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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:1339059..1340638+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005384-T1 ID=CBS51388_005384-T1|Name=CBS51388_005384-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1580bp|location=Sequence derived from alignment at An08:1339059..1340638+ (Aspergillus niger CBS 513.88)
ATGATTGCCGCCAGGAACTTTGTCGCTCCCGCCCGTCAATGCTTGCGGAC
AACACGTGTGTCCCCTCGCATTGCCTCGCCCTTCTCGCAGGTAATCTACC
GACCGCTTTCCTCGACAACATGGCCTGGAAGGAATCTCGATCTAACTGCA
CTTTTAGCTCCGCACTTACTCCGCCGCTGCCGATGAGCGCGTCGCTAAGT
TCAAGGGTCAGAAGGATACTGATGTATGTCGCGTCCCGGGCAACGCCTGA
AACATTTTTTTGCTTCCATCCTTTGGTCCGGTAGCTTCCGCCGCAACCTG
CGACAACGGCCTGTATTCGACAGCTCTTCCGAAGGATGGATCATTTCTGA
ATGGCGTTGTTGACATTATGTGTCCTGATAGGGAAAATACACTGTTACTC
TGATCGAGGGTGATGGTATCGGTCCCGAGATCTCCCAGTCGGTGAAGGAT
ATCTTCGCTGCCGCAAACGTACGCCTCCCGCTACTTCCGATCGCCTCTAG
TATACAAATCAGCGATGCTAAATTACCTGTGTGCAGGCCCCTATCAAGTG
GGAGCCCGTCGATGTTACTCCCATCCTGAAGGACGGCAAGACCGCCATCC
CCGACGACGCCATCAAGAGCGTCCAGAAGAACTACGTTGCGCTCAAGGGT
CCTCTTGCTGTATGTCCATGCTTCCTAGACTGTTTTGCGATAAGTCTTTC
TCTAAACGCTTTGTCACATAGACCCCCGTCGGCAAGGGACACGTCTCTCT
GAACCTGACCCTCCGTCGTACTTTCAACCTCTTCGCCAACGTCCGTCCCT
GCCGCTCCGTTGCCGGTTACAAGACCCCCTACGACAATGTCGACACCGTC
CTGATCCGTGAGAACACCGAGGGTGAATACTCCGGCATTGAGCACGTCGT
CGTCGACGGTGTTGTCCAGAGCATCAAGCTCATCACCAAGGAGGCCTCCG
AGAGAGTGCTCCGCTTCGCCTTCCAGTACGCTCGTTCCATCAACAAGAAG
AAGGTCCGTGTCGTGCACAAGGCCACCATCATGAAGATGTCCGACGGTCT
CTTCCTCAACCTTGCTCGTGACATTGCCAAGGAGTTCCCCGACGTCGAGT
TCGATGCTGAGCTGCTGGACAACTCGTGCCTGAAGATCGTTACCGACCCC
ACCCCCTACAACGACAAGGTCCTTGTCATGCCCAACCTGTATGGTGACAT
TCTGTCCGATATGTGCGCCGGTCTGATCGGTGGTCTTGGTCTGACCCCCT
CCGGTAACATTGGTGACGAGTGCTCCATCTTCGAGGCTGTCCACGGTTCC
GCCCCCGACATTGCTGGCAAGGGTCTTGCCAACCCCACTGCTCTGCTTCT
GAGCAGTATCATGATGCTTCAGCACATGGGTCTGAATGAGCACGCCACTC
GTATCCAGAAGGCTACTTTCGACACCCTCGCCGAAGGAAAGGTAAGCTAG
CATTTTATCAAAGTGACGGTACCATTGCGAGACACGATGCTAACAATTGC
GATTTTAGGCCCTCACCGGTGACTTGGGTGGTTCCGCCAAGACCCACGAG
TATGCTGAGGCCATCATGAAGCGTCTGTAA back to topCoding sequence (CDS) from alignment at An08:1339059..1340638+ >CBS51388_005384-T1 ID=CBS51388_005384-T1|Name=CBS51388_005384-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6948bp|location=Sequence derived from alignment at An08:1339059..1340638+ (Aspergillus niger CBS 513.88)
ATGATTGCCGCCAGGAACTTTGTCGCTCCCGCCCGTCAATGCTTGCGGAC
AACACGTGTGTCCCCTCGCATTGCCTCGCCCTTCTCGCAGCTCCGCACTT
ACTCCGCCGCTGCCGATGAGCGCGTCGCTAAGTTCAAGGGTCAGAAGGAT
ACTGATGGAAAATACACTGTTACTCTGATCGAGGGTGATGGTATCGGTCC
CGAGATCTCCCAGTCGGTGAAGGATATCTTCGCTGCCGCAAACGCCCCTA
TCAAGTGGGAGCCCGTCGATGTTACTCCCATCCTGAAGGACGGCAAGACC
GCCATCCCCGACGACGCCATCAAGAGCGTCCAGAAGAACTACGTTGCGCT
CAAGGGTCCTCTTGCTACCCCCGTCGGCAAGGGACACGTCTCTCTGAACC
TGACCCTCCGTCGTACTTTCAACCTCTTCGCCAACGTCCGTCCCTGCCGC
TCCGTTGCCGGTTACAAGACCCCCTACGACAATGTCGACACCGTCCTGAT
CCGTGAGAACACCGAGGGTGAATACTCCGGCATTGAGCACGTCGTCGTCG
ACGGTGTTGTCCAGAGCATCAAGCTCATCACCAAGGAGGCCTCCGAGAGA
GTGCTCCGCTTCGCCTTCCAGTACGCTCGTTCCATCAACAAGAAGAAGGT
CCGTGTCGTGCACAAGGCCACCATCATGAAGATGTCCGACGGTCTCTTCC
TCAACCTTGCTCGTGACATTGCCAAGGAGTTCCCCGACGTCGAGTTCGAT
GCTGAGCTGCTGGACAACTCGTGCCTGAAGATCGTTACCGACCCCACCCC
CTACAACGACAAGGTCCTTGTCATGCCCAACCTGTATGGTGACATTCTGT
CCGATATGTGCGCCGGTCTGATCGGTGGTCTTGGTCTGACCCCCTCCGGT
AACATTGGTGACGAGTGCTCCATCTTCGAGGCTGTCCACGGTTCCGCCCC
CGACATTGCTGGCAAGGGTCTTGCCAACCCCACTGCTCTGCTTCTGAGCA
GTATCATGATGCTTCAGCACATGGGTCTGAATGAGCACGCCACTCGTATC
CAGAAGGCTACTTTCGACACCCTCGCCGAAGGAAAGGCCCTCACCGGTGA
CTTGGGTGGTTCCGCCAAGACCCACGAGTATGCTGAGGCCATCATGAAGC
GTCTGTAAATGATTGCCGCCAGGAACTTTGTCGCTCCCGCCCGTCAATGC
TTGCGGACAACACGTGTGTCCCCTCGCATTGCCTCGCCCTTCTCGCAGCT
CCGCACTTACTCCGCCGCTGCCGATGAGCGCGTCGCTAAGTTCAAGGGTC
AGAAGGATACTGATGGAAAATACACTGTTACTCTGATCGAGGGTGATGGT
ATCGGTCCCGAGATCTCCCAGTCGGTGAAGGATATCTTCGCTGCCGCAAA
CGCCCCTATCAAGTGGGAGCCCGTCGATGTTACTCCCATCCTGAAGGACG
GCAAGACCGCCATCCCCGACGACGCCATCAAGAGCGTCCAGAAGAACTAC
GTTGCGCTCAAGGGTCCTCTTGCTACCCCCGTCGGCAAGGGACACGTCTC
TCTGAACCTGACCCTCCGTCGTACTTTCAACCTCTTCGCCAACGTCCGTC
CCTGCCGCTCCGTTGCCGGTTACAAGACCCCCTACGACAATGTCGACACC
GTCCTGATCCGTGAGAACACCGAGGGTGAATACTCCGGCATTGAGCACGT
CGTCGTCGACGGTGTTGTCCAGAGCATCAAGCTCATCACCAAGGAGGCCT
CCGAGAGAGTGCTCCGCTTCGCCTTCCAGTACGCTCGTTCCATCAACAAG
AAGAAGGTCCGTGTCGTGCACAAGGCCACCATCATGAAGATGTCCGACGG
TCTCTTCCTCAACCTTGCTCGTGACATTGCCAAGGAGTTCCCCGACGTCG
AGTTCGATGCTGAGCTGCTGGACAACTCGTGCCTGAAGATCGTTACCGAC
CCCACCCCCTACAACGACAAGGTCCTTGTCATGCCCAACCTGTATGGTGA
CATTCTGTCCGATATGTGCGCCGGTCTGATCGGTGGTCTTGGTCTGACCC
CCTCCGGTAACATTGGTGACGAGTGCTCCATCTTCGAGGCTGTCCACGGT
TCCGCCCCCGACATTGCTGGCAAGGGTCTTGCCAACCCCACTGCTCTGCT
TCTGAGCAGTATCATGATGCTTCAGCACATGGGTCTGAATGAGCACGCCA
CTCGTATCCAGAAGGCTACTTTCGACACCCTCGCCGAAGGAAAGGCCCTC
ACCGGTGACTTGGGTGGTTCCGCCAAGACCCACGAGTATGCTGAGGCCAT
CATGAAGCGTCTGTAAATGATTGCCGCCAGGAACTTTGTCGCTCCCGCCC
GTCAATGCTTGCGGACAACACGTGTGTCCCCTCGCATTGCCTCGCCCTTC
TCGCAGCTCCGCACTTACTCCGCCGCTGCCGATGAGCGCGTCGCTAAGTT
CAAGGGTCAGAAGGATACTGATGGAAAATACACTGTTACTCTGATCGAGG
GTGATGGTATCGGTCCCGAGATCTCCCAGTCGGTGAAGGATATCTTCGCT
GCCGCAAACGCCCCTATCAAGTGGGAGCCCGTCGATGTTACTCCCATCCT
GAAGGACGGCAAGACCGCCATCCCCGACGACGCCATCAAGAGCGTCCAGA
AGAACTACGTTGCGCTCAAGGGTCCTCTTGCTACCCCCGTCGGCAAGGGA
CACGTCTCTCTGAACCTGACCCTCCGTCGTACTTTCAACCTCTTCGCCAA
CGTCCGTCCCTGCCGCTCCGTTGCCGGTTACAAGACCCCCTACGACAATG
TCGACACCGTCCTGATCCGTGAGAACACCGAGGGTGAATACTCCGGCATT
GAGCACGTCGTCGTCGACGGTGTTGTCCAGAGCATCAAGCTCATCACCAA
GGAGGCCTCCGAGAGAGTGCTCCGCTTCGCCTTCCAGTACGCTCGTTCCA
TCAACAAGAAGAAGGTCCGTGTCGTGCACAAGGCCACCATCATGAAGATG
TCCGACGGTCTCTTCCTCAACCTTGCTCGTGACATTGCCAAGGAGTTCCC
CGACGTCGAGTTCGATGCTGAGCTGCTGGACAACTCGTGCCTGAAGATCG
TTACCGACCCCACCCCCTACAACGACAAGGTCCTTGTCATGCCCAACCTG
TATGGTGACATTCTGTCCGATATGTGCGCCGGTCTGATCGGTGGTCTTGG
TCTGACCCCCTCCGGTAACATTGGTGACGAGTGCTCCATCTTCGAGGCTG
TCCACGGTTCCGCCCCCGACATTGCTGGCAAGGGTCTTGCCAACCCCACT
GCTCTGCTTCTGAGCAGTATCATGATGCTTCAGCACATGGGTCTGAATGA
GCACGCCACTCGTATCCAGAAGGCTACTTTCGACACCCTCGCCGAAGGAA
AGGCCCTCACCGGTGACTTGGGTGGTTCCGCCAAGACCCACGAGTATGCT
GAGGCCATCATGAAGCGTCTGTAAATGATTGCCGCCAGGAACTTTGTCGC
TCCCGCCCGTCAATGCTTGCGGACAACACGTGTGTCCCCTCGCATTGCCT
CGCCCTTCTCGCAGCTCCGCACTTACTCCGCCGCTGCCGATGAGCGCGTC
GCTAAGTTCAAGGGTCAGAAGGATACTGATGGAAAATACACTGTTACTCT
GATCGAGGGTGATGGTATCGGTCCCGAGATCTCCCAGTCGGTGAAGGATA
TCTTCGCTGCCGCAAACGCCCCTATCAAGTGGGAGCCCGTCGATGTTACT
CCCATCCTGAAGGACGGCAAGACCGCCATCCCCGACGACGCCATCAAGAG
CGTCCAGAAGAACTACGTTGCGCTCAAGGGTCCTCTTGCTACCCCCGTCG
GCAAGGGACACGTCTCTCTGAACCTGACCCTCCGTCGTACTTTCAACCTC
TTCGCCAACGTCCGTCCCTGCCGCTCCGTTGCCGGTTACAAGACCCCCTA
CGACAATGTCGACACCGTCCTGATCCGTGAGAACACCGAGGGTGAATACT
CCGGCATTGAGCACGTCGTCGTCGACGGTGTTGTCCAGAGCATCAAGCTC
ATCACCAAGGAGGCCTCCGAGAGAGTGCTCCGCTTCGCCTTCCAGTACGC
TCGTTCCATCAACAAGAAGAAGGTCCGTGTCGTGCACAAGGCCACCATCA
TGAAGATGTCCGACGGTCTCTTCCTCAACCTTGCTCGTGACATTGCCAAG
GAGTTCCCCGACGTCGAGTTCGATGCTGAGCTGCTGGACAACTCGTGCCT
GAAGATCGTTACCGACCCCACCCCCTACAACGACAAGGTCCTTGTCATGC
CCAACCTGTATGGTGACATTCTGTCCGATATGTGCGCCGGTCTGATCGGT
GGTCTTGGTCTGACCCCCTCCGGTAACATTGGTGACGAGTGCTCCATCTT
CGAGGCTGTCCACGGTTCCGCCCCCGACATTGCTGGCAAGGGTCTTGCCA
ACCCCACTGCTCTGCTTCTGAGCAGTATCATGATGCTTCAGCACATGGGT
CTGAATGAGCACGCCACTCGTATCCAGAAGGCTACTTTCGACACCCTCGC
CGAAGGAAAGGCCCTCACCGGTGACTTGGGTGGTTCCGCCAAGACCCACG
AGTATGCTGAGGCCATCATGAAGCGTCTGTAAATGATTGCCGCCAGGAAC
TTTGTCGCTCCCGCCCGTCAATGCTTGCGGACAACACGTGTGTCCCCTCG
CATTGCCTCGCCCTTCTCGCAGCTCCGCACTTACTCCGCCGCTGCCGATG
AGCGCGTCGCTAAGTTCAAGGGTCAGAAGGATACTGATGGAAAATACACT
GTTACTCTGATCGAGGGTGATGGTATCGGTCCCGAGATCTCCCAGTCGGT
GAAGGATATCTTCGCTGCCGCAAACGCCCCTATCAAGTGGGAGCCCGTCG
ATGTTACTCCCATCCTGAAGGACGGCAAGACCGCCATCCCCGACGACGCC
ATCAAGAGCGTCCAGAAGAACTACGTTGCGCTCAAGGGTCCTCTTGCTAC
CCCCGTCGGCAAGGGACACGTCTCTCTGAACCTGACCCTCCGTCGTACTT
TCAACCTCTTCGCCAACGTCCGTCCCTGCCGCTCCGTTGCCGGTTACAAG
ACCCCCTACGACAATGTCGACACCGTCCTGATCCGTGAGAACACCGAGGG
TGAATACTCCGGCATTGAGCACGTCGTCGTCGACGGTGTTGTCCAGAGCA
TCAAGCTCATCACCAAGGAGGCCTCCGAGAGAGTGCTCCGCTTCGCCTTC
CAGTACGCTCGTTCCATCAACAAGAAGAAGGTCCGTGTCGTGCACAAGGC
CACCATCATGAAGATGTCCGACGGTCTCTTCCTCAACCTTGCTCGTGACA
TTGCCAAGGAGTTCCCCGACGTCGAGTTCGATGCTGAGCTGCTGGACAAC
TCGTGCCTGAAGATCGTTACCGACCCCACCCCCTACAACGACAAGGTCCT
TGTCATGCCCAACCTGTATGGTGACATTCTGTCCGATATGTGCGCCGGTC
TGATCGGTGGTCTTGGTCTGACCCCCTCCGGTAACATTGGTGACGAGTGC
TCCATCTTCGAGGCTGTCCACGGTTCCGCCCCCGACATTGCTGGCAAGGG
TCTTGCCAACCCCACTGCTCTGCTTCTGAGCAGTATCATGATGCTTCAGC
ACATGGGTCTGAATGAGCACGCCACTCGTATCCAGAAGGCTACTTTCGAC
ACCCTCGCCGAAGGAAAGGCCCTCACCGGTGACTTGGGTGGTTCCGCCAA
GACCCACGAGTATGCTGAGGCCATCATGAAGCGTCTGTAAATGATTGCCG
CCAGGAACTTTGTCGCTCCCGCCCGTCAATGCTTGCGGACAACACGTGTG
TCCCCTCGCATTGCCTCGCCCTTCTCGCAGCTCCGCACTTACTCCGCCGC
TGCCGATGAGCGCGTCGCTAAGTTCAAGGGTCAGAAGGATACTGATGGAA
AATACACTGTTACTCTGATCGAGGGTGATGGTATCGGTCCCGAGATCTCC
CAGTCGGTGAAGGATATCTTCGCTGCCGCAAACGCCCCTATCAAGTGGGA
GCCCGTCGATGTTACTCCCATCCTGAAGGACGGCAAGACCGCCATCCCCG
ACGACGCCATCAAGAGCGTCCAGAAGAACTACGTTGCGCTCAAGGGTCCT
CTTGCTACCCCCGTCGGCAAGGGACACGTCTCTCTGAACCTGACCCTCCG
TCGTACTTTCAACCTCTTCGCCAACGTCCGTCCCTGCCGCTCCGTTGCCG
GTTACAAGACCCCCTACGACAATGTCGACACCGTCCTGATCCGTGAGAAC
ACCGAGGGTGAATACTCCGGCATTGAGCACGTCGTCGTCGACGGTGTTGT
CCAGAGCATCAAGCTCATCACCAAGGAGGCCTCCGAGAGAGTGCTCCGCT
TCGCCTTCCAGTACGCTCGTTCCATCAACAAGAAGAAGGTCCGTGTCGTG
CACAAGGCCACCATCATGAAGATGTCCGACGGTCTCTTCCTCAACCTTGC
TCGTGACATTGCCAAGGAGTTCCCCGACGTCGAGTTCGATGCTGAGCTGC
TGGACAACTCGTGCCTGAAGATCGTTACCGACCCCACCCCCTACAACGAC
AAGGTCCTTGTCATGCCCAACCTGTATGGTGACATTCTGTCCGATATGTG
CGCCGGTCTGATCGGTGGTCTTGGTCTGACCCCCTCCGGTAACATTGGTG
ACGAGTGCTCCATCTTCGAGGCTGTCCACGGTTCCGCCCCCGACATTGCT
GGCAAGGGTCTTGCCAACCCCACTGCTCTGCTTCTGAGCAGTATCATGAT
GCTTCAGCACATGGGTCTGAATGAGCACGCCACTCGTATCCAGAAGGCTA
CTTTCGACACCCTCGCCGAAGGAAAGGCCCTCACCGGTGACTTGGGTGGT
TCCGCCAAGACCCACGAGTATGCTGAGGCCATCATGAAGCGTCTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006099 | tricarboxylic acid cycle |
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000287 | magnesium ion binding |
| GO:0051287 | NAD binding |
| GO:0004449 | isocitrate dehydrogenase (NAD+) activity |
| GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR019818 |
| DBxref | InterPro:IPR004434 |
| DBxref | InterPro:IPR024084 |
| DBxref | PFAM:PF00180 |
| Product | NAD-dependent isocitrate dehydrogenase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:1339059..1340638 + |
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