CBS51388_005324-T1, CBS51388_005324-T1 (mRNA) Aspergillus niger CBS 513.88

Overview


Name	CBS51388_005324-T1
Unique Name	CBS51388_005324-T1
Type	mRNA
Organism	Aspergillus niger CBS 513.88

Sequences

The following sequences are available for this feature:

mRNA from alignment at An08:1144984..1147084+
coding sequence from alignment at An08:1144984..1147084+

mRNA from alignment at An08:1144984..1147084+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>CBS51388_005324-T1 ID=CBS51388_005324-T1|Name=CBS51388_005324-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2101bp|location=Sequence derived from alignment at An08:1144984..1147084+ (Aspergillus niger CBS 513.88)
ATGGCCCGAGGCGCTCGCTCAAGTCATGCTACAAGGGCCTCTAGGCCCTC
GGCTGCTGCGTGCGAAGTATGCCGCCACCTAAAGATGCGTTGTATCCGGC
CCGACCCATCGCAGCCATGCGACCGCTGTCGACGCAACAATCGGCGCTGC
GACATCCCCCCTCCCCGTCCTTTGGGCCGCCGGCCCGGTGCTGTTGGTCG
CTATAATGGATTCGAAAAGTCCTATAGGAAAATGCAAGCACAGCTGAAGA
AAGCACCTGTGTCGGCTGATGAGGTACAGCAGGTGCTGAATACCACGGGC
CAGGAGGAATTGCTCCAATTGATTGTGGCGAAGCTGCAGCATGGTAGTAA
CTGCGAGACGCCAGTTGCATCCACAGAGGATGCACTGAGAAGCAACCACG
ATGGCTTGCTAACCCCGAAGGAACCAGTTAGCAATCCGCTCGCACTGCTG
GCGGACGCATCTAGCGTAGCAGAGCCATTGACTTCCTCACTAAATCGACC
ATCCACTACAAATGGTGGCCAGGAGCTGCTCCAGCGCTTGGGCTGTGTGT
CATTGGGACTACAGCTAAGTCGAGACACATTGGCACAAGGCCTCAATGCT
CTTTATACCCCCTCTCCGCCAATTCACTGCCATTCAAGCTATTTCCGACC
TCCTGATGCGGATCCACCTCGAGATGTTGGCCCAGACCTGGATCCTATTG
AGCTGGGGCTATTATCGCTTGAGGATGCGCATACTTTGTTTTCAATGTAT
GTGCAATACGCCCCGGGAATTCTCTTGCTAACGGAGTACTAGCTATTTCG
TCCGTTTACACCCCATCAACGGCATCTTAGACCCAATTCTCCACACCGTC
GACTATGTGCGCTCCCGCTCCGCTCTCCTCTTCACATGGATCCTGGCCAT
TACAGCTCAATTCGATCACCAGTCTGCATCGTGCGCCAAACGCCTGCGCC
TCCACGGCGAGATGCTCTCGCGCCATGTCCACACATCCGGGTACAAGTCC
GTTGAAATTGTCCAAGGATACTACATTTCTCTTCTTTCCGCTACCCCTGC
CTCTGCCTTGTCCGAGGAACGCTCATGGCTTTACACTTCCTACGCTGTCG
CCGTCGCCACTGAGCTCGGCTTAGACCAAGCTAACCCTTCCAATATTCTT
CCCTCCGACTCGGTGATGTCCCAGCGACAAGCTCGCAATAGCGAACGAAC
CTGGCTGCGAATCCTGCTGTGGGAACGCGCTACCAGCGCCGCTTATGGGC
GCGCAACTGCCTTTCCCGAGTCGCCATTGACCCGGAATATTGACAAATGG
TGGCATCATCCCCTCGCCGATTCGACGGACAAGGACACATGTGCCTTTAT
TCTCCTCCGTCGGTATCTGGCAGGCCTCCATCGCACCTTGCACCACCAAG
CCTCTTTGTCTCACGATAACCCCCACTGGGTTCGCAATCTTGTCGACTCC
ACCCTCGATCCCTGGCGAATCACCTGGCTTCCTGGCTGCACGACTAGAGC
CATTACCCCCTCCCCCAACATATCCACGGCCTTTCTGACCTACGTTTATC
TCCACAACCGTCTCTGGACGCTCTCTTTCGCCCTACATACCCAGACCATT
CATTCCCACGCCCTTCAGGAAGACTGCTTTATGGCCGCCGTGCAATGCTG
TACCCTCGCCGTGCACGATCTCCAATCAATTGGTGAACCTCTGTATTGTC
TACTCTCCCCAACCTGGGCTATGATAGCCTACGCCGCCACTCTGGCCCTC
AGACTGTTCCCCGCTCTGTGTGGAACCCATCCCGGTGACGAGACCGAGTT
GCTGGCACTACTAGGACAAGTAGCCCTGCAGCTGGAGAAGGCAGGGAGCA
CACCGTCTCATCGAACTGGGATTGCAGCTGTGCTGGGGAGGCATTTGCTT
AGTATCCTGCGGGCGAGAGTTGGGACGGGGATCGGACCTGGGGTTGTTGC
GGATAGCGGGCTGCACTGTTCATCTGAATCGGGGCTGGTGGGGAGCAGCT
GCGATCCAGTCCTGGGGTCTGTTGCGATGGGCTTGGATGAAGGGTTTGCG
GATGTGTTCCGGGAGGTGTTCGGGCCGGGGTGGGGGTTGGACATGGAATG
A

Coding sequence (CDS) from alignment at An08:1144984..1147084+

>CBS51388_005324-T1 ID=CBS51388_005324-T1|Name=CBS51388_005324-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4110bp|location=Sequence derived from alignment at An08:1144984..1147084+ (Aspergillus niger CBS 513.88)
ATGGCCCGAGGCGCTCGCTCAAGTCATGCTACAAGGGCCTCTAGGCCCTC
GGCTGCTGCGTGCGAAGTATGCCGCCACCTAAAGATGCGTTGTATCCGGC
CCGACCCATCGCAGCCATGCGACCGCTGTCGACGCAACAATCGGCGCTGC
GACATCCCCCCTCCCCGTCCTTTGGGCCGCCGGCCCGGTGCTGTTGGTCG
CTATAATGGATTCGAAAAGTCCTATAGGAAAATGCAAGCACAGCTGAAGA
AAGCACCTGTGTCGGCTGATGAGGTACAGCAGGTGCTGAATACCACGGGC
CAGGAGGAATTGCTCCAATTGATTGTGGCGAAGCTGCAGCATGGTAGTAA
CTGCGAGACGCCAGTTGCATCCACAGAGGATGCACTGAGAAGCAACCACG
ATGGCTTGCTAACCCCGAAGGAACCAGTTAGCAATCCGCTCGCACTGCTG
GCGGACGCATCTAGCGTAGCAGAGCCATTGACTTCCTCACTAAATCGACC
ATCCACTACAAATGGTGGCCAGGAGCTGCTCCAGCGCTTGGGCTGTGTGT
CATTGGGACTACAGCTAAGTCGAGACACATTGGCACAAGGCCTCAATGCT
CTTTATACCCCCTCTCCGCCAATTCACTGCCATTCAAGCTATTTCCGACC
TCCTGATGCGGATCCACCTCGAGATGTTGGCCCAGACCTGGATCCTATTG
AGCTGGGGCTATTATCGCTTGAGGATGCGCATACTTTGTTTTCAATCTAT
TTCGTCCGTTTACACCCCATCAACGGCATCTTAGACCCAATTCTCCACAC
CGTCGACTATGTGCGCTCCCGCTCCGCTCTCCTCTTCACATGGATCCTGG
CCATTACAGCTCAATTCGATCACCAGTCTGCATCGTGCGCCAAACGCCTG
CGCCTCCACGGCGAGATGCTCTCGCGCCATGTCCACACATCCGGGTACAA
GTCCGTTGAAATTGTCCAAGGATACTACATTTCTCTTCTTTCCGCTACCC
CTGCCTCTGCCTTGTCCGAGGAACGCTCATGGCTTTACACTTCCTACGCT
GTCGCCGTCGCCACTGAGCTCGGCTTAGACCAAGCTAACCCTTCCAATAT
TCTTCCCTCCGACTCGGTGATGTCCCAGCGACAAGCTCGCAATAGCGAAC
GAACCTGGCTGCGAATCCTGCTGTGGGAACGCGCTACCAGCGCCGCTTAT
GGGCGCGCAACTGCCTTTCCCGAGTCGCCATTGACCCGGAATATTGACAA
ATGGTGGCATCATCCCCTCGCCGATTCGACGGACAAGGACACATGTGCCT
TTATTCTCCTCCGTCGGTATCTGGCAGGCCTCCATCGCACCTTGCACCAC
CAAGCCTCTTTGTCTCACGATAACCCCCACTGGGTTCGCAATCTTGTCGA
CTCCACCCTCGATCCCTGGCGAATCACCTGGCTTCCTGGCTGCACGACTA
GAGCCATTACCCCCTCCCCCAACATATCCACGGCCTTTCTGACCTACGTT
TATCTCCACAACCGTCTCTGGACGCTCTCTTTCGCCCTACATACCCAGAC
CATTCATTCCCACGCCCTTCAGGAAGACTGCTTTATGGCCGCCGTGCAAT
GCTGTACCCTCGCCGTGCACGATCTCCAATCAATTGGTGAACCTCTGTAT
TGTCTACTCTCCCCAACCTGGGCTATGATAGCCTACGCCGCCACTCTGGC
CCTCAGACTGTTCCCCGCTCTGTGTGGAACCCATCCCGGTGACGAGACCG
AGTTGCTGGCACTACTAGGACAAGTAGCCCTGCAGCTGGAGAAGGCAGGG
AGCACACCGTCTCATCGAACTGGGATTGCAGCTGTGCTGGGGAGGCATTT
GCTTAGTATCCTGCGGGCGAGAGTTGGGACGGGGATCGGACCTGGGGTTG
TTGCGGATAGCGGGCTGCACTGTTCATCTGAATCGGGGCTGGTGGGGAGC
AGCTGCGATCCAGTCCTGGGGTCTGTTGCGATGGGCTTGGATGAAGGGTT
TGCGGATGTGTTCCGGGAGGTGTTCGGGCCGGGGTGGGGGTTGGACATGG
AATGAATGGCCCGAGGCGCTCGCTCAAGTCATGCTACAAGGGCCTCTAGG
CCCTCGGCTGCTGCGTGCGAAGTATGCCGCCACCTAAAGATGCGTTGTAT
CCGGCCCGACCCATCGCAGCCATGCGACCGCTGTCGACGCAACAATCGGC
GCTGCGACATCCCCCCTCCCCGTCCTTTGGGCCGCCGGCCCGGTGCTGTT
GGTCGCTATAATGGATTCGAAAAGTCCTATAGGAAAATGCAAGCACAGCT
GAAGAAAGCACCTGTGTCGGCTGATGAGGTACAGCAGGTGCTGAATACCA
CGGGCCAGGAGGAATTGCTCCAATTGATTGTGGCGAAGCTGCAGCATGGT
AGTAACTGCGAGACGCCAGTTGCATCCACAGAGGATGCACTGAGAAGCAA
CCACGATGGCTTGCTAACCCCGAAGGAACCAGTTAGCAATCCGCTCGCAC
TGCTGGCGGACGCATCTAGCGTAGCAGAGCCATTGACTTCCTCACTAAAT
CGACCATCCACTACAAATGGTGGCCAGGAGCTGCTCCAGCGCTTGGGCTG
TGTGTCATTGGGACTACAGCTAAGTCGAGACACATTGGCACAAGGCCTCA
ATGCTCTTTATACCCCCTCTCCGCCAATTCACTGCCATTCAAGCTATTTC
CGACCTCCTGATGCGGATCCACCTCGAGATGTTGGCCCAGACCTGGATCC
TATTGAGCTGGGGCTATTATCGCTTGAGGATGCGCATACTTTGTTTTCAA
TCTATTTCGTCCGTTTACACCCCATCAACGGCATCTTAGACCCAATTCTC
CACACCGTCGACTATGTGCGCTCCCGCTCCGCTCTCCTCTTCACATGGAT
CCTGGCCATTACAGCTCAATTCGATCACCAGTCTGCATCGTGCGCCAAAC
GCCTGCGCCTCCACGGCGAGATGCTCTCGCGCCATGTCCACACATCCGGG
TACAAGTCCGTTGAAATTGTCCAAGGATACTACATTTCTCTTCTTTCCGC
TACCCCTGCCTCTGCCTTGTCCGAGGAACGCTCATGGCTTTACACTTCCT
ACGCTGTCGCCGTCGCCACTGAGCTCGGCTTAGACCAAGCTAACCCTTCC
AATATTCTTCCCTCCGACTCGGTGATGTCCCAGCGACAAGCTCGCAATAG
CGAACGAACCTGGCTGCGAATCCTGCTGTGGGAACGCGCTACCAGCGCCG
CTTATGGGCGCGCAACTGCCTTTCCCGAGTCGCCATTGACCCGGAATATT
GACAAATGGTGGCATCATCCCCTCGCCGATTCGACGGACAAGGACACATG
TGCCTTTATTCTCCTCCGTCGGTATCTGGCAGGCCTCCATCGCACCTTGC
ACCACCAAGCCTCTTTGTCTCACGATAACCCCCACTGGGTTCGCAATCTT
GTCGACTCCACCCTCGATCCCTGGCGAATCACCTGGCTTCCTGGCTGCAC
GACTAGAGCCATTACCCCCTCCCCCAACATATCCACGGCCTTTCTGACCT
ACGTTTATCTCCACAACCGTCTCTGGACGCTCTCTTTCGCCCTACATACC
CAGACCATTCATTCCCACGCCCTTCAGGAAGACTGCTTTATGGCCGCCGT
GCAATGCTGTACCCTCGCCGTGCACGATCTCCAATCAATTGGTGAACCTC
TGTATTGTCTACTCTCCCCAACCTGGGCTATGATAGCCTACGCCGCCACT
CTGGCCCTCAGACTGTTCCCCGCTCTGTGTGGAACCCATCCCGGTGACGA
GACCGAGTTGCTGGCACTACTAGGACAAGTAGCCCTGCAGCTGGAGAAGG
CAGGGAGCACACCGTCTCATCGAACTGGGATTGCAGCTGTGCTGGGGAGG
CATTTGCTTAGTATCCTGCGGGCGAGAGTTGGGACGGGGATCGGACCTGG
GGTTGTTGCGGATAGCGGGCTGCACTGTTCATCTGAATCGGGGCTGGTGG
GGAGCAGCTGCGATCCAGTCCTGGGGTCTGTTGCGATGGGCTTGGATGAA
GGGTTTGCGGATGTGTTCCGGGAGGTGTTCGGGCCGGGGTGGGGGTTGGA
CATGGAATGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0042025	host cell nucleus

Vocabulary: **Molecular Function**
Term	Definition
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270	zinc ion binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
CBS51388_005324	CBS51388_005324	Aspergillus niger CBS 513.88	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_005324-T1.exon1	CBS51388_005324-T1.exon1	Aspergillus niger CBS 513.88	exon
CBS51388_005324-T1.exon2	CBS51388_005324-T1.exon2	Aspergillus niger CBS 513.88	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_005324-T1.cds	CBS51388_005324-T1.cds	Aspergillus niger CBS 513.88	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_005324-T1	CBS51388_005324-T1-protein	Aspergillus niger CBS 513.88	polypeptide

Properties


Property Name	Value
Note	antiSMASH:Cluster_8.2
DBxref	InterPro:IPR001138
DBxref	InterPro:IPR036864
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger CBS 513.88 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
An08	supercontig	An08:1144984..1147084 +

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CBS51388_005324-T1, CBS51388_005324-T1 (mRNA) Aspergillus niger CBS 513.88