCAAAGAGTCCCCTCGTTGGCTGTTCCTGCGTGGCCGCCGCGAGGAG
GCCATCAAGAACCTCTGCTGGATCCGCCAGATCCCTGCCGACCATATCTA
CATGATCGAGGAGATCGGGGCCATCGACCAGACGCTGGAGCACCAGCGCT
CCACGATCGGGCTCGGCTTCTGGAGGCCCCTCAAGGAGGCCTGGACGAAC
AAGCGCATCCTGTACCGGTTGTTCCTCGGTAGCATGCTCTTCTTCTGGCA
GAACGGGTCCGGCATCAACGCCATCAACTACTACAGCCCGACCGTGTTCA
AGAGCATTGGTCTGAAAGGCAACAGCTCCAGCCTTCTGACCACCGGCATC
TTCGGCGTGGTCAAGACCGTAGTAACGATCGTCTGGCTGCTGTACCTCAT
CGACCACGTCGGCCGCCGGCTGCTGCTGCTGATCGGAGCCGCCGGCGGAT
CCATCTGCATGTGGATCGTGGGTGCATACATCAAAGTCGTGGACCCGACC
CACAACCAGAGCGACCACCTCAACGGGGGCGGCGTCGCCGCCATCTTCTT
CTTCTACCTGTGGACGGCATTCTACACGCCCTCCTGGAACGGTACACCCT
GGGTCATCAACTCGGAGATGTTCGACCCCAACATCCGGTCTCTGGCCCAG
GCGTGCGCCGCCGGGTCCAACTGGCTCTGGAACTTCCTCATCTCGCGCTT
CACGCCGCAGATGTTCGCCAAGATGGACTATGGCGTGTACTTCTTCTTCG
CCAGTCTGATGCTCTTGTCGATCCCCTTCGTGTTCTTCCTAGTCCCGGAG
ACCAAAGGTATCCCGCTGGAGAACATGGATCCGCTTTTCCAGACGCAGCC
CGTGTGGCGCGCCCACGCAAAGGTGTTGGCGCAGATCCACGAGGACGAGG
CGCGGTTCCGTCGTGACCTCGAGGAGTCAGGCTACACGAAGGGGAATGTT
GAGCAGGTGGAGGATACCGACCGGAAGGAATGAATGTCTATCCTGTCGAT
GGTCGAGGACCGGCCCACGCCCAAGGAGGTCTACAACTGGCGTATCTACC
TCCTGGCGGCCGTTGCCTCCTTCACCTCATGTATGATCGGCTACGACAGT
GCTTTCATCGGCACGACTATCTCCCTCGACTCCTTCAAGAATGAGTTCCA
CTGGGACTCCATGTCCACCGCGAAACAGAACCTTGTCAGTGCCAACATCG
TCTCCTGCTACCAGGCAGGCGCCTTCTTCGGCGCCTTCTTCGCCTATCCC
ATCGGCCACTTCTGGGGCCGTAAGTGGGGTCTCATGCTGTCAGCTCTGGT
CTTCACTCTGGGGGCGGGCCTGATGCTGGGTGCCAACGGCGACCGCGGTC
TGGGGTTGATCTACGGCGGTCGTGTGCTGGCTGGCCTGGGAGTCGGCGCT
GGCTCCAACTTCACCCCCATCTACATCTCCGAACTGGCCCCGCCTGCCAT
TCGAGGCCGGCTGGTCGGTGTTTACGAGCTAGGATGGCAGGTGGGCGGTC
TCGTGGGCTTCTGGATCAACTACGGAGTGGAGCAAACCATGGCTCCCAGC
CACAAGCAGTGGCTGATCCCCTTTGCCGTCCAGCTGATCCCAGCGGGCCT
GCTGATCATCGGCATTCTCTTCGTCAAAGAGTCCCCTCGTTGGCTGTTCC
TGCGTGGCCGCCGCGAGGAGGCCATCAAGAACCTCTGCTGGATCCGCCAG
ATCCCTGCCGACCATATCTACATGATCGAGGAGATCGGGGCCATCGACCA
GACGCTGGAGCACCAGCGCTCCACGATCGGGCTCGGCTTCTGGAGGCCCC
TCAAGGAGGCCTGGACGAACAAGCGCATCCTGTACCGGTTGTTCCTCGGT
AGCATGCTCTTCTTCTGGCAGAACGGGTCCGGCATCAACGCCATCAACTA
CTACAGCCCGACCGTGTTCAAGAGCATTGGTCTGAAAGGCAACAGCTCCA
GCCTTCTGACCACCGGCATCTTCGGCGTGGTCAAGACCGTAGTAACGATC
GTCTGGCTGCTGTACCTCATCGACCACGTCGGCCGCCGGCTGCTGCTGCT
GATCGGAGCCGCCGGCGGATCCATCTGCATGTGGATCGTGGGTGCATACA
TCAAAGTCGTGGACCCGACCCACAACCAGAGCGACCACCTCAACGGGGGC
GGCGTCGCCGCCATCTTCTTCTTCTACCTGTGGACGGCATTCTACACGCC
CTCCTGGAACGGTACACCCTGGGTCATCAACTCGGAGATGTTCGACCCCA
ACATCCGGTCTCTGGCCCAGGCGTGCGCCGCCGGGTCCAACTGGCTCTGG
AACTTCCTCATCTCGCGCTTCACGCCGCAGATGTTCGCCAAGATGGACTA
TGGCGTGTACTTCTTCTTCGCCAGTCTGATGCTCTTGTCGATCCCCTTCG
TGTTCTTCCTAGTCCCGGAGACCAAAGGTATCCCGCTGGAGAACATGGAT
CCGCTTTTCCAGACGCAGCCCGTGTGGCGCGCCCACGCAAAGGTGTTGGC
GCAGATCCACGAGGACGAGGCGCGGTTCCGTCGTGACCTCGAGGAGTCAG
GCTACACGAAGGGGAATGTTGAGCAGGTGGAGGATACCGACCGGAAGGAA
TGAATGTCTATCCTGTCGATGGTCGAGGACCGGCCCACGCCCAAGGAGGT
CTACAACTGGCGTATCTACCTCCTGGCGGCCGTTGCCTCCTTCACCTCAT
GTATGATCGGCTACGACAGTGCTTTCATCGGCACGACTATCTCCCTCGAC
TCCTTCAAGAATGAGTTCCACTGGGACTCCATGTCCACCGCGAAACAGAA
CCTTGTCAGTGCCAACATCGTCTCCTGCTACCAGGCAGGCGCCTTCTTCG
GCGCCTTCTTCGCCTATCCCATCGGCCACTTCTGGGGCCGTAAGTGGGGT
CTCATGCTGTCAGCTCTGGTCTTCACTCTGGGGGCGGGCCTGATGCTGGG
TGCCAACGGCGACCGCGGTCTGGGGTTGATCTACGGCGGTCGTGTGCTGG
CTGGCCTGGGAGTCGGCGCTGGCTCCAACTTCACCCCCATCTACATCTCC
GAACTGGCCCCGCCTGCCATTCGAGGCCGGCTGGTCGGTGTTTACGAGCT
AGGATGGCAGGTGGGCGGTCTCGTGGGCTTCTGGATCAAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005248CBS51388_005248Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005248-T1CBS51388_005248-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005248-T1.cdsCBS51388_005248-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005248-T1.exon2CBS51388_005248-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_005248-T1.exon1CBS51388_005248-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:917816..919489 -
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