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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:1062751..1063866- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005290-T1 ID=CBS51388_005290-T1|Name=CBS51388_005290-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1116bp|location=Sequence derived from alignment at An08:1062751..1063866- (Aspergillus niger CBS 513.88)
ATGCATGACCCAACATCCAACGCAAGCCCATCCTCCTGGGCAGAGCTCAT
GGCTCTCCGCCGCCTACCCAACCCACCCAGCAGCAGTACCACCGAGCCAA
CCGAGCGATTCGAATCCATAGCACCACCCTACCCACCGGGCAAGGAACTC
GCGCCTTTGGCGGACATGTCTACGCCCAATCCGCATACGCAGCCTCTCAA
ACCGTAGAGAAGGGGTTCGTGATCCACGTAAGTACCCCCCCTTCCTCACA
CGCAGAAAGAGAGCACAGACTAACGCCAACACCACCAGAGCGTAAGCGGA
ACATTCATCCTAGGAGGCCTCCTAGACGTTCCATACGAGTACACAGTGCG
CCATCTGCGCGACGGAAAGATGTACTGCACGAGGTCCGTGGACGTGCGAC
AAGCGAACCAGATCTGTTTCTCGTGCTTATGTTCCTTCAAGCGGGGGGAG
AAGCAGAGCGGGTTTGCGCATCAGCCTGCACCTGTGCAGGAGCGATATGC
GTCCATTATCTCTGGAAAGAGGGCGGAGGATTACCCCGTTAGTCCGAGCG
TGGATGCAGATTGGTGGATTGAGGGGGTTAAGGCTGGCGATTTGACGGAA
AGGGAGTTCCCTGGGGTGGATGTGCGAAAGGTTGATATGGGGACGTTCAA
TCAAGGGGAGGATGTGAAGAGTCATCCGGAGAGGTATCGGCAGTTGGCGA
TGTATTCGATCAAGGGACTTCCGGTACTTGGGGAGGAGGAAAGGAGGGTG
AGGGAGAGGGAGGAGGCGGGGGAGTTTGATAATTTGTATGCATGTGCGCA
TATGTATGCTTGTGATAGGAACTCGTTGTTGTTGATTCCAAGGGCGTTGG
GGGAGACAACGTGGTCGTCTATGGCGAGTTTGATGCTTACGGTTGTGTTT
CATGAGTTGGGAGAGGCATTGCGGATGCTTGATTGGGGTTCTGAGGGAAA
TGAGGGCGTGGGGAAGAAGTGGTTCATACAGGAGGGGTGGACTCCTAGGT
CTGCGGAGAATCGGGCAGTTCATGAGAGTTGGTTGTGGACTCCGGATGGG
AAGTTGTTGGCTACGAGTTATCAGGATAGTTTGTTGCGGTTGACGAGTTC
ACGGGGGAAGCTTTAA back to topCoding sequence (CDS) from alignment at An08:1062751..1063866- >CBS51388_005290-T1 ID=CBS51388_005290-T1|Name=CBS51388_005290-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2988bp|location=Sequence derived from alignment at An08:1062751..1063866- (Aspergillus niger CBS 513.88)
AGCGTAAGCGGAACATTCATCCTAGGAGGCCTCCTAGACGTTCCATACGA
GTACACAGTGCGCCATCTGCGCGACGGAAAGATGTACTGCACGAGGTCCG
TGGACGTGCGACAAGCGAACCAGATCTGTTTCTCGTGCTTATGTTCCTTC
AAGCGGGGGGAGAAGCAGAGCGGGTTTGCGCATCAGCCTGCACCTGTGCA
GGAGCGATATGCGTCCATTATCTCTGGAAAGAGGGCGGAGGATTACCCCG
TTAGTCCGAGCGTGGATGCAGATTGGTGGATTGAGGGGGTTAAGGCTGGC
GATTTGACGGAAAGGGAGTTCCCTGGGGTGGATGTGCGAAAGGTTGATAT
GGGGACGTTCAATCAAGGGGAGGATGTGAAGAGTCATCCGGAGAGGTATC
GGCAGTTGGCGATGTATTCGATCAAGGGACTTCCGGTACTTGGGGAGGAG
GAAAGGAGGGTGAGGGAGAGGGAGGAGGCGGGGGAGTTTGATAATTTGTA
TGCATGTGCGCATATGTATGCTTGTGATAGGAACTCGTTGTTGTTGATTC
CAAGGGCGTTGGGGGAGACAACGTGGTCGTCTATGGCGAGTTTGATGCTT
ACGGTTGTGTTTCATGAGTTGGGAGAGGCATTGCGGATGCTTGATTGGGG
TTCTGAGGGAAATGAGGGCGTGGGGAAGAAGTGGTTCATACAGGAGGGGT
GGACTCCTAGGTCTGCGGAGAATCGGGCAGTTCATGAGAGTTGGTTGTGG
ACTCCGGATGGGAAGTTGTTGGCTACGAGTTATCAGGATAGTTTGTTGCG
GTTGACGAGTTCACGGGGGAAGCTTTAAGAACTCGCGCCTTTGGCGGACA
TGTCTACGCCCAATCCGCATACGCAGCCTCTCAAACCGTAGAGAAGGGGT
TCGTGATCCACATGCATGACCCAACATCCAACGCAAGCCCATCCTCCTGG
GCAGAGCTCATGGCTCTCCGCCGCCTACCCAACCCACCCAGCAGCAAGCG
TAAGCGGAACATTCATCCTAGGAGGCCTCCTAGACGTTCCATACGAGTAC
ACAGTGCGCCATCTGCGCGACGGAAAGATGTACTGCACGAGGTCCGTGGA
CGTGCGACAAGCGAACCAGATCTGTTTCTCGTGCTTATGTTCCTTCAAGC
GGGGGGAGAAGCAGAGCGGGTTTGCGCATCAGCCTGCACCTGTGCAGGAG
CGATATGCGTCCATTATCTCTGGAAAGAGGGCGGAGGATTACCCCGTTAG
TCCGAGCGTGGATGCAGATTGGTGGATTGAGGGGGTTAAGGCTGGCGATT
TGACGGAAAGGGAGTTCCCTGGGGTGGATGTGCGAAAGGTTGATATGGGG
ACGTTCAATCAAGGGGAGGATGTGAAGAGTCATCCGGAGAGGTATCGGCA
GTTGGCGATGTATTCGATCAAGGGACTTCCGGTACTTGGGGAGGAGGAAA
GGAGGGTGAGGGAGAGGGAGGAGGCGGGGGAGTTTGATAATTTGTATGCA
TGTGCGCATATGTATGCTTGTGATAGGAACTCGTTGTTGTTGATTCCAAG
GGCGTTGGGGGAGACAACGTGGTCGTCTATGGCGAGTTTGATGCTTACGG
TTGTGTTTCATGAGTTGGGAGAGGCATTGCGGATGCTTGATTGGGGTTCT
GAGGGAAATGAGGGCGTGGGGAAGAAGTGGTTCATACAGGAGGGGTGGAC
TCCTAGGTCTGCGGAGAATCGGGCAGTTCATGAGAGTTGGTTGTGGACTC
CGGATGGGAAGTTGTTGGCTACGAGTTATCAGGATAGTTTGTTGCGGTTG
ACGAGTTCACGGGGGAAGCTTTAAGAACTCGCGCCTTTGGCGGACATGTC
TACGCCCAATCCGCATACGCAGCCTCTCAAACCGTAGAGAAGGGGTTCGT
GATCCACATGCATGACCCAACATCCAACGCAAGCCCATCCTCCTGGGCAG
AGCTCATGGCTCTCCGCCGCCTACCCAACCCACCCAGCAGCAAGCGTAAG
CGGAACATTCATCCTAGGAGGCCTCCTAGACGTTCCATACGAGTACACAG
TGCGCCATCTGCGCGACGGAAAGATGTACTGCACGAGGTCCGTGGACGTG
CGACAAGCGAACCAGATCTGTTTCTCGTGCTTATGTTCCTTCAAGCGGGG
GGAGAAGCAGAGCGGGTTTGCGCATCAGCCTGCACCTGTGCAGGAGCGAT
ATGCGTCCATTATCTCTGGAAAGAGGGCGGAGGATTACCCCGTTAGTCCG
AGCGTGGATGCAGATTGGTGGATTGAGGGGGTTAAGGCTGGCGATTTGAC
GGAAAGGGAGTTCCCTGGGGTGGATGTGCGAAAGGTTGATATGGGGACGT
TCAATCAAGGGGAGGATGTGAAGAGTCATCCGGAGAGGTATCGGCAGTTG
GCGATGTATTCGATCAAGGGACTTCCGGTACTTGGGGAGGAGGAAAGGAG
GGTGAGGGAGAGGGAGGAGGCGGGGGAGTTTGATAATTTGTATGCATGTG
CGCATATGTATGCTTGTGATAGGAACTCGTTGTTGTTGATTCCAAGGGCG
TTGGGGGAGACAACGTGGTCGTCTATGGCGAGTTTGATGCTTACGGTTGT
GTTTCATGAGTTGGGAGAGGCATTGCGGATGCTTGATTGGGGTTCTGAGG
GAAATGAGGGCGTGGGGAAGAAGTGGTTCATACAGGAGGGGTGGACTCCT
AGGTCTGCGGAGAATCGGGCAGTTCATGAGAGTTGGTTGTGGACTCCGGA
TGGGAAGTTGTTGGCTACGAGTTATCAGGATAGTTTGTTGCGGTTGACGA
GTTCACGGGGGAAGCTTTAAGAACTCGCGCCTTTGGCGGACATGTCTACG
CCCAATCCGCATACGCAGCCTCTCAAACCGTAGAGAAGGGGTTCGTGATC
CACATGCATGACCCAACATCCAACGCAAGCCCATCCTCCTGGGCAGAGCT
CATGGCTCTCCGCCGCCTACCCAACCCACCCAGCAGCA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029069 |
| DBxref | InterPro:IPR042171 |
| DBxref | PFAM:PF13622 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:1062751..1063866 - |
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