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CBS51388_005288-T1, CBS51388_005288-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005288-T1
Unique NameCBS51388_005288-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:1057552..1058525+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005288-T1 ID=CBS51388_005288-T1|Name=CBS51388_005288-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=974bp|location=Sequence derived from alignment at An08:1057552..1058525+ (Aspergillus niger CBS 513.88)
ATGACCGTGATTATGATTTTGCATATCCGGTCCAAGTTCACTGCTGTTGG
TAAGTGTCCTCACATTATGTCTCTATGTGTCGCGGTGCTGGAGTCAAGTG
GCCCCCCCGAGAACCGAACATCATTTACCAACATCATGTTATCACAGGTC
GCAAAGAAATTATTACGTTCTTTTACATTTATATGGCTCTGACCCTATGT
TCCCTGATCCTTGATGCAGGGGTTGTTCCACCTGGAAGTAGCCCATTTCC
ATACTTTGCAGCAGTGCAAAATGGGCTGGCGTCGGCGCTATGCACATCCC
TGCTCATCAACGGATTTGTTGGTTTCCAACTCTACGAAGACGGAACAATC
CTTTCAGTCTGGCTTCTTCGGCTTTCTTCCGCGGCGATGTTTGTCATCTC
TTTCCTTGTCTCTCTCGCGACCTTCAAGTCATGGGGAGGCCTGGGTCCCA
CTAACACAGTTGGCATGTTTGTCGTTCTGTATATCCTGAACGCCATCTGC
ATCGCCGTGTATCTGGTAATGTCACTGTTACTGGTAATGAACACCCTTGA
GGACCGCTGGCCTCTCGGTCACATCGCTTTTGGTCTTGTGGTCTTCATCT
GTGGTCAGGTGCTCCTTTACGCATTCAGTGACACCATCTGCGATAGCGTG
CAACATTACATGGACGGTCTTTTCTTCGCCACGTTCTGTAACCTCTTGGC
GGTCATGATGGTGTACAAGGTACGTATTTCCATCATTGTTCCAGAAGACT
AAAACCCTGCAAGGTTTCTGACACGCACCCCTGTCTAGTTCTGGGACTAC
ATTACGAAAGAAGATCTCGAGTTTTCCGTCGGGATCAAGCCCAACACTTG
GGAGGTCAAGGAACTCCTCCCGGATGAGGATCGCCGGCAGACAGGTTACT
ACGCTGATGCAAATTCGGAGTATGCCGGGAGCATGTATCATCATCGGACG
TCGACCTATCACGGCCATAACTAG
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Coding sequence (CDS) from alignment at An08:1057552..1058525+

>CBS51388_005288-T1 ID=CBS51388_005288-T1|Name=CBS51388_005288-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2421bp|location=Sequence derived from alignment at An08:1057552..1058525+ (Aspergillus niger CBS 513.88)
ATGACCGTGATTATGATTTTGCATATCCGGTCCAAGTTCACTGCTGTTGG
TCGCAAAGAAATTATTACGTTCTTTTACATTTATATGGCTCTGACCCTAT
GTTCCCTGATCCTTGATGCAGGGGTTGTTCCACCTGGAAGTAGCCCATTT
CCATACTTTGCAGCAGTGCAAAATGGGCTGGCGTCGGCGCTATGCACATC
CCTGCTCATCAACGGATTTGTTGGTTTCCAACTCTACGAAGACGGAACAA
TCCTTTCAGTCTGGCTTCTTCGGCTTTCTTCCGCGGCGATGTTTGTCATC
TCTTTCCTTGTCTCTCTCGCGACCTTCAAGTCATGGGGAGGCCTGGGTCC
CACTAACACAGTTGGCATGTTTGTCGTTCTGTATATCCTGAACGCCATCT
GCATCGCCGTGTATCTGGTAATGTCACTGTTACTGGTAATGAACACCCTT
GAGGACCGCTGGCCTCTCGGTCACATCGCTTTTGGTCTTGTGGTCTTCAT
CTGTGGTCAGGTGCTCCTTTACGCATTCAGTGACACCATCTGCGATAGCG
TGCAACATTACATGGACGGTCTTTTCTTCGCCACGTTCTGTAACCTCTTG
GCGGTCATGATGGTGTACAAGTTCTGGGACTACATTACGAAAGAAGATCT
CGAGTTTTCCGTCGGGATCAAGCCCAACACTTGGGAGGTCAAGGAACTCC
TCCCGGATGAGGATCGCCGGCAGACAGGTTACTACGCTGATGCAAATTCG
GAGTATGCCGGGAGCATGTATCATCATCGGACGTCGACCTATCACGGCCA
TAACTAGATGACCGTGATTATGATTTTGCATATCCGGTCCAAGTTCACTG
CTGTTGGTCGCAAAGAAATTATTACGTTCTTTTACATTTATATGGCTCTG
ACCCTATGTTCCCTGATCCTTGATGCAGGGGTTGTTCCACCTGGAAGTAG
CCCATTTCCATACTTTGCAGCAGTGCAAAATGGGCTGGCGTCGGCGCTAT
GCACATCCCTGCTCATCAACGGATTTGTTGGTTTCCAACTCTACGAAGAC
GGAACAATCCTTTCAGTCTGGCTTCTTCGGCTTTCTTCCGCGGCGATGTT
TGTCATCTCTTTCCTTGTCTCTCTCGCGACCTTCAAGTCATGGGGAGGCC
TGGGTCCCACTAACACAGTTGGCATGTTTGTCGTTCTGTATATCCTGAAC
GCCATCTGCATCGCCGTGTATCTGGTAATGTCACTGTTACTGGTAATGAA
CACCCTTGAGGACCGCTGGCCTCTCGGTCACATCGCTTTTGGTCTTGTGG
TCTTCATCTGTGGTCAGGTGCTCCTTTACGCATTCAGTGACACCATCTGC
GATAGCGTGCAACATTACATGGACGGTCTTTTCTTCGCCACGTTCTGTAA
CCTCTTGGCGGTCATGATGGTGTACAAGTTCTGGGACTACATTACGAAAG
AAGATCTCGAGTTTTCCGTCGGGATCAAGCCCAACACTTGGGAGGTCAAG
GAACTCCTCCCGGATGAGGATCGCCGGCAGACAGGTTACTACGCTGATGC
AAATTCGGAGTATGCCGGGAGCATGTATCATCATCGGACGTCGACCTATC
ACGGCCATAACTAGATGACCGTGATTATGATTTTGCATATCCGGTCCAAG
TTCACTGCTGTTGGTCGCAAAGAAATTATTACGTTCTTTTACATTTATAT
GGCTCTGACCCTATGTTCCCTGATCCTTGATGCAGGGGTTGTTCCACCTG
GAAGTAGCCCATTTCCATACTTTGCAGCAGTGCAAAATGGGCTGGCGTCG
GCGCTATGCACATCCCTGCTCATCAACGGATTTGTTGGTTTCCAACTCTA
CGAAGACGGAACAATCCTTTCAGTCTGGCTTCTTCGGCTTTCTTCCGCGG
CGATGTTTGTCATCTCTTTCCTTGTCTCTCTCGCGACCTTCAAGTCATGG
GGAGGCCTGGGTCCCACTAACACAGTTGGCATGTTTGTCGTTCTGTATAT
CCTGAACGCCATCTGCATCGCCGTGTATCTGGTAATGTCACTGTTACTGG
TAATGAACACCCTTGAGGACCGCTGGCCTCTCGGTCACATCGCTTTTGGT
CTTGTGGTCTTCATCTGTGGTCAGGTGCTCCTTTACGCATTCAGTGACAC
CATCTGCGATAGCGTGCAACATTACATGGACGGTCTTTTCTTCGCCACGT
TCTGTAACCTCTTGGCGGTCATGATGGTGTACAAGTTCTGGGACTACATT
ACGAAAGAAGATCTCGAGTTTTCCGTCGGGATCAAGCCCAACACTTGGGA
GGTCAAGGAACTCCTCCCGGATGAGGATCGCCGGCAGACAGGTTACTACG
CTGATGCAAATTCGGAGTATGCCGGGAGCATGTATCATCATCGGACGTCG
ACCTATCACGGCCATAACTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CHS7CBS51388_005288Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005288-T1.exon1CBS51388_005288-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_005288-T1.exon2CBS51388_005288-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_005288-T1.exon3CBS51388_005288-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005288-T1.cdsCBS51388_005288-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005288-T1CBS51388_005288-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR022057
DBxrefPFAM:PF12271
Product class 7
ProductChitin synthase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:1057552..1058525 +
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