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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:1709118..1710143- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005500-T1 ID=CBS51388_005500-T1|Name=CBS51388_005500-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1026bp|location=Sequence derived from alignment at An08:1709118..1710143- (Aspergillus niger CBS 513.88)
ATGTCTTTGATTCACGCCGACAACTTGGCTCCTCAGCCTATCACTGATAT
CTTCACCGATGACACCTGCATCGACCGCCGCAAGTGCCACCGCACCGTTC
CCATGAAGGTGCTGGCTCTGGGTGTGGGAAGAACCGGAACTGCTTGTAGG
TTCTACTTGGGAGGCAGACGACGGATTACATGACTGACTGGTTCTGTGAA
TAGCCCTCCGCATTGCCCTCGAACGTCTGGGCTACGTCAAGACCTACCAC
ATGATGTCCGCCAGTATGGAGAACCCTCCCGACTGCTTGATGTGGCACGA
TGCTCTCGCTGCCAAGTACGACGGTGTCGGCGAGTTCGGTAGAAAGGAGT
GGGATCAGCTTCTGGGAGACTGCCAGGTAGGTCGCTATTAGATCGCTCGC
AACGAACTCGCACGCTAACTCTTCCAAAAGGCCGTCTGTGACTGGCCTGC
CTGTGCCTTTGCTAAGGAGCTGATCGAAGCCTACCCCAACGCCAAGGTCA
TTCTGACCACCCGTGATGTTGAATCGTGGCATGCGTACGTTATACTCCGT
TCTGAGATATAAAGATCATCAGTCTAATCCCTTTCCGCAGTTCCGTCATG
AAGACCGTTTGGTGGCGTGTCTCCGACCCCGAGCACAAGTTCGTTTCGAA
CTTCAGCTGGGCCGCTAGCATGTACTACCCCATGCTCAACAAGTTCTTCC
AGACCTTCTTCCGCGGCGACTTCCCCAACAAGGGCAAGCAGGTCTACCTT
GACCACGTTGAGGAGGTCCGCAGCCTCGTTCCTCCTGAGAGGCTCCTCGA
GTACAAGATCGGCGAGGGCTGGGGCCCGCTTTGCGAGTTCCTGGGTGAGG
AGGTCCCCGACACTCCTTTCCCCCGCGGTAACGACATGGCCGACTTCTTC
AAGCGCTGCCGCGGCCGCAACAGGCGCCAGATGCTGAACGCCGCTCTGCA
GGCTGTCACTATGGGTGGTGCTCTGCTGGCGACGGGCTTGGTTGCCACCA
TGGCCTTCAAGCGTTTCTCTCGGTAG back to topCoding sequence (CDS) from alignment at An08:1709118..1710143- >CBS51388_005500-T1 ID=CBS51388_005500-T1|Name=CBS51388_005500-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3432bp|location=Sequence derived from alignment at An08:1709118..1710143- (Aspergillus niger CBS 513.88)
TTCCGTCATGAAGACCGTTTGGTGGCGTGTCTCCGACCCCGAGCACAAGT
TCGTTTCGAACTTCAGCTGGGCCGCTAGCATGTACTACCCCATGCTCAAC
AAGTTCTTCCAGACCTTCTTCCGCGGCGACTTCCCCAACAAGGGCAAGCA
GGTCTACCTTGACCACGTTGAGGAGGTCCGCAGCCTCGTTCCTCCTGAGA
GGCTCCTCGAGTACAAGATCGGCGAGGGCTGGGGCCCGCTTTGCGAGTTC
CTGGGTGAGGAGGTCCCCGACACTCCTTTCCCCCGCGGTAACGACATGGC
CGACTTCTTCAAGCGCTGCCGCGGCCGCAACAGGCGCCAGATGCTGAACG
CCGCTCTGCAGGCTGTCACTATGGGTGGTGCTCTGCTGGCGACGGGCTTG
GTTGCCACCATGGCCTTCAAGCGTTTCTCTCGGTAGGCCGTCTGTGACTG
GCCTGCCTGTGCCTTTGCTAAGGAGCTGATCGAAGCCTACCCCAACGCCA
AGGTCATTCTGACCACCCGTGATGTTGAATCGTGGCATGCCCCTCCGCAT
TGCCCTCGAACGTCTGGGCTACGTCAAGACCTACCACATGATGTCCGCCA
GTATGGAGAACCCTCCCGACTGCTTGATGTGGCACGATGCTCTCGCTGCC
AAGTACGACGGTGTCGGCGAGTTCGGTAGAAAGGAGTGGGATCAGCTTCT
GGGAGACTGCCAGATGTCTTTGATTCACGCCGACAACTTGGCTCCTCAGC
CTATCACTGATATCTTCACCGATGACACCTGCATCGACCGCCGCAAGTGC
CACCGCACCGTTCCCATGAAGGTGCTGGCTCTGGGTGTGGGAAGAACCGG
AACTGCTTTTCCGTCATGAAGACCGTTTGGTGGCGTGTCTCCGACCCCGA
GCACAAGTTCGTTTCGAACTTCAGCTGGGCCGCTAGCATGTACTACCCCA
TGCTCAACAAGTTCTTCCAGACCTTCTTCCGCGGCGACTTCCCCAACAAG
GGCAAGCAGGTCTACCTTGACCACGTTGAGGAGGTCCGCAGCCTCGTTCC
TCCTGAGAGGCTCCTCGAGTACAAGATCGGCGAGGGCTGGGGCCCGCTTT
GCGAGTTCCTGGGTGAGGAGGTCCCCGACACTCCTTTCCCCCGCGGTAAC
GACATGGCCGACTTCTTCAAGCGCTGCCGCGGCCGCAACAGGCGCCAGAT
GCTGAACGCCGCTCTGCAGGCTGTCACTATGGGTGGTGCTCTGCTGGCGA
CGGGCTTGGTTGCCACCATGGCCTTCAAGCGTTTCTCTCGGTAGGCCGTC
TGTGACTGGCCTGCCTGTGCCTTTGCTAAGGAGCTGATCGAAGCCTACCC
CAACGCCAAGGTCATTCTGACCACCCGTGATGTTGAATCGTGGCATGCCC
CTCCGCATTGCCCTCGAACGTCTGGGCTACGTCAAGACCTACCACATGAT
GTCCGCCAGTATGGAGAACCCTCCCGACTGCTTGATGTGGCACGATGCTC
TCGCTGCCAAGTACGACGGTGTCGGCGAGTTCGGTAGAAAGGAGTGGGAT
CAGCTTCTGGGAGACTGCCAGATGTCTTTGATTCACGCCGACAACTTGGC
TCCTCAGCCTATCACTGATATCTTCACCGATGACACCTGCATCGACCGCC
GCAAGTGCCACCGCACCGTTCCCATGAAGGTGCTGGCTCTGGGTGTGGGA
AGAACCGGAACTGCTTTTCCGTCATGAAGACCGTTTGGTGGCGTGTCTCC
GACCCCGAGCACAAGTTCGTTTCGAACTTCAGCTGGGCCGCTAGCATGTA
CTACCCCATGCTCAACAAGTTCTTCCAGACCTTCTTCCGCGGCGACTTCC
CCAACAAGGGCAAGCAGGTCTACCTTGACCACGTTGAGGAGGTCCGCAGC
CTCGTTCCTCCTGAGAGGCTCCTCGAGTACAAGATCGGCGAGGGCTGGGG
CCCGCTTTGCGAGTTCCTGGGTGAGGAGGTCCCCGACACTCCTTTCCCCC
GCGGTAACGACATGGCCGACTTCTTCAAGCGCTGCCGCGGCCGCAACAGG
CGCCAGATGCTGAACGCCGCTCTGCAGGCTGTCACTATGGGTGGTGCTCT
GCTGGCGACGGGCTTGGTTGCCACCATGGCCTTCAAGCGTTTCTCTCGGT
AGGCCGTCTGTGACTGGCCTGCCTGTGCCTTTGCTAAGGAGCTGATCGAA
GCCTACCCCAACGCCAAGGTCATTCTGACCACCCGTGATGTTGAATCGTG
GCATGCCCCTCCGCATTGCCCTCGAACGTCTGGGCTACGTCAAGACCTAC
CACATGATGTCCGCCAGTATGGAGAACCCTCCCGACTGCTTGATGTGGCA
CGATGCTCTCGCTGCCAAGTACGACGGTGTCGGCGAGTTCGGTAGAAAGG
AGTGGGATCAGCTTCTGGGAGACTGCCAGATGTCTTTGATTCACGCCGAC
AACTTGGCTCCTCAGCCTATCACTGATATCTTCACCGATGACACCTGCAT
CGACCGCCGCAAGTGCCACCGCACCGTTCCCATGAAGGTGCTGGCTCTGG
GTGTGGGAAGAACCGGAACTGCTTTTCCGTCATGAAGACCGTTTGGTGGC
GTGTCTCCGACCCCGAGCACAAGTTCGTTTCGAACTTCAGCTGGGCCGCT
AGCATGTACTACCCCATGCTCAACAAGTTCTTCCAGACCTTCTTCCGCGG
CGACTTCCCCAACAAGGGCAAGCAGGTCTACCTTGACCACGTTGAGGAGG
TCCGCAGCCTCGTTCCTCCTGAGAGGCTCCTCGAGTACAAGATCGGCGAG
GGCTGGGGCCCGCTTTGCGAGTTCCTGGGTGAGGAGGTCCCCGACACTCC
TTTCCCCCGCGGTAACGACATGGCCGACTTCTTCAAGCGCTGCCGCGGCC
GCAACAGGCGCCAGATGCTGAACGCCGCTCTGCAGGCTGTCACTATGGGT
GGTGCTCTGCTGGCGACGGGCTTGGTTGCCACCATGGCCTTCAAGCGTTT
CTCTCGGTAGGCCGTCTGTGACTGGCCTGCCTGTGCCTTTGCTAAGGAGC
TGATCGAAGCCTACCCCAACGCCAAGGTCATTCTGACCACCCGTGATGTT
GAATCGTGGCATGCCCCTCCGCATTGCCCTCGAACGTCTGGGCTACGTCA
AGACCTACCACATGATGTCCGCCAGTATGGAGAACCCTCCCGACTGCTTG
ATGTGGCACGATGCTCTCGCTGCCAAGTACGACGGTGTCGGCGAGTTCGG
TAGAAAGGAGTGGGATCAGCTTCTGGGAGACTGCCAGATGTCTTTGATTC
ACGCCGACAACTTGGCTCCTCAGCCTATCACTGATATCTTCACCGATGAC
ACCTGCATCGACCGCCGCAAGTGCCACCGCACCGTTCCCATGAAGGTGCT
GGCTCTGGGTGTGGGAAGAACCGGAACTGCTT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR040632 |
| DBxref | PFAM:PF17784 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:1709118..1710143 - |
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