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CBS51388_005548-T1, CBS51388_005548-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005548-T1
Unique NameCBS51388_005548-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:1858123..1860531-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005548-T1 ID=CBS51388_005548-T1|Name=CBS51388_005548-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2409bp|location=Sequence derived from alignment at An08:1858123..1860531- (Aspergillus niger CBS 513.88)
ATGGCTCCGATCAACGGTTCCCGCAATGGCAAACACTCAAAGCCTCAGCG
CGGCGGTAACCTGAAGCGCAAGCGTGTCCAAGAAGATTTGAACTCTCTCA
TCAAGAAGGTCGAGGATCTGGATGTCAAGGAAACCATCGAACAATTTACC
GATCTGCCCTTGTCTGAACCCACCGCGTCCGGACTTGCCTCGTCCCACTA
CAAGACGTTAACCGATATTCAATCCCGTGCGATCAGCCATGCGCTCAAGG
GCCGCGATATTCTCGGTGCCGCAAAGACGGGAAGCGGCAAAACGCTAGCC
TTCCTGATTCCCATCCTGGAAAACCTATACCGCAAACAGTGGTCAGAGCA
CGATGGATTGGGTGCCCTGGTTCTGTCTCCCACCCGCGAACTCGCGATTC
AGATCTTCGAAGTCCTCCGCAAAGTCGGTCGCTATCATACGTTCTCCGCC
GGTCTGGTTATTGGTGGGAAGAGTCTGCGGGAGGAGCAGGAGAGACTGGG
ACGGATGAATATTCTGGTGTGTACGCCTGGACGCATGCTGCAGCACTTGG
ATCAGACTTCTTTCTTCGAGACGCACAACCTGCAGATGCTCGTGTTGGAT
GAGGCGGATCGCATCTTGGATATGGGTTTCCAGAAGACTGTGGACGCTAT
TATCGGCCATCTTCCCAAGGAGCGCCAGACTCTACTTTTCAGTGCCACAC
AGACGAAGAAGGTGTCGGACTTGGCTCGACTGAGCTTGCAGGATCCCGAA
TATGTGGCTGTTCATGAGGCGGCCTCCTCCGCTACGCCGTCCAAGCTTCA
GCAACATTACGTCGTTACGCCCCTCCCGCAGAAACTCGATGTTCTATGGA
GTTTTATTCGGAGCAACCTGAAGTCCAAGACGATCGTTTTCCTGTCATCA
GGAAAGCAGGTGCGTTTTGTCTACGAATCCTTCCGTCACATGCAACCCGG
TGTCCCGTTGATGCACCTTCACGGACGTCAGAAGCAGGGTGGTCGACTCG
ATATTACTACCAAGTTCTCCTCGGCCCAACATGCAGTTCTGTTCGCCACC
GATGTTGCTGCGCGTGGTCTGGACTTTCCGGCCGTCGACTGGGTCATCCA
ACTGGACTGTCCTGAAGATGCCGATACCTATATTCACCGTGTTGGTCGTA
CAGCTAGATACGAGCGCGATGGTCGTGCCGTGCTGTTCCTGGATCCTAGT
GAGGAGAAGGGCATGTTGAAGCGTTTGGAGCAGAAGAAGGTCCAGGTCGA
ACGCATCAACGTCAAGGCCAACAAGCAACAGAGCATTAAAGATCAGCTGC
AAAACATGTGCTTCAAGGATCCCGAATTGAAGTATCTGGGCCAGAAGGCC
TTTATTTCCTACGCTAAGTCGGTCTACGTCCAGAAGGACAAGGAGATCTT
CAACATCAAGGAGCTGAAGCTGGATGAATTTGCGGGCAGCTTGGGACTTC
CGGGTGCACCTCGCATCAAGTTCATTAAAGGTGATGATACCAAGGAGCGG
AAGAACGCGCCCCGTGCTACGGCATACCTGTCCAGCGATGACGAGTCTGA
CGAAGAGGGTGAAAAGAAGAAGACTAAGAAGGATGAGACGCAGGTGCGGA
CGAAGTATGACCGCATGTTTGAGCGTCGGAACCAGGACGTGTTGGCCGAC
CATTACCACAAGCTCATTAACGACGACGGCACGATGGTGGAAACTAATAA
GGCTACTGAGGATGCGGATGAAGACGACGACTTCTTGTCCGTCAAGCGTC
GCTACGAGGCCGGTGACAAGGATCTGGATGTCGGAGGATCTAGCTCGGAG
GATGAGGAGGATGCGGACGGAACGGAGAAGAAGGGAGCCAAGGTGGTCCA
TCTCGATGGCAAGGAGGCCCTGGTCATTGACTCGAAACGCCGCGAGAAGC
TGCTCAAGTCGAAGAAGAAGCTTCTCAAGTTCAAGGGCAAGGGCACGAAG
CTTATCTACGATGATGAGGGCAATGCTCACGAGCTGTACGAAATGGAGGA
CGAAGAACAGTTCAAGGCCAAGGGCGACGCCAAGGAGCAGCAGGCGAAGT
TCCTGGCGGAGGAAGCGGAGCGCACTCGGCAAGCGGATTTGGAGGACAAG
GAAGTCGCCAAGCAGAAGAAGCGCGAGAAGAAGGAGAAGCGCAAGGCCCG
CGAGCGCGAGCTTCTTGCCATGGAGGAAGAAGGAGGGGATTTGGTCCAGA
TCCCGTACAAGGAGGGCGGGCTCGCTTCGGACGAAGACGAGGAGGTACTC
CGGCCCAGCAAGAAGGCGCGAGTCTCCTTTGCAGACGAAGCAAGCGAGGA
GGAGCCCAAACCCAAGAAGGCCAAGAAGTCTCAACCAGCTGGCAAAGCAC
CGGAGCAGATCGAGACTCTGGAAGATCTGGAGTCGCTGGCCGCTGGCTTG
CTGGGGTGA
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Coding sequence (CDS) from alignment at An08:1858123..1860531-

>CBS51388_005548-T1 ID=CBS51388_005548-T1|Name=CBS51388_005548-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2409bp|location=Sequence derived from alignment at An08:1858123..1860531- (Aspergillus niger CBS 513.88)
ATGGCTCCGATCAACGGTTCCCGCAATGGCAAACACTCAAAGCCTCAGCG
CGGCGGTAACCTGAAGCGCAAGCGTGTCCAAGAAGATTTGAACTCTCTCA
TCAAGAAGGTCGAGGATCTGGATGTCAAGGAAACCATCGAACAATTTACC
GATCTGCCCTTGTCTGAACCCACCGCGTCCGGACTTGCCTCGTCCCACTA
CAAGACGTTAACCGATATTCAATCCCGTGCGATCAGCCATGCGCTCAAGG
GCCGCGATATTCTCGGTGCCGCAAAGACGGGAAGCGGCAAAACGCTAGCC
TTCCTGATTCCCATCCTGGAAAACCTATACCGCAAACAGTGGTCAGAGCA
CGATGGATTGGGTGCCCTGGTTCTGTCTCCCACCCGCGAACTCGCGATTC
AGATCTTCGAAGTCCTCCGCAAAGTCGGTCGCTATCATACGTTCTCCGCC
GGTCTGGTTATTGGTGGGAAGAGTCTGCGGGAGGAGCAGGAGAGACTGGG
ACGGATGAATATTCTGGTGTGTACGCCTGGACGCATGCTGCAGCACTTGG
ATCAGACTTCTTTCTTCGAGACGCACAACCTGCAGATGCTCGTGTTGGAT
GAGGCGGATCGCATCTTGGATATGGGTTTCCAGAAGACTGTGGACGCTAT
TATCGGCCATCTTCCCAAGGAGCGCCAGACTCTACTTTTCAGTGCCACAC
AGACGAAGAAGGTGTCGGACTTGGCTCGACTGAGCTTGCAGGATCCCGAA
TATGTGGCTGTTCATGAGGCGGCCTCCTCCGCTACGCCGTCCAAGCTTCA
GCAACATTACGTCGTTACGCCCCTCCCGCAGAAACTCGATGTTCTATGGA
GTTTTATTCGGAGCAACCTGAAGTCCAAGACGATCGTTTTCCTGTCATCA
GGAAAGCAGGTGCGTTTTGTCTACGAATCCTTCCGTCACATGCAACCCGG
TGTCCCGTTGATGCACCTTCACGGACGTCAGAAGCAGGGTGGTCGACTCG
ATATTACTACCAAGTTCTCCTCGGCCCAACATGCAGTTCTGTTCGCCACC
GATGTTGCTGCGCGTGGTCTGGACTTTCCGGCCGTCGACTGGGTCATCCA
ACTGGACTGTCCTGAAGATGCCGATACCTATATTCACCGTGTTGGTCGTA
CAGCTAGATACGAGCGCGATGGTCGTGCCGTGCTGTTCCTGGATCCTAGT
GAGGAGAAGGGCATGTTGAAGCGTTTGGAGCAGAAGAAGGTCCAGGTCGA
ACGCATCAACGTCAAGGCCAACAAGCAACAGAGCATTAAAGATCAGCTGC
AAAACATGTGCTTCAAGGATCCCGAATTGAAGTATCTGGGCCAGAAGGCC
TTTATTTCCTACGCTAAGTCGGTCTACGTCCAGAAGGACAAGGAGATCTT
CAACATCAAGGAGCTGAAGCTGGATGAATTTGCGGGCAGCTTGGGACTTC
CGGGTGCACCTCGCATCAAGTTCATTAAAGGTGATGATACCAAGGAGCGG
AAGAACGCGCCCCGTGCTACGGCATACCTGTCCAGCGATGACGAGTCTGA
CGAAGAGGGTGAAAAGAAGAAGACTAAGAAGGATGAGACGCAGGTGCGGA
CGAAGTATGACCGCATGTTTGAGCGTCGGAACCAGGACGTGTTGGCCGAC
CATTACCACAAGCTCATTAACGACGACGGCACGATGGTGGAAACTAATAA
GGCTACTGAGGATGCGGATGAAGACGACGACTTCTTGTCCGTCAAGCGTC
GCTACGAGGCCGGTGACAAGGATCTGGATGTCGGAGGATCTAGCTCGGAG
GATGAGGAGGATGCGGACGGAACGGAGAAGAAGGGAGCCAAGGTGGTCCA
TCTCGATGGCAAGGAGGCCCTGGTCATTGACTCGAAACGCCGCGAGAAGC
TGCTCAAGTCGAAGAAGAAGCTTCTCAAGTTCAAGGGCAAGGGCACGAAG
CTTATCTACGATGATGAGGGCAATGCTCACGAGCTGTACGAAATGGAGGA
CGAAGAACAGTTCAAGGCCAAGGGCGACGCCAAGGAGCAGCAGGCGAAGT
TCCTGGCGGAGGAAGCGGAGCGCACTCGGCAAGCGGATTTGGAGGACAAG
GAAGTCGCCAAGCAGAAGAAGCGCGAGAAGAAGGAGAAGCGCAAGGCCCG
CGAGCGCGAGCTTCTTGCCATGGAGGAAGAAGGAGGGGATTTGGTCCAGA
TCCCGTACAAGGAGGGCGGGCTCGCTTCGGACGAAGACGAGGAGGTACTC
CGGCCCAGCAAGAAGGCGCGAGTCTCCTTTGCAGACGAAGCAAGCGAGGA
GGAGCCCAAACCCAAGAAGGCCAAGAAGTCTCAACCAGCTGGCAAAGCAC
CGGAGCAGATCGAGACTCTGGAAGATCTGGAGTCGCTGGCCGCTGGCTTG
CTGGGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DBP4CBS51388_005548Aspergillus niger CBS 513.88gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005548-T1.cdsCBS51388_005548-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005548-T1.exon1CBS51388_005548-T1.exon1Aspergillus niger CBS 513.88exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005548-T1CBS51388_005548-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09260YMF
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR014014
DBxrefInterPro:IPR000629
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR025313
DBxrefInterPro:IPR001650
DBxrefInterPro:IPR014001
DBxrefPFAM:PF04851
DBxrefPFAM:PF00271
DBxrefPFAM:PF13959
DBxrefPFAM:PF00270
ProductATP-dependent RNA helicase dbp4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:1858123..1860531 -
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