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CBS51388_005392-T1, CBS51388_005392-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005392-T1
Unique NameCBS51388_005392-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:1360295..1361245-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005392-T1 ID=CBS51388_005392-T1|Name=CBS51388_005392-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=951bp|location=Sequence derived from alignment at An08:1360295..1361245- (Aspergillus niger CBS 513.88)
ATGGAATCTACTCGTACCATCTCCGAGCTGAAGTCGTCCTTTATCAGGGC
ACAAGTCCGAATTCTATCTGAAGGCCTCGAGCCAGCCGAGGACTGGCGAA
ACTACGCCGCTGAGACCGAAGAGGATGATCTCAGTGATAAAGTGGTCGGT
GATGTCCTACAAAAGTGTAAGTGCAAGCATCCAGAATTGAGTCTTCACTT
TTACCAGCCTGTAATTTCAGCACAAGCTTGCTCACCCTGTACCGTGGTCA
ATAAGCATATCATTCTTCAAATTTGCGTATGTTTCTAATGAACCTATGGG
ACACCAGTAAACGCCGCTTTGAAACAACACAGTCGCATCGTCTATTCCTC
TCAAGCTGTTCAGCATGTCGCTCAGCAAATTACCAGCCTATACTGGTCAT
CGGTGACCCAGGCAATCCCCAACCCGGGATCTTTGTTAAAAGGAGTCGAG
AGATCAGTGGATCTATCCAGTCATCTGTGAGCCCTGGAATTCCGCTACTG
GGAAATGGGATAGATCTAATATCGCAGGAATATCGCACAACTCCCGTTGG
AGCTGGAAAACCAATCCGCGAGCGAAGCACAGCGGGCTAGGTCTGGGATA
CCCCTCGCACCGATCGCAGTTTCAGCTGGTTAATTGTGATACAGATACCA
AGAACTACGGGAGCGTCTGACGGATCTGGATCGTTTACGGCAACAGCGAC
AACGGCGCCTAGATCAATTACGACAGTTGCAGCAATTACTGGAGCCGTTC
CGGGAACCGCAGAAAAACATCCAGCCTAATCTGGTGACGAGAGATGGCGA
GCTAGTCCAGGAGTTAGACAAGATGAGGATGCTGGTTGCGCGAGTTGGCG
GTCGAGTCGAGCAGGGAAAGAAGAAACTGGGCGCTCAGGAGCAAGACAAG
CCGTATCTGGGGTGCGACCAGAAACTAGATGCCTTATTGGACATGACGTG
A
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Coding sequence (CDS) from alignment at An08:1360295..1361245-

>CBS51388_005392-T1 ID=CBS51388_005392-T1|Name=CBS51388_005392-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2820bp|location=Sequence derived from alignment at An08:1360295..1361245- (Aspergillus niger CBS 513.88)
ATACCAAGAACTACGGGAGCGTCTGACGGATCTGGATCGTTTACGGCAAC
AGCGACAACGGCGCCTAGATCAATTACGACAGTTGCAGCAATTACTGGAG
CCGTTCCGGGAACCGCAGAAAAACATCCAGCCTAATCTGGTGACGAGAGA
TGGCGAGCTAGTCCAGGAGTTAGACAAGATGAGGATGCTGGTTGCGCGAG
TTGGCGGTCGAGTCGAGCAGGGAAAGAAGAAACTGGGCGCTCAGGAGCAA
GACAAGCCGTATCTGGGGTGCGACCAGAAACTAGATGCCTTATTGGACAT
GACGTGAGAATATCGCACAACTCCCGTTGGAGCTGGAAAACCAATCCGCG
AGCGAAGCACAGCGGGCTAGTAAACGCCGCTTTGAAACAACACAGTCGCA
TCGTCTATTCCTCTCAAGCTGTTCAGCATGTCGCTCAGCAAATTACCAGC
CTATACTGGTCATCGGTGACCCAGGCAATCCCCAACCCGGGATCTTTGTT
AAAAGGAGTCGAGAGATCAGTGGATCTATCCAGTCATCTATGGAATCTAC
TCGTACCATCTCCGAGCTGAAGTCGTCCTTTATCAGGGCACAAGTCCGAA
TTCTATCTGAAGGCCTCGAGCCAGCCGAGGACTGGCGAAACTACGCCGCT
GAGACCGAAGAGGATGATCTCAGTGATAAAGTGGTCGGTGATGTCCTACA
AAAGTATACCAAGAACTACGGGAGCGTCTGACGGATCTGGATCGTTTACG
GCAACAGCGACAACGGCGCCTAGATCAATTACGACAGTTGCAGCAATTAC
TGGAGCCGTTCCGGGAACCGCAGAAAAACATCCAGCCTAATCTGGTGACG
AGAGATGGCGAGCTAGTCCAGGAGTTAGACAAGATGAGGATGCTGGTTGC
GCGAGTTGGCGGTCGAGTCGAGCAGGGAAAGAAGAAACTGGGCGCTCAGG
AGCAAGACAAGCCGTATCTGGGGTGCGACCAGAAACTAGATGCCTTATTG
GACATGACGTGAGAATATCGCACAACTCCCGTTGGAGCTGGAAAACCAAT
CCGCGAGCGAAGCACAGCGGGCTAGTAAACGCCGCTTTGAAACAACACAG
TCGCATCGTCTATTCCTCTCAAGCTGTTCAGCATGTCGCTCAGCAAATTA
CCAGCCTATACTGGTCATCGGTGACCCAGGCAATCCCCAACCCGGGATCT
TTGTTAAAAGGAGTCGAGAGATCAGTGGATCTATCCAGTCATCTATGGAA
TCTACTCGTACCATCTCCGAGCTGAAGTCGTCCTTTATCAGGGCACAAGT
CCGAATTCTATCTGAAGGCCTCGAGCCAGCCGAGGACTGGCGAAACTACG
CCGCTGAGACCGAAGAGGATGATCTCAGTGATAAAGTGGTCGGTGATGTC
CTACAAAAGTATACCAAGAACTACGGGAGCGTCTGACGGATCTGGATCGT
TTACGGCAACAGCGACAACGGCGCCTAGATCAATTACGACAGTTGCAGCA
ATTACTGGAGCCGTTCCGGGAACCGCAGAAAAACATCCAGCCTAATCTGG
TGACGAGAGATGGCGAGCTAGTCCAGGAGTTAGACAAGATGAGGATGCTG
GTTGCGCGAGTTGGCGGTCGAGTCGAGCAGGGAAAGAAGAAACTGGGCGC
TCAGGAGCAAGACAAGCCGTATCTGGGGTGCGACCAGAAACTAGATGCCT
TATTGGACATGACGTGAGAATATCGCACAACTCCCGTTGGAGCTGGAAAA
CCAATCCGCGAGCGAAGCACAGCGGGCTAGTAAACGCCGCTTTGAAACAA
CACAGTCGCATCGTCTATTCCTCTCAAGCTGTTCAGCATGTCGCTCAGCA
AATTACCAGCCTATACTGGTCATCGGTGACCCAGGCAATCCCCAACCCGG
GATCTTTGTTAAAAGGAGTCGAGAGATCAGTGGATCTATCCAGTCATCTA
TGGAATCTACTCGTACCATCTCCGAGCTGAAGTCGTCCTTTATCAGGGCA
CAAGTCCGAATTCTATCTGAAGGCCTCGAGCCAGCCGAGGACTGGCGAAA
CTACGCCGCTGAGACCGAAGAGGATGATCTCAGTGATAAAGTGGTCGGTG
ATGTCCTACAAAAGTATACCAAGAACTACGGGAGCGTCTGACGGATCTGG
ATCGTTTACGGCAACAGCGACAACGGCGCCTAGATCAATTACGACAGTTG
CAGCAATTACTGGAGCCGTTCCGGGAACCGCAGAAAAACATCCAGCCTAA
TCTGGTGACGAGAGATGGCGAGCTAGTCCAGGAGTTAGACAAGATGAGGA
TGCTGGTTGCGCGAGTTGGCGGTCGAGTCGAGCAGGGAAAGAAGAAACTG
GGCGCTCAGGAGCAAGACAAGCCGTATCTGGGGTGCGACCAGAAACTAGA
TGCCTTATTGGACATGACGTGAGAATATCGCACAACTCCCGTTGGAGCTG
GAAAACCAATCCGCGAGCGAAGCACAGCGGGCTAGTAAACGCCGCTTTGA
AACAACACAGTCGCATCGTCTATTCCTCTCAAGCTGTTCAGCATGTCGCT
CAGCAAATTACCAGCCTATACTGGTCATCGGTGACCCAGGCAATCCCCAA
CCCGGGATCTTTGTTAAAAGGAGTCGAGAGATCAGTGGATCTATCCAGTC
ATCTATGGAATCTACTCGTACCATCTCCGAGCTGAAGTCGTCCTTTATCA
GGGCACAAGTCCGAATTCTATCTGAAGGCCTCGAGCCAGCCGAGGACTGG
CGAAACTACGCCGCTGAGACCGAAGAGGATGATCTCAGTGATAAAGTGGT
CGGTGATGTCCTACAAAAGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0031511Mis6-Sim4 complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005392CBS51388_005392Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005392-T1CBS51388_005392-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005392-T1.cdsCBS51388_005392-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005392-T1.exon4CBS51388_005392-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_005392-T1.exon3CBS51388_005392-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_005392-T1.exon2CBS51388_005392-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_005392-T1.exon1CBS51388_005392-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR025207
DBxrefPFAM:PF13093
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:1360295..1361245 -
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