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CBS51388_005277-T1, CBS51388_005277-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005277-T1
Unique NameCBS51388_005277-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:996917..997967-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005277-T1 ID=CBS51388_005277-T1|Name=CBS51388_005277-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1051bp|location=Sequence derived from alignment at An08:996917..997967- (Aspergillus niger CBS 513.88)
ATGCCTCCCCGGCTCCAATTGCTGCCCTTCCAATGGCAGCGGCCAATGGC
CACCACCACGACGAACCTCCTCTCCGCCTTCCTCCTGCCCCCAGCCGTCC
ACCAACAGAGTCGGAACGCGCACATCCTCGCCTCGCTCTCCGATACCCAG
GGCGCCTACAACAAGCGCATCAGAAGAGGTCGTGGTCCTGCCTCCGGCAA
GGGTAAAACCTCCGGAAGAGGTCACAAGGGTCAGAAGCAGCATGGAAAGG
TCCCCGCTGCGTTTAATGGTGGTCAAACGCCGGATATTATTGTTCATGGT
GAGAGGGGGTTTAATAATGTGTATGTTTTCCCCCTTCCCCTCCGCCCTTG
TCATCTTTGACACGGAGAGAAAGATGATCTTGAATAAATTCTAACGAGAA
TCAATGGGATCGGATAGTCACTCCATCGACCTCGCCCCCGTGAACCTCGA
CCGGATCCAATCCTGGATCGACCAAGGCCGCATCGACCCAACCCGCCCCA
TCACGGTCCGCGAACTCGCTCAGTCGCGCTGCATCCATCAGACCAAAGAA
GGCGTGAAGCTTCTCGGCCGCGGCGTGGAGAAGGACGACCACGAGGTTCC
CGTCGACAGTGTGCTCAAGCAGCCTATTCATATCGTTGTGTCGAGGGCTT
CGGCGTCTGCTATCGCGGCTGTTGAGGCGGCTGGTGGGTCTGTCACCACG
AGGTTCTATACCAAGTCTGCGATTGCGCGGATCATGAAGCGCGAGATGCA
TCCGTTTGTGTCGCTTGCGTGGACCAAGGAGAGTGGGAGTGAGGCGTTGG
CGGTTGGTGAGGATGGAGAGGCCTTGACGGAGTCGAAGGTTATGAAGGAG
ATGGGGTTCGCGTATAGATTGCCGGATCCGACTAAGAGAAGGGATATTGA
GTATTATAGGGACCCAGCGCATAGGGGGTACCTCAGTCATTTGCTGAAGC
CGATGGAAGGCCCGAGTTTGTTCTTCAGGTCGCCTGTGGAGCGGAAGTCT
GCTGCTGGTGTTAGGAAGGAGAAGGTGTTGCCTGAGAATAGGCTTTGGTG
A
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Coding sequence (CDS) from alignment at An08:996917..997967-

>CBS51388_005277-T1 ID=CBS51388_005277-T1|Name=CBS51388_005277-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1908bp|location=Sequence derived from alignment at An08:996917..997967- (Aspergillus niger CBS 513.88)
TCACTCCATCGACCTCGCCCCCGTGAACCTCGACCGGATCCAATCCTGGA
TCGACCAAGGCCGCATCGACCCAACCCGCCCCATCACGGTCCGCGAACTC
GCTCAGTCGCGCTGCATCCATCAGACCAAAGAAGGCGTGAAGCTTCTCGG
CCGCGGCGTGGAGAAGGACGACCACGAGGTTCCCGTCGACAGTGTGCTCA
AGCAGCCTATTCATATCGTTGTGTCGAGGGCTTCGGCGTCTGCTATCGCG
GCTGTTGAGGCGGCTGGTGGGTCTGTCACCACGAGGTTCTATACCAAGTC
TGCGATTGCGCGGATCATGAAGCGCGAGATGCATCCGTTTGTGTCGCTTG
CGTGGACCAAGGAGAGTGGGAGTGAGGCGTTGGCGGTTGGTGAGGATGGA
GAGGCCTTGACGGAGTCGAAGGTTATGAAGGAGATGGGGTTCGCGTATAG
ATTGCCGGATCCGACTAAGAGAAGGGATATTGAGTATTATAGGGACCCAG
CGCATAGGGGGTACCTCAGTCATTTGCTGAAGCCGATGGAAGGCCCGAGT
TTGTTCTTCAGGTCGCCTGTGGAGCGGAAGTCTGCTGCTGGTGTTAGGAA
GGAGAAGGTGTTGCCTGAGAATAGGCTTTGGTGAATGCCTCCCCGGCTCC
AATTGCTGCCCTTCCAATGGCAGCGGCCAATGGCCACCACCACGACGAAC
CTCCTCTCCGCCTTCCTCCTGCCCCCAGCCGTCCACCAACAGAGTCGGAA
CGCGCACATCCTCGCCTCGCTCTCCGATACCCAGGGCGCCTACAACAAGC
GCATCAGAAGAGGTCGTGGTCCTGCCTCCGGCAAGGGTAAAACCTCCGGA
AGAGGTCACAAGGGTCAGAAGCAGCATGGAAAGGTCCCCGCTGCGTTTAA
TGGTGGTCAAACGCCGGATATTATTGTTCATGGTGAGAGGGGGTTTAATA
ATGTTCACTCCATCGACCTCGCCCCCGTGAACCTCGACCGGATCCAATCC
TGGATCGACCAAGGCCGCATCGACCCAACCCGCCCCATCACGGTCCGCGA
ACTCGCTCAGTCGCGCTGCATCCATCAGACCAAAGAAGGCGTGAAGCTTC
TCGGCCGCGGCGTGGAGAAGGACGACCACGAGGTTCCCGTCGACAGTGTG
CTCAAGCAGCCTATTCATATCGTTGTGTCGAGGGCTTCGGCGTCTGCTAT
CGCGGCTGTTGAGGCGGCTGGTGGGTCTGTCACCACGAGGTTCTATACCA
AGTCTGCGATTGCGCGGATCATGAAGCGCGAGATGCATCCGTTTGTGTCG
CTTGCGTGGACCAAGGAGAGTGGGAGTGAGGCGTTGGCGGTTGGTGAGGA
TGGAGAGGCCTTGACGGAGTCGAAGGTTATGAAGGAGATGGGGTTCGCGT
ATAGATTGCCGGATCCGACTAAGAGAAGGGATATTGAGTATTATAGGGAC
CCAGCGCATAGGGGGTACCTCAGTCATTTGCTGAAGCCGATGGAAGGCCC
GAGTTTGTTCTTCAGGTCGCCTGTGGAGCGGAAGTCTGCTGCTGGTGTTA
GGAAGGAGAAGGTGTTGCCTGAGAATAGGCTTTGGTGAATGCCTCCCCGG
CTCCAATTGCTGCCCTTCCAATGGCAGCGGCCAATGGCCACCACCACGAC
GAACCTCCTCTCCGCCTTCCTCCTGCCCCCAGCCGTCCACCAACAGAGTC
GGAACGCGCACATCCTCGCCTCGCTCTCCGATACCCAGGGCGCCTACAAC
AAGCGCATCAGAAGAGGTCGTGGTCCTGCCTCCGGCAAGGGTAAAACCTC
CGGAAGAGGTCACAAGGGTCAGAAGCAGCATGGAAAGGTCCCCGCTGCGT
TTAATGGTGGTCAAACGCCGGATATTATTGTTCATGGTGAGAGGGGGTTT
AATAATGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015934large ribosomal subunit
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005277CBS51388_005277Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005277-T1CBS51388_005277-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005277-T1.cdsCBS51388_005277-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005277-T1.exon2CBS51388_005277-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_005277-T1.exon1CBS51388_005277-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG09264A2D
DBxrefInterPro:IPR036227
DBxrefInterPro:IPR030878
DBxrefInterPro:IPR005749
DBxrefInterPro:IPR021131
DBxrefPFAM:PF00828
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:996917..997967 -
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