|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:1154442..1155821+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005328-T1 ID=CBS51388_005328-T1|Name=CBS51388_005328-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1380bp|location=Sequence derived from alignment at An08:1154442..1155821+ (Aspergillus niger CBS 513.88)
ATGGTTTCCAAATGCTATCGGAAGATTGCCGAAGCATGTGTCACATATCT
GTCCTTTGACCGGTCTATGAGTCAGGATGCCGCAGCCATAGTGTCCCAGC
ATCCCTTTTACCGCTATGCGGCTCAATATTGGGACTACCATGGTCAACTT
GACCCAGTAGCTGATGACCTCCTACTGCCACTGCTGATGTCGAAGGAAAA
GGTGGCGTTGTATGCACAGCACATGGCTCTGCGGGGTTGCCGCTCTTATG
ATATGAAGCTAGACAATCCACAAGACATCACCGGGCTTCACTTGGCAGCT
TACTTTGGGCTGATCGATATTGCTAAAGAGCTTGTCAAGCACGGCGGCAA
TCTGGGTGCAAAGGACAGCTGGGGAAGAAATGTTTTTGCGTGGGCTGCAG
AATTTGGACGCAAGAAATTTTTCGAGTATTTTCACGACAACGTCAGTCTT
TGGCACCAAGAAGACAAGTTTTGTATGACGCCACTGCAACTGGCATCATC
GAATGGCCACAAACATGTTGCAAAGATTCTGGAGAACCGACATTGTGGCC
CCGAGAAAGAAGAAACCTCAACTTCCGAAGCTGAATTGGTGTACGCAGCT
CGGATTGGTGATCAACGTTTGGTTGAAGCGCTTTTGTGCCAAGGAGTCTC
GGCAAATTGCCAGCAGGATAGGCGTACACCTTTGCAGTTGGCAGCTATTG
GCGGGCATCTGGCTGTCGGGAAAGCTCTGCTAGAAAATGGAGCCGATCCA
AACATGACTGACTGGCACGGACGGACTCCTTTGCATCATGCAGTCCTAAG
TGGGAAAGAAGAGGTCGTGAAGCTACTCCTGGACTATGGTGTAGACCTGA
ATCTCAAAGACAGAAATGGTGACACTGCTTTGATATGCGCAGTCACTGTA
AGACGTGACCCGATAGTTCGCCTCCTCTTGAGCTACAAACCTCAGCTTGA
TTCTCAGGACAGCTATGGTAACACGGCTTTGATCGAGGCAGTTGCCTTTT
GTTCCGATGAGACGTTCGGTGAACTGTTACAAAGTGGCCCCGATCTGAAT
ATTCAGAATAGAAATGGTGTGACCGCCTTGATTCGTGCAGCCCTTGACAG
ACAAGTAGAAAAGGCCCGTCTCTTGTTGGCATCTGGGCCGCAGGTTAATA
TTGGCGACGTTACAGGCGCCACGGCTTTGATTTATGCAGCCCAAAATGGG
TGCTACGAGATTGTTGAAGCACTAGTCCAGGGTGGAGCCCATCTGGACAT
TCAGGACAATAGAGATCAGACGGCTCTTCTGTGGGCTATGCGAAGAGATC
ACGAGCCGATAACTACTTTACTTATCCTAAGTGGTGTAGATATAGAGATA
ACCGCAGATAAACAGGGGGTTTTCCGCTGA back to topCoding sequence (CDS) from alignment at An08:1154442..1155821+ >CBS51388_005328-T1 ID=CBS51388_005328-T1|Name=CBS51388_005328-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1380bp|location=Sequence derived from alignment at An08:1154442..1155821+ (Aspergillus niger CBS 513.88)
ATGGTTTCCAAATGCTATCGGAAGATTGCCGAAGCATGTGTCACATATCT
GTCCTTTGACCGGTCTATGAGTCAGGATGCCGCAGCCATAGTGTCCCAGC
ATCCCTTTTACCGCTATGCGGCTCAATATTGGGACTACCATGGTCAACTT
GACCCAGTAGCTGATGACCTCCTACTGCCACTGCTGATGTCGAAGGAAAA
GGTGGCGTTGTATGCACAGCACATGGCTCTGCGGGGTTGCCGCTCTTATG
ATATGAAGCTAGACAATCCACAAGACATCACCGGGCTTCACTTGGCAGCT
TACTTTGGGCTGATCGATATTGCTAAAGAGCTTGTCAAGCACGGCGGCAA
TCTGGGTGCAAAGGACAGCTGGGGAAGAAATGTTTTTGCGTGGGCTGCAG
AATTTGGACGCAAGAAATTTTTCGAGTATTTTCACGACAACGTCAGTCTT
TGGCACCAAGAAGACAAGTTTTGTATGACGCCACTGCAACTGGCATCATC
GAATGGCCACAAACATGTTGCAAAGATTCTGGAGAACCGACATTGTGGCC
CCGAGAAAGAAGAAACCTCAACTTCCGAAGCTGAATTGGTGTACGCAGCT
CGGATTGGTGATCAACGTTTGGTTGAAGCGCTTTTGTGCCAAGGAGTCTC
GGCAAATTGCCAGCAGGATAGGCGTACACCTTTGCAGTTGGCAGCTATTG
GCGGGCATCTGGCTGTCGGGAAAGCTCTGCTAGAAAATGGAGCCGATCCA
AACATGACTGACTGGCACGGACGGACTCCTTTGCATCATGCAGTCCTAAG
TGGGAAAGAAGAGGTCGTGAAGCTACTCCTGGACTATGGTGTAGACCTGA
ATCTCAAAGACAGAAATGGTGACACTGCTTTGATATGCGCAGTCACTGTA
AGACGTGACCCGATAGTTCGCCTCCTCTTGAGCTACAAACCTCAGCTTGA
TTCTCAGGACAGCTATGGTAACACGGCTTTGATCGAGGCAGTTGCCTTTT
GTTCCGATGAGACGTTCGGTGAACTGTTACAAAGTGGCCCCGATCTGAAT
ATTCAGAATAGAAATGGTGTGACCGCCTTGATTCGTGCAGCCCTTGACAG
ACAAGTAGAAAAGGCCCGTCTCTTGTTGGCATCTGGGCCGCAGGTTAATA
TTGGCGACGTTACAGGCGCCACGGCTTTGATTTATGCAGCCCAAAATGGG
TGCTACGAGATTGTTGAAGCACTAGTCCAGGGTGGAGCCCATCTGGACAT
TCAGGACAATAGAGATCAGACGGCTCTTCTGTGGGCTATGCGAAGAGATC
ACGAGCCGATAACTACTTTACTTATCCTAAGTGGTGTAGATATAGAGATA
ACCGCAGATAAACAGGGGGTTTTCCGCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8.2 |
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR002110 |
| DBxref | PFAM:PF13857 |
| DBxref | PFAM:PF13637 |
| DBxref | PFAM:PF13606 |
| DBxref | PFAM:PF12796 |
| DBxref | PFAM:PF00023 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:1154442..1155821 + |
|
