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CBS51388_005504-T1, CBS51388_005504-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005504-T1
Unique NameCBS51388_005504-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:1719398..1720642+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005504-T1 ID=CBS51388_005504-T1|Name=CBS51388_005504-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1245bp|location=Sequence derived from alignment at An08:1719398..1720642+ (Aspergillus niger CBS 513.88)
ATGTCTGCGGATCCATACGATTCGGATGCTACTATCTCATGGCATGGATG
GGACCATCTGGAAGACGGTCAGATGACGACTGCACCACCGGTGCCAGTAG
TCCCAGCAGTCCCAGCAATCCAGCAGCAGCCACACGATGAACCGTTGGAC
ATGTACATGGGAATGGATACGGAGACCAAAGAGATCTTCAAAGAAATGCT
AATTGATTTCGCTCGCAAGATGATGTTCGTCTCTGGTGAAACTGCCGAAC
CGTCCGTTGAAACCACGACTCTCATTGAAGATATTGTACGCCAGCAGGTT
GTAGAAATTGTATGCTCCCTTCTCTCCTCTTGCGAACTACGCTAACTTCT
GCAGCTCGCGCGAAGCACTGCCCTAGCGACTCGTCGCGGCGTGCGCTCGA
TCTCTACTGATGACTTGATCTTTCTCATTCGCCATGACAAGGCCAAGGTG
TCGCGTCTCAAGACGTTCCTGTCCTGGAAGGATGTCCGCAAGAACGTCAA
AGACTCCGACGACAAAGGCGGCGCCGATGCTGCAGACTTTGCAGGAGCTG
ATGACCCTATTGCCGGCGGAGTCGTCGCAGGGCCGCAGGATGTTGCGTCG
AAGCCGAAGAATAAGCGTGCTCGTGTGGGTCTCGCCTGGGACGTAAACAG
CTTTTACTCCGTGCAGGTTCCTGAACGTGAGGACGAAGAAGACGAGGAAG
AGGAGGAACAGAACTACGCTACGCTACAGCGCCTTGCCGCAGCCGACGAA
CGTACCAAGAACATGACCAAGGAAGAGTACGTCTTCTGGTCAGAATGTCG
CCAGGCGTCGTTCACCTACCGCAAGAGCAAACGGTTCCGCGAGTGGGCCG
GATTCGGTATCGTGACTGAGTCCAAGCCAAACGACGATATTGTTGATATT
CTCGGATTCTTGACATTCGAAATCGTGCAGACTCTGACTGAGGAGGCACT
CAAGGTCAAGGAGCGGGAGGATCGCGAGAAGAACCGTCGTGGAGGTGGAG
AGAACGGCGAGAGCAGTAAGAAACGTACGCGCGAGACTGGATTATTCGAT
CCCCCTGAGGAGGGTCGTACCCCGGTTGAGACCAGACATATTCGCGAAGC
GTATCGCAAGCTGCAGGCGACTCCTAATAAGAATATTGCCATGTTGCTGC
ATAATGGACGCCTGCCAGCTAAGATGCCATTGCGATTGGTAGGTTCTTAC
CTCATCCTTGAATTGGTGGTTAGGTGCTAACTATGACAGATTTGA
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Coding sequence (CDS) from alignment at An08:1719398..1720642+

>CBS51388_005504-T1 ID=CBS51388_005504-T1|Name=CBS51388_005504-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3447bp|location=Sequence derived from alignment at An08:1719398..1720642+ (Aspergillus niger CBS 513.88)
ATGTCTGCGGATCCATACGATTCGGATGCTACTATCTCATGGCATGGATG
GGACCATCTGGAAGACGGTCAGATGACGACTGCACCACCGGTGCCAGTAG
TCCCAGCAGTCCCAGCAATCCAGCAGCAGCCACACGATGAACCGTTGGAC
ATGTACATGGGAATGGATACGGAGACCAAAGAGATCTTCAAAGAAATGCT
AATTGATTTCGCTCGCAAGATGATGTTCGTCTCTGGTGAAACTGCCGAAC
CGTCCGTTGAAACCACGACTCTCATTGAAGATATTGTACGCCAGCAGGTT
GTAGAAATTCTCGCGCGAAGCACTGCCCTAGCGACTCGTCGCGGCGTGCG
CTCGATCTCTACTGATGACTTGATCTTTCTCATTCGCCATGACAAGGCCA
AGGTGTCGCGTCTCAAGACGTTCCTGTCCTGGAAGGATGTCCGCAAGAAC
GTCAAAGACTCCGACGACAAAGGCGGCGCCGATGCTGCAGACTTTGCAGG
AGCTGATGACCCTATTGCCGGCGGAGTCGTCGCAGGGCCGCAGGATGTTG
CGTCGAAGCCGAAGAATAAGCGTGCTCGTGTGGGTCTCGCCTGGGACGTA
AACAGCTTTTACTCCGTGCAGGTTCCTGAACGTGAGGACGAAGAAGACGA
GGAAGAGGAGGAACAGAACTACGCTACGCTACAGCGCCTTGCCGCAGCCG
ACGAACGTACCAAGAACATGACCAAGGAAGAGTACGTCTTCTGGTCAGAA
TGTCGCCAGGCGTCGTTCACCTACCGCAAGAGCAAACGGTTCCGCGAGTG
GGCCGGATTCGGTATCGTGACTGAGTCCAAGCCAAACGACGATATTGTTG
ATATTCTCGGATTCTTGACATTCGAAATCGTGCAGACTCTGACTGAGGAG
GCACTCAAGGTCAAGGAGCGGGAGGATCGCGAGAAGAACCGTCGTGGAGG
TGGAGAGAACGGCGAGAGCAGTAAGAAACGTACGCGCGAGACTGGATTAT
TCGATCCCCCTGAGGAGGGTCGTACCCCGGTTGAGACCAGACATATTCGC
GAAGCGTATCGCAAGCTGCAGGCGACTCCTAATAAGAATATTGCCATGTT
GCTGCATAATGGACGCCTGCCAGCTAAGATGCCATTGCGATTGATTTGAA
TGTCTGCGGATCCATACGATTCGGATGCTACTATCTCATGGCATGGATGG
GACCATCTGGAAGACGGTCAGATGACGACTGCACCACCGGTGCCAGTAGT
CCCAGCAGTCCCAGCAATCCAGCAGCAGCCACACGATGAACCGTTGGACA
TGTACATGGGAATGGATACGGAGACCAAAGAGATCTTCAAAGAAATGCTA
ATTGATTTCGCTCGCAAGATGATGTTCGTCTCTGGTGAAACTGCCGAACC
GTCCGTTGAAACCACGACTCTCATTGAAGATATTGTACGCCAGCAGGTTG
TAGAAATTCTCGCGCGAAGCACTGCCCTAGCGACTCGTCGCGGCGTGCGC
TCGATCTCTACTGATGACTTGATCTTTCTCATTCGCCATGACAAGGCCAA
GGTGTCGCGTCTCAAGACGTTCCTGTCCTGGAAGGATGTCCGCAAGAACG
TCAAAGACTCCGACGACAAAGGCGGCGCCGATGCTGCAGACTTTGCAGGA
GCTGATGACCCTATTGCCGGCGGAGTCGTCGCAGGGCCGCAGGATGTTGC
GTCGAAGCCGAAGAATAAGCGTGCTCGTGTGGGTCTCGCCTGGGACGTAA
ACAGCTTTTACTCCGTGCAGGTTCCTGAACGTGAGGACGAAGAAGACGAG
GAAGAGGAGGAACAGAACTACGCTACGCTACAGCGCCTTGCCGCAGCCGA
CGAACGTACCAAGAACATGACCAAGGAAGAGTACGTCTTCTGGTCAGAAT
GTCGCCAGGCGTCGTTCACCTACCGCAAGAGCAAACGGTTCCGCGAGTGG
GCCGGATTCGGTATCGTGACTGAGTCCAAGCCAAACGACGATATTGTTGA
TATTCTCGGATTCTTGACATTCGAAATCGTGCAGACTCTGACTGAGGAGG
CACTCAAGGTCAAGGAGCGGGAGGATCGCGAGAAGAACCGTCGTGGAGGT
GGAGAGAACGGCGAGAGCAGTAAGAAACGTACGCGCGAGACTGGATTATT
CGATCCCCCTGAGGAGGGTCGTACCCCGGTTGAGACCAGACATATTCGCG
AAGCGTATCGCAAGCTGCAGGCGACTCCTAATAAGAATATTGCCATGTTG
CTGCATAATGGACGCCTGCCAGCTAAGATGCCATTGCGATTGATTTGAAT
GTCTGCGGATCCATACGATTCGGATGCTACTATCTCATGGCATGGATGGG
ACCATCTGGAAGACGGTCAGATGACGACTGCACCACCGGTGCCAGTAGTC
CCAGCAGTCCCAGCAATCCAGCAGCAGCCACACGATGAACCGTTGGACAT
GTACATGGGAATGGATACGGAGACCAAAGAGATCTTCAAAGAAATGCTAA
TTGATTTCGCTCGCAAGATGATGTTCGTCTCTGGTGAAACTGCCGAACCG
TCCGTTGAAACCACGACTCTCATTGAAGATATTGTACGCCAGCAGGTTGT
AGAAATTCTCGCGCGAAGCACTGCCCTAGCGACTCGTCGCGGCGTGCGCT
CGATCTCTACTGATGACTTGATCTTTCTCATTCGCCATGACAAGGCCAAG
GTGTCGCGTCTCAAGACGTTCCTGTCCTGGAAGGATGTCCGCAAGAACGT
CAAAGACTCCGACGACAAAGGCGGCGCCGATGCTGCAGACTTTGCAGGAG
CTGATGACCCTATTGCCGGCGGAGTCGTCGCAGGGCCGCAGGATGTTGCG
TCGAAGCCGAAGAATAAGCGTGCTCGTGTGGGTCTCGCCTGGGACGTAAA
CAGCTTTTACTCCGTGCAGGTTCCTGAACGTGAGGACGAAGAAGACGAGG
AAGAGGAGGAACAGAACTACGCTACGCTACAGCGCCTTGCCGCAGCCGAC
GAACGTACCAAGAACATGACCAAGGAAGAGTACGTCTTCTGGTCAGAATG
TCGCCAGGCGTCGTTCACCTACCGCAAGAGCAAACGGTTCCGCGAGTGGG
CCGGATTCGGTATCGTGACTGAGTCCAAGCCAAACGACGATATTGTTGAT
ATTCTCGGATTCTTGACATTCGAAATCGTGCAGACTCTGACTGAGGAGGC
ACTCAAGGTCAAGGAGCGGGAGGATCGCGAGAAGAACCGTCGTGGAGGTG
GAGAGAACGGCGAGAGCAGTAAGAAACGTACGCGCGAGACTGGATTATTC
GATCCCCCTGAGGAGGGTCGTACCCCGGTTGAGACCAGACATATTCGCGA
AGCGTATCGCAAGCTGCAGGCGACTCCTAATAAGAATATTGCCATGTTGC
TGCATAATGGACGCCTGCCAGCTAAGATGCCATTGCGATTGATTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
Vocabulary: Biological Process
TermDefinition
GO:0006366transcription by RNA polymerase II
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005504CBS51388_005504Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005504-T1.exon1CBS51388_005504-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_005504-T1.exon2CBS51388_005504-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_005504-T1.exon3CBS51388_005504-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005504-T1.cdsCBS51388_005504-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005504-T1CBS51388_005504-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR009072
DBxrefInterPro:IPR003195
DBxrefPFAM:PF02269
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:1719398..1720642 +
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