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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:1024136..1025503+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005281-T1 ID=CBS51388_005281-T1|Name=CBS51388_005281-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1368bp|location=Sequence derived from alignment at An08:1024136..1025503+ (Aspergillus niger CBS 513.88)
ATGTGTCGTCTCCTGGTATGTAAGCCCGTTCTGACCATCCACGTCATACA
GCCAGCCTGAACTGACCGCTTGTCGCCAGGTATACAAAGGCAGGCATGAG
ATTCGTCTCAGCAAGCTAGTCACGGAGCCAAGCCATTCCATCCTCACCCA
GTCCTACGACTCCCGTTTAAGACTAGTAAGTCCATCATCATCATCATCAT
CATCCTCTGTAGTGTTCAAGTAAAGGACCATACTGCCCGGGAACCGTCTT
GCCCCCTATCCCAGACCAACAGCCAAAACTAACCCCATATACAGGACAAC
CGCCGCCCCGTCAACGGCGATGGCTTCGGTGTAGGCTTTTACACGGACCC
CAAACTAGGTCCAGAGCCATGCATCTTCACATCGACGCTCCCAGCCTGGA
ATTGCGAGAACTTAGAGCGCCTAGCTTCTAAGACATGCTCGAATCTAATC
TTCGCGCACGTGCGCGCAACCACAGAGGGAACCCTCTCCGACACGAACTG
CCACCCTTTCCAGCATAGCACGCTGATGTGGATGCACAACGGCAACGTCG
GCGGCTGGCAGTACATCAAGCGGCCGCTGGCCGACTCGCTCGCAGACAAA
TGGTTCCTCGGCGTCAAGGGTGGGACGGATAGCGAGTGGGCATTCGCGCT
ATTCCTTGACCTTCTCGAGAAAGAAGGTGTGGACCCTAGCTCTGATCCCG
GCCCGGGAGGGTTCGGACAAGCGCTGCTGCGTCGGGTGATGGTGAAGACG
ATTGCCAAGATCAATGAGTTCATTCGCGACATTCCCAAGAGACATAATGT
GTCGAATGTGGAGACTCGCAGTTTGCTCAACTTTGCTGTTACGGATGGGC
AGACGGTTATCTGTACGAGGTATATCAGTAGTAAGACGGATGAACCGGCT
AGTTTGTACTTTTCGTCCGGGACGAAATGGGTGGAGGGGAAGGATAAGGG
ACATTTCAAGATGGAGAGGCATGATAAGGGAGCTGATATCGTGCTTGTGG
CTAGTGAGCCGATTACATTTGAGAGACGTGAGTGTTTTGCATTGTTCCTA
CGGAAAAGAGAGACATATACTAACTGACTTGCTTTAGACAACTGGGTCTC
CGTCCCTGCTAACTCCATCGTCACCATCCACAAGCAAACCGTCCTGCTAC
ATCCCATCATGGATGAGTTCTACGTCGAGGACCTGAACCAGGACCGCTCC
TCCTGCTACGCCGTGTCCAAGGGCCTCGTTAGCACAGCCCCTGGGACAAC
AGTGCAGCCCCGTGATGCAGGGGCTGTTGACACCAATGCCGGTGCTATCC
ATGGCAATGGGTCTGCGCTGGATTCGCAGCAAATCAATCTCGCAAACAAG
TGCGCTTTATCACATTGA back to topCoding sequence (CDS) from alignment at An08:1024136..1025503+ >CBS51388_005281-T1 ID=CBS51388_005281-T1|Name=CBS51388_005281-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4500bp|location=Sequence derived from alignment at An08:1024136..1025503+ (Aspergillus niger CBS 513.88)
ATGTGTCGTCTCCTGGTATACAAAGGCAGGCATGAGATTCGTCTCAGCAA
GCTAGTCACGGAGCCAAGCCATTCCATCCTCACCCAGTCCTACGACTCCC
GTTTAAGACTAGACAACCGCCGCCCCGTCAACGGCGATGGCTTCGGTGTA
GGCTTTTACACGGACCCCAAACTAGGTCCAGAGCCATGCATCTTCACATC
GACGCTCCCAGCCTGGAATTGCGAGAACTTAGAGCGCCTAGCTTCTAAGA
CATGCTCGAATCTAATCTTCGCGCACGTGCGCGCAACCACAGAGGGAACC
CTCTCCGACACGAACTGCCACCCTTTCCAGCATAGCACGCTGATGTGGAT
GCACAACGGCAACGTCGGCGGCTGGCAGTACATCAAGCGGCCGCTGGCCG
ACTCGCTCGCAGACAAATGGTTCCTCGGCGTCAAGGGTGGGACGGATAGC
GAGTGGGCATTCGCGCTATTCCTTGACCTTCTCGAGAAAGAAGGTGTGGA
CCCTAGCTCTGATCCCGGCCCGGGAGGGTTCGGACAAGCGCTGCTGCGTC
GGGTGATGGTGAAGACGATTGCCAAGATCAATGAGTTCATTCGCGACATT
CCCAAGAGACATAATGTGTCGAATGTGGAGACTCGCAGTTTGCTCAACTT
TGCTGTTACGGATGGGCAGACGGTTATCTGTACGAGGTATATCAGTAGTA
AGACGGATGAACCGGCTAGTTTGTACTTTTCGTCCGGGACGAAATGGGTG
GAGGGGAAGGATAAGGGACATTTCAAGATGGAGAGGCATGATAAGGGAGC
TGATATCGTGCTTGTGGCTAGTGAGCCGATTACATTTGAGAGACACAACT
GGGTCTCCGTCCCTGCTAACTCCATCGTCACCATCCACAAGCAAACCGTC
CTGCTACATCCCATCATGGATGAGTTCTACGTCGAGGACCTGAACCAGGA
CCGCTCCTCCTGCTACGCCGTGTCCAAGGGCCTCGTTAGCACAGCCCCTG
GGACAACAGTGCAGCCCCGTGATGCAGGGGCTGTTGACACCAATGCCGGT
GCTATCCATGGCAATGGGTCTGCGCTGGATTCGCAGCAAATCAATCTCGC
AAACAAGTGCGCTTTATCACATTGAATGTGTCGTCTCCTGGTATACAAAG
GCAGGCATGAGATTCGTCTCAGCAAGCTAGTCACGGAGCCAAGCCATTCC
ATCCTCACCCAGTCCTACGACTCCCGTTTAAGACTAGACAACCGCCGCCC
CGTCAACGGCGATGGCTTCGGTGTAGGCTTTTACACGGACCCCAAACTAG
GTCCAGAGCCATGCATCTTCACATCGACGCTCCCAGCCTGGAATTGCGAG
AACTTAGAGCGCCTAGCTTCTAAGACATGCTCGAATCTAATCTTCGCGCA
CGTGCGCGCAACCACAGAGGGAACCCTCTCCGACACGAACTGCCACCCTT
TCCAGCATAGCACGCTGATGTGGATGCACAACGGCAACGTCGGCGGCTGG
CAGTACATCAAGCGGCCGCTGGCCGACTCGCTCGCAGACAAATGGTTCCT
CGGCGTCAAGGGTGGGACGGATAGCGAGTGGGCATTCGCGCTATTCCTTG
ACCTTCTCGAGAAAGAAGGTGTGGACCCTAGCTCTGATCCCGGCCCGGGA
GGGTTCGGACAAGCGCTGCTGCGTCGGGTGATGGTGAAGACGATTGCCAA
GATCAATGAGTTCATTCGCGACATTCCCAAGAGACATAATGTGTCGAATG
TGGAGACTCGCAGTTTGCTCAACTTTGCTGTTACGGATGGGCAGACGGTT
ATCTGTACGAGGTATATCAGTAGTAAGACGGATGAACCGGCTAGTTTGTA
CTTTTCGTCCGGGACGAAATGGGTGGAGGGGAAGGATAAGGGACATTTCA
AGATGGAGAGGCATGATAAGGGAGCTGATATCGTGCTTGTGGCTAGTGAG
CCGATTACATTTGAGAGACACAACTGGGTCTCCGTCCCTGCTAACTCCAT
CGTCACCATCCACAAGCAAACCGTCCTGCTACATCCCATCATGGATGAGT
TCTACGTCGAGGACCTGAACCAGGACCGCTCCTCCTGCTACGCCGTGTCC
AAGGGCCTCGTTAGCACAGCCCCTGGGACAACAGTGCAGCCCCGTGATGC
AGGGGCTGTTGACACCAATGCCGGTGCTATCCATGGCAATGGGTCTGCGC
TGGATTCGCAGCAAATCAATCTCGCAAACAAGTGCGCTTTATCACATTGA
ATGTGTCGTCTCCTGGTATACAAAGGCAGGCATGAGATTCGTCTCAGCAA
GCTAGTCACGGAGCCAAGCCATTCCATCCTCACCCAGTCCTACGACTCCC
GTTTAAGACTAGACAACCGCCGCCCCGTCAACGGCGATGGCTTCGGTGTA
GGCTTTTACACGGACCCCAAACTAGGTCCAGAGCCATGCATCTTCACATC
GACGCTCCCAGCCTGGAATTGCGAGAACTTAGAGCGCCTAGCTTCTAAGA
CATGCTCGAATCTAATCTTCGCGCACGTGCGCGCAACCACAGAGGGAACC
CTCTCCGACACGAACTGCCACCCTTTCCAGCATAGCACGCTGATGTGGAT
GCACAACGGCAACGTCGGCGGCTGGCAGTACATCAAGCGGCCGCTGGCCG
ACTCGCTCGCAGACAAATGGTTCCTCGGCGTCAAGGGTGGGACGGATAGC
GAGTGGGCATTCGCGCTATTCCTTGACCTTCTCGAGAAAGAAGGTGTGGA
CCCTAGCTCTGATCCCGGCCCGGGAGGGTTCGGACAAGCGCTGCTGCGTC
GGGTGATGGTGAAGACGATTGCCAAGATCAATGAGTTCATTCGCGACATT
CCCAAGAGACATAATGTGTCGAATGTGGAGACTCGCAGTTTGCTCAACTT
TGCTGTTACGGATGGGCAGACGGTTATCTGTACGAGGTATATCAGTAGTA
AGACGGATGAACCGGCTAGTTTGTACTTTTCGTCCGGGACGAAATGGGTG
GAGGGGAAGGATAAGGGACATTTCAAGATGGAGAGGCATGATAAGGGAGC
TGATATCGTGCTTGTGGCTAGTGAGCCGATTACATTTGAGAGACACAACT
GGGTCTCCGTCCCTGCTAACTCCATCGTCACCATCCACAAGCAAACCGTC
CTGCTACATCCCATCATGGATGAGTTCTACGTCGAGGACCTGAACCAGGA
CCGCTCCTCCTGCTACGCCGTGTCCAAGGGCCTCGTTAGCACAGCCCCTG
GGACAACAGTGCAGCCCCGTGATGCAGGGGCTGTTGACACCAATGCCGGT
GCTATCCATGGCAATGGGTCTGCGCTGGATTCGCAGCAAATCAATCTCGC
AAACAAGTGCGCTTTATCACATTGAATGTGTCGTCTCCTGGTATACAAAG
GCAGGCATGAGATTCGTCTCAGCAAGCTAGTCACGGAGCCAAGCCATTCC
ATCCTCACCCAGTCCTACGACTCCCGTTTAAGACTAGACAACCGCCGCCC
CGTCAACGGCGATGGCTTCGGTGTAGGCTTTTACACGGACCCCAAACTAG
GTCCAGAGCCATGCATCTTCACATCGACGCTCCCAGCCTGGAATTGCGAG
AACTTAGAGCGCCTAGCTTCTAAGACATGCTCGAATCTAATCTTCGCGCA
CGTGCGCGCAACCACAGAGGGAACCCTCTCCGACACGAACTGCCACCCTT
TCCAGCATAGCACGCTGATGTGGATGCACAACGGCAACGTCGGCGGCTGG
CAGTACATCAAGCGGCCGCTGGCCGACTCGCTCGCAGACAAATGGTTCCT
CGGCGTCAAGGGTGGGACGGATAGCGAGTGGGCATTCGCGCTATTCCTTG
ACCTTCTCGAGAAAGAAGGTGTGGACCCTAGCTCTGATCCCGGCCCGGGA
GGGTTCGGACAAGCGCTGCTGCGTCGGGTGATGGTGAAGACGATTGCCAA
GATCAATGAGTTCATTCGCGACATTCCCAAGAGACATAATGTGTCGAATG
TGGAGACTCGCAGTTTGCTCAACTTTGCTGTTACGGATGGGCAGACGGTT
ATCTGTACGAGGTATATCAGTAGTAAGACGGATGAACCGGCTAGTTTGTA
CTTTTCGTCCGGGACGAAATGGGTGGAGGGGAAGGATAAGGGACATTTCA
AGATGGAGAGGCATGATAAGGGAGCTGATATCGTGCTTGTGGCTAGTGAG
CCGATTACATTTGAGAGACACAACTGGGTCTCCGTCCCTGCTAACTCCAT
CGTCACCATCCACAAGCAAACCGTCCTGCTACATCCCATCATGGATGAGT
TCTACGTCGAGGACCTGAACCAGGACCGCTCCTCCTGCTACGCCGTGTCC
AAGGGCCTCGTTAGCACAGCCCCTGGGACAACAGTGCAGCCCCGTGATGC
AGGGGCTGTTGACACCAATGCCGGTGCTATCCATGGCAATGGGTCTGCGC
TGGATTCGCAGCAAATCAATCTCGCAAACAAGTGCGCTTTATCACATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR017932 |
| DBxref | InterPro:IPR029055 |
| DBxref | InterPro:IPR026869 |
| DBxref | PFAM:PF13522 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:1024136..1025503 + |
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