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CBS51388_005320-T1, CBS51388_005320-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005320-T1
Unique NameCBS51388_005320-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:1135575..1136724-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005320-T1 ID=CBS51388_005320-T1|Name=CBS51388_005320-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1150bp|location=Sequence derived from alignment at An08:1135575..1136724- (Aspergillus niger CBS 513.88)
ATGGCACCCGCCCTCGGCCAAATCTTCCCCCCAAATCCTACCTTTGTCGA
GAAAGACATGCCCGACTTGACAGGAAAGGTAACCATTGTCACTGGTGCAA
CGTCCGGAGTCGGTTTCAACACAGCATCCATCCTATACTCCAAAAATGCC
ACCGTATACATCGCAGCCCGGTCCGCCGACAAGGCCCGCACGGCCATCAA
CGAGATTCAGACCTCCGCGGAGGGCGCACATAGCCGAGGTCGCCTCTCCT
TCCTGCAACTAGATTTGTCCAACCTAGCCAGCATCAAAGAAAGCGCCAAT
AAATTTCTGGAGTTGGAAGACCGTCTTGATATATTGATTCATAATGCGGG
AGTCATGACTCCTCCGGCGGGGAGTAAGACGATAACTGTATTACTCCCGA
CAATAGCTAGTGATAAATGGAACACAAACGCTGATATTCGAGATAGGGGC
ACGATCTTGAAATGGGAACAAACTGCCTCGGGCCCTTCCTCTTCAACAAA
TTCCTTCTTCCGCTTATTCAACGCACCGCGGCCGCAGCTCCCGCGAGTAG
CGTGCGCGTGGTGTGGTTGTCGTCCATGATATCATCGTTCACTGCGAATG
GGGGGATCATCTTCGATGAAGAGACTGGTGCTCCTAAGGTCCTCTCTGAC
CCGATGCAGAATTATATGGAGAGTAAAGTGGGCAATGTGTTCATCGCTAA
GGAGATGGCGAATCGGGATGGTGGGGAAGGCATACTTAGTTTGGTTCGTT
TGATCCTCAAATATCATTTTAGAGTGGATGAGTCAAACTAACTGGTAACA
GAGTGTACATCCTGGCCTTATGAAGACTGAGCTACAGAGACATAGTTCTG
CCATTCAGGCTACGGTTATGGTATGCTTTCCCTTTCCAACGAGCAATGGA
ACTCCTAGCTGACGATAGGCAGGGCTGGATATTCAAGGGTCCGCGGTACG
GAGCGTACAGTGAGCTCTTTGCAGCGCTGTCTCCGGAAGTGACGCAAGAG
AAGAACGGAGCGTATATAATTCCCTGGGGGAGGTTCGGGCCTATCCCTTG
TCATCTTCAGAAGGGGTTGGTGTCGAAGCGTGATGGAGGGGCGGGAACGG
CGGAGAGGTTCTGGGGGTGGTGTGAGAAGGAAACTGCTCCGTATCTCTGA
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Coding sequence (CDS) from alignment at An08:1135575..1136724-

>CBS51388_005320-T1 ID=CBS51388_005320-T1|Name=CBS51388_005320-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3924bp|location=Sequence derived from alignment at An08:1135575..1136724- (Aspergillus niger CBS 513.88)
GGCTGGATATTCAAGGGTCCGCGGTACGGAGCGTACAGTGAGCTCTTTGC
AGCGCTGTCTCCGGAAGTGACGCAAGAGAAGAACGGAGCGTATATAATTC
CCTGGGGGAGGTTCGGGCCTATCCCTTGTCATCTTCAGAAGGGGTTGGTG
TCGAAGCGTGATGGAGGGGCGGGAACGGCGGAGAGGTTCTGGGGGTGGTG
TGAGAAGGAAACTGCTCCGTATCTCTGAAGTGTACATCCTGGCCTTATGA
AGACTGAGCTACAGAGACATAGTTCTGCCATTCAGGCTACGGTTATGGGG
CACGATCTTGAAATGGGAACAAACTGCCTCGGGCCCTTCCTCTTCAACAA
ATTCCTTCTTCCGCTTATTCAACGCACCGCGGCCGCAGCTCCCGCGAGTA
GCGTGCGCGTGGTGTGGTTGTCGTCCATGATATCATCGTTCACTGCGAAT
GGGGGGATCATCTTCGATGAAGAGACTGGTGCTCCTAAGGTCCTCTCTGA
CCCGATGCAGAATTATATGGAGAGTAAAGTGGGCAATGTGTTCATCGCTA
AGGAGATGGCGAATCGGGATGGTGGGGAAGGCATACTTAGTTTGATGGCA
CCCGCCCTCGGCCAAATCTTCCCCCCAAATCCTACCTTTGTCGAGAAAGA
CATGCCCGACTTGACAGGAAAGGTAACCATTGTCACTGGTGCAACGTCCG
GAGTCGGTTTCAACACAGCATCCATCCTATACTCCAAAAATGCCACCGTA
TACATCGCAGCCCGGTCCGCCGACAAGGCCCGCACGGCCATCAACGAGAT
TCAGACCTCCGCGGAGGGCGCACATAGCCGAGGTCGCCTCTCCTTCCTGC
AACTAGATTTGTCCAACCTAGCCAGCATCAAAGAAAGCGCCAATAAATTT
CTGGAGTTGGAAGACCGTCTTGATATATTGATTCATAATGCGGGAGTCAT
GACTCCTCCGGCGGGGAGTAAGACGATAACTGGCTGGATATTCAAGGGTC
CGCGGTACGGAGCGTACAGTGAGCTCTTTGCAGCGCTGTCTCCGGAAGTG
ACGCAAGAGAAGAACGGAGCGTATATAATTCCCTGGGGGAGGTTCGGGCC
TATCCCTTGTCATCTTCAGAAGGGGTTGGTGTCGAAGCGTGATGGAGGGG
CGGGAACGGCGGAGAGGTTCTGGGGGTGGTGTGAGAAGGAAACTGCTCCG
TATCTCTGAAGTGTACATCCTGGCCTTATGAAGACTGAGCTACAGAGACA
TAGTTCTGCCATTCAGGCTACGGTTATGGGGCACGATCTTGAAATGGGAA
CAAACTGCCTCGGGCCCTTCCTCTTCAACAAATTCCTTCTTCCGCTTATT
CAACGCACCGCGGCCGCAGCTCCCGCGAGTAGCGTGCGCGTGGTGTGGTT
GTCGTCCATGATATCATCGTTCACTGCGAATGGGGGGATCATCTTCGATG
AAGAGACTGGTGCTCCTAAGGTCCTCTCTGACCCGATGCAGAATTATATG
GAGAGTAAAGTGGGCAATGTGTTCATCGCTAAGGAGATGGCGAATCGGGA
TGGTGGGGAAGGCATACTTAGTTTGATGGCACCCGCCCTCGGCCAAATCT
TCCCCCCAAATCCTACCTTTGTCGAGAAAGACATGCCCGACTTGACAGGA
AAGGTAACCATTGTCACTGGTGCAACGTCCGGAGTCGGTTTCAACACAGC
ATCCATCCTATACTCCAAAAATGCCACCGTATACATCGCAGCCCGGTCCG
CCGACAAGGCCCGCACGGCCATCAACGAGATTCAGACCTCCGCGGAGGGC
GCACATAGCCGAGGTCGCCTCTCCTTCCTGCAACTAGATTTGTCCAACCT
AGCCAGCATCAAAGAAAGCGCCAATAAATTTCTGGAGTTGGAAGACCGTC
TTGATATATTGATTCATAATGCGGGAGTCATGACTCCTCCGGCGGGGAGT
AAGACGATAACTGGCTGGATATTCAAGGGTCCGCGGTACGGAGCGTACAG
TGAGCTCTTTGCAGCGCTGTCTCCGGAAGTGACGCAAGAGAAGAACGGAG
CGTATATAATTCCCTGGGGGAGGTTCGGGCCTATCCCTTGTCATCTTCAG
AAGGGGTTGGTGTCGAAGCGTGATGGAGGGGCGGGAACGGCGGAGAGGTT
CTGGGGGTGGTGTGAGAAGGAAACTGCTCCGTATCTCTGAAGTGTACATC
CTGGCCTTATGAAGACTGAGCTACAGAGACATAGTTCTGCCATTCAGGCT
ACGGTTATGGGGCACGATCTTGAAATGGGAACAAACTGCCTCGGGCCCTT
CCTCTTCAACAAATTCCTTCTTCCGCTTATTCAACGCACCGCGGCCGCAG
CTCCCGCGAGTAGCGTGCGCGTGGTGTGGTTGTCGTCCATGATATCATCG
TTCACTGCGAATGGGGGGATCATCTTCGATGAAGAGACTGGTGCTCCTAA
GGTCCTCTCTGACCCGATGCAGAATTATATGGAGAGTAAAGTGGGCAATG
TGTTCATCGCTAAGGAGATGGCGAATCGGGATGGTGGGGAAGGCATACTT
AGTTTGATGGCACCCGCCCTCGGCCAAATCTTCCCCCCAAATCCTACCTT
TGTCGAGAAAGACATGCCCGACTTGACAGGAAAGGTAACCATTGTCACTG
GTGCAACGTCCGGAGTCGGTTTCAACACAGCATCCATCCTATACTCCAAA
AATGCCACCGTATACATCGCAGCCCGGTCCGCCGACAAGGCCCGCACGGC
CATCAACGAGATTCAGACCTCCGCGGAGGGCGCACATAGCCGAGGTCGCC
TCTCCTTCCTGCAACTAGATTTGTCCAACCTAGCCAGCATCAAAGAAAGC
GCCAATAAATTTCTGGAGTTGGAAGACCGTCTTGATATATTGATTCATAA
TGCGGGAGTCATGACTCCTCCGGCGGGGAGTAAGACGATAACTGGCTGGA
TATTCAAGGGTCCGCGGTACGGAGCGTACAGTGAGCTCTTTGCAGCGCTG
TCTCCGGAAGTGACGCAAGAGAAGAACGGAGCGTATATAATTCCCTGGGG
GAGGTTCGGGCCTATCCCTTGTCATCTTCAGAAGGGGTTGGTGTCGAAGC
GTGATGGAGGGGCGGGAACGGCGGAGAGGTTCTGGGGGTGGTGTGAGAAG
GAAACTGCTCCGTATCTCTGAAGTGTACATCCTGGCCTTATGAAGACTGA
GCTACAGAGACATAGTTCTGCCATTCAGGCTACGGTTATGGGGCACGATC
TTGAAATGGGAACAAACTGCCTCGGGCCCTTCCTCTTCAACAAATTCCTT
CTTCCGCTTATTCAACGCACCGCGGCCGCAGCTCCCGCGAGTAGCGTGCG
CGTGGTGTGGTTGTCGTCCATGATATCATCGTTCACTGCGAATGGGGGGA
TCATCTTCGATGAAGAGACTGGTGCTCCTAAGGTCCTCTCTGACCCGATG
CAGAATTATATGGAGAGTAAAGTGGGCAATGTGTTCATCGCTAAGGAGAT
GGCGAATCGGGATGGTGGGGAAGGCATACTTAGTTTGATGGCACCCGCCC
TCGGCCAAATCTTCCCCCCAAATCCTACCTTTGTCGAGAAAGACATGCCC
GACTTGACAGGAAAGGTAACCATTGTCACTGGTGCAACGTCCGGAGTCGG
TTTCAACACAGCATCCATCCTATACTCCAAAAATGCCACCGTATACATCG
CAGCCCGGTCCGCCGACAAGGCCCGCACGGCCATCAACGAGATTCAGACC
TCCGCGGAGGGCGCACATAGCCGAGGTCGCCTCTCCTTCCTGCAACTAGA
TTTGTCCAACCTAGCCAGCATCAAAGAAAGCGCCAATAAATTTCTGGAGT
TGGAAGACCGTCTTGATATATTGATTCATAATGCGGGAGTCATGACTCCT
CCGGCGGGGAGTAAGACGATAACT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005320CBS51388_005320Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005320-T1CBS51388_005320-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005320-T1.cdsCBS51388_005320-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005320-T1.exon4CBS51388_005320-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_005320-T1.exon3CBS51388_005320-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_005320-T1.exon2CBS51388_005320-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_005320-T1.exon1CBS51388_005320-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:1135575..1136724 -
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