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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:1715232..1715975- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005501-T1 ID=CBS51388_005501-T1|Name=CBS51388_005501-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=744bp|location=Sequence derived from alignment at An08:1715232..1715975- (Aspergillus niger CBS 513.88)
ATGGTTCTCTCATTCATTCTTGTGCAGAATCGCCAGTAAGTCATACCCCG
CGTTCCCCCGGAATGCCCCATCTCCATGCATGAAATACACCCCCTAACGC
AGGAACAGGGGGAAGACGCGGCTCGCGAAATGGTATGCGCCGTATAGCGT
AAGTGCACCCCTACTTGGATGGAATCGAATGACGGCTAATATTTTTGCTT
TATGATAGGATGAAGAAAAAGTCAAGCTAAAGGGCGAGGTTCGTTATATG
CCCCGGACCACTACTATCTACTACTACGGCACCCCGCCGCGGAACGACAT
AATAATGTATGCTGGATAGGTACATCGCCTGGTCGCCCCGCGAGATCAGA
AATACCAGTCCAATTTCGTCGAATTCAAGCGGAGTACCAAGGTTGTCTAC
CGGAGATATGCGGGGTTGTTCTTCTGCGCCTGCGTCGACGCAACCGACAA
CGAACTAGCCTACCTCGAGGCGATCCACTTCTTCGTCGAGGTGTTGGATC
AGTTCTTTGGAAACGTTTGTGAGCTGGACTTGGTGTTCAATTTCTACAAA
GTGAGTGATGCTAGAGGCTGGTGGAGTGGTGCCACCGGAATTGTTTGGAA
TGGGAAAATAGGTAGCAGACGGATGAGCTGATGGTTGTGCAGGTATACGC
TATTCTGGACGAGGTGTTCCTTGCAGGAGAGATCGAAGAAACAAGCAAGC
AGGTCGTGTTGACGAGGTTGGAACACTTGGATAAGCTGGAATGA back to topCoding sequence (CDS) from alignment at An08:1715232..1715975- >CBS51388_005501-T1 ID=CBS51388_005501-T1|Name=CBS51388_005501-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2190bp|location=Sequence derived from alignment at An08:1715232..1715975- (Aspergillus niger CBS 513.88)
GTATACGCTATTCTGGACGAGGTGTTCCTTGCAGGAGAGATCGAAGAAAC
AAGCAAGCAGGTCGTGTTGACGAGGTTGGAACACTTGGATAAGCTGGAAT
GAGTACATCGCCTGGTCGCCCCGCGAGATCAGAAATACCAGTCCAATTTC
GTCGAATTCAAGCGGAGTACCAAGGTTGTCTACCGGAGATATGCGGGGTT
GTTCTTCTGCGCCTGCGTCGACGCAACCGACAACGAACTAGCCTACCTCG
AGGCGATCCACTTCTTCGTCGAGGTGTTGGATCAGTTCTTTGGAAACGTT
TGTGAGCTGGACTTGGTGTTCAATTTCTACAAAGATGAAGAAAAAGTCAA
GCTAAAGGGCGAGGGGGAAGACGCGGCTCGCGAAATGGTATGCGCCGTAT
AGCATGGTTCTCTCATTCATTCTTGTGCAGAATCGCCAGTATACGCTATT
CTGGACGAGGTGTTCCTTGCAGGAGAGATCGAAGAAACAAGCAAGCAGGT
CGTGTTGACGAGGTTGGAACACTTGGATAAGCTGGAATGAGTACATCGCC
TGGTCGCCCCGCGAGATCAGAAATACCAGTCCAATTTCGTCGAATTCAAG
CGGAGTACCAAGGTTGTCTACCGGAGATATGCGGGGTTGTTCTTCTGCGC
CTGCGTCGACGCAACCGACAACGAACTAGCCTACCTCGAGGCGATCCACT
TCTTCGTCGAGGTGTTGGATCAGTTCTTTGGAAACGTTTGTGAGCTGGAC
TTGGTGTTCAATTTCTACAAAGATGAAGAAAAAGTCAAGCTAAAGGGCGA
GGGGGAAGACGCGGCTCGCGAAATGGTATGCGCCGTATAGCATGGTTCTC
TCATTCATTCTTGTGCAGAATCGCCAGTATACGCTATTCTGGACGAGGTG
TTCCTTGCAGGAGAGATCGAAGAAACAAGCAAGCAGGTCGTGTTGACGAG
GTTGGAACACTTGGATAAGCTGGAATGAGTACATCGCCTGGTCGCCCCGC
GAGATCAGAAATACCAGTCCAATTTCGTCGAATTCAAGCGGAGTACCAAG
GTTGTCTACCGGAGATATGCGGGGTTGTTCTTCTGCGCCTGCGTCGACGC
AACCGACAACGAACTAGCCTACCTCGAGGCGATCCACTTCTTCGTCGAGG
TGTTGGATCAGTTCTTTGGAAACGTTTGTGAGCTGGACTTGGTGTTCAAT
TTCTACAAAGATGAAGAAAAAGTCAAGCTAAAGGGCGAGGGGGAAGACGC
GGCTCGCGAAATGGTATGCGCCGTATAGCATGGTTCTCTCATTCATTCTT
GTGCAGAATCGCCAGTATACGCTATTCTGGACGAGGTGTTCCTTGCAGGA
GAGATCGAAGAAACAAGCAAGCAGGTCGTGTTGACGAGGTTGGAACACTT
GGATAAGCTGGAATGAGTACATCGCCTGGTCGCCCCGCGAGATCAGAAAT
ACCAGTCCAATTTCGTCGAATTCAAGCGGAGTACCAAGGTTGTCTACCGG
AGATATGCGGGGTTGTTCTTCTGCGCCTGCGTCGACGCAACCGACAACGA
ACTAGCCTACCTCGAGGCGATCCACTTCTTCGTCGAGGTGTTGGATCAGT
TCTTTGGAAACGTTTGTGAGCTGGACTTGGTGTTCAATTTCTACAAAGAT
GAAGAAAAAGTCAAGCTAAAGGGCGAGGGGGAAGACGCGGCTCGCGAAAT
GGTATGCGCCGTATAGCATGGTTCTCTCATTCATTCTTGTGCAGAATCGC
CAGTATACGCTATTCTGGACGAGGTGTTCCTTGCAGGAGAGATCGAAGAA
ACAAGCAAGCAGGTCGTGTTGACGAGGTTGGAACACTTGGATAAGCTGGA
ATGAGTACATCGCCTGGTCGCCCCGCGAGATCAGAAATACCAGTCCAATT
TCGTCGAATTCAAGCGGAGTACCAAGGTTGTCTACCGGAGATATGCGGGG
TTGTTCTTCTGCGCCTGCGTCGACGCAACCGACAACGAACTAGCCTACCT
CGAGGCGATCCACTTCTTCGTCGAGGTGTTGGATCAGTTCTTTGGAAACG
TTTGTGAGCTGGACTTGGTGTTCAATTTCTACAAAGATGAAGAAAAAGTC
AAGCTAAAGGGCGAGGGGGAAGACGCGGCTCGCGAAATGGTATGCGCCGT
ATAGCATGGTTCTCTCATTCATTCTTGTGCAGAATCGCCA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0015031 | protein transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011012 |
| DBxref | InterPro:IPR022775 |
| DBxref | InterPro:IPR016635 |
| DBxref | PFAM:PF01217 |
| Product | AP-2 complex subunit sigma |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:1715232..1715975 - |
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