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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:1893503..1895676- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005559-T1 ID=CBS51388_005559-T1|Name=CBS51388_005559-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2174bp|location=Sequence derived from alignment at An08:1893503..1895676- (Aspergillus niger CBS 513.88)
ATGCCTCTGCAAGCACTTGCGGAAGGGGACCGTACTGCTATATTTCCACA
CTCCCCCATGAGCAATGACGAAAACAATGCCTTTAGTCCTAAAACAAGGC
AAGCCTCGGGCTTCCGAAATTCGAGAGGAAGCCAAAGCCGAATCACCGCA
ATGGGTATAACACCCGACGGACTCTTCGGTTTGTCAGAGAATGAGGACGA
GTTCTTCGGTGACTCTTCGGTCGCCTCTTTTCTGAAGCAAATCAAAGATT
CTGCAACGAAAGAGCCTGAACGAGGAAGCTCGACAACATATCCGATTCCG
CGTGCGACTTCTGGCACAACATCAATTGCCATGCCACCGGTGGCTGAGAA
TGGTCCGAGTGTCAAAGCCTACGATCTACCACCACGGCAACTAGCTGACT
ACCTTTTAAACCTTTATTTCGAAAAAATACACAGCCTGTATCCATACGTC
CATAAGACAAGCTTCCTTCGTGCTTATGGACGCCTATGGATGCCACTGGC
AGAGACAGACGCGGAGACCATCTTGTCTGGGCTGGGCTTAGGAGATGCAT
GCGTGTCCCTGCCACTCTTCCATTGTGCATTGAACATTATCTTTGCTTTA
GGGTGCCACTTCTCCAAATTAGATCAAACGGCGCGGGAAGCTACGGCAGA
AGAGTTCTTTCAGCGCTCGCAGCGACTACTGAACATGATATCACTTGATA
AAGGTGATTTAGCCCTAGTACAAACATTACTCCTGACATCACAATACTTG
CAAGGAGGCGAGTCCCCATCGAGATGTTGGAATATTATTGGTCTTGCTTG
CAGAATTGCACAGTCACTTGGAATGCATTCTCTTAAGGCAGATAGGGCCA
GAACTCCAGCCCAAATACAGATGAGAAGGCGCGTCTGGCATGGATGTGTA
ATGCTTGATCTGTGAGTGCTTCAGATTATGGATCGTTTTTATTACTAACA
GAATCCCAAGAGCAAGTAGTATGATGTTGGGTCGACCTCCCATGACTCAT
TCTTCCGCAGTACCTCTTCCAGAAGCTATCGATGATGAATATCTCGATTC
AAGCATGGCAACATGTCAACCATCAACGGAAACGCTTTCAGGAACTGAAT
TCTATGTCAGAACTCTACAGCTATACAAAATACTACGAAAGATTCTATCC
GAGGTCTATGAACCTTGGGAGGACGAGAGGGCTCCTGATCAGTCAGAGCG
GCCAAAGTCTGAAAACGAGCTAGCCCAGACATTGCTAAGTTTGGATGAGG
AGCTTCTGGCGTTTGAATCAAACCTTCCAGTGGCTCTACAATGGCGTGAT
GCACAGCAGCCCGCGGATGTGGCTGGACCATTCCGTCGTGAGAGCAGTCT
GTTGAGGGGAAGGTACATACTCCTGCGATACATTCGTTGAAAGGTCACTA
AGCTTTCGCCCCAGGTTCCTTCATTTGAGAATATTGCTCCTTCGTCCTAC
GCTTGTCAAGTTTTGCCGTAACGGTTTCCCACCGCGTCAAGCGGGTGGCT
ACCCTCGATACCAACAAGTATTATCAAAAAGCAGAATATCCGTGGATTTC
AGTATCAGCTGCTCGACATCATGTGTTGAAACTGCGATTGAGCTGTCGCA
CCTTATGAATGATATTTCAACGACTGAATTAGCAAGTGTGTGGTGGTACA
ATGTCTTTTGTATGTTCTTCCCGTGACTAGTATGAAGTGACGGCCGCTGA
ACTCAACCACTAGATGCTTTTACCGCTGGTGTTGTTCTCATACTGGCTCA
GGCGTCTCCTGCTATGACGTCCAAATTTTCTCAGCCAGTCTTGGAGAATG
CTTGGAAAAGCTGTTGTGACTGCTTGGAAAACATGAACCCGTACAGCAAC
ACGGCCAGAAACTGCGCCACAAATTTGCGGAAGACTCTATCTCAAGTTCT
AGACGGCCAAGGACAAGAATCTAGAGTGCTTGCCAATAAACCTGTGCCTC
AGAGTACAGGGCAATATCTGGGCCGAGACACAAGTTTACCTAGGGCACCG
AACTACCTTTCGACTCTCGCTGGATCAGAAGTTGGCGATGATTCCACCCA
AGGCGCCCTGGATACTCAATTTTCTGAGGCATTGGACTCTCTCTGGAGTG
GAGATGATGTAAACAGTTCTTTGATGGAGATGCTATGGGTTGACCTTTGG
TTGACAGCACCATCATTTTTCTAA back to topCoding sequence (CDS) from alignment at An08:1893503..1895676- >CBS51388_005559-T1 ID=CBS51388_005559-T1|Name=CBS51388_005559-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=8112bp|location=Sequence derived from alignment at An08:1893503..1895676- (Aspergillus niger CBS 513.88)
ATGCTTTTACCGCTGGTGTTGTTCTCATACTGGCTCAGGCGTCTCCTGCT
ATGACGTCCAAATTTTCTCAGCCAGTCTTGGAGAATGCTTGGAAAAGCTG
TTGTGACTGCTTGGAAAACATGAACCCGTACAGCAACACGGCCAGAAACT
GCGCCACAAATTTGCGGAAGACTCTATCTCAAGTTCTAGACGGCCAAGGA
CAAGAATCTAGAGTGCTTGCCAATAAACCTGTGCCTCAGAGTACAGGGCA
ATATCTGGGCCGAGACACAAGTTTACCTAGGGCACCGAACTACCTTTCGA
CTCTCGCTGGATCAGAAGTTGGCGATGATTCCACCCAAGGCGCCCTGGAT
ACTCAATTTTCTGAGGCATTGGACTCTCTCTGGAGTGGAGATGATGTAAA
CAGTTCTTTGATGGAGATGCTATGGGTTGACCTTTGGTTGACAGCACCAT
CATTTTTCTAAGTTCCTTCATTTGAGAATATTGCTCCTTCGTCCTACGCT
TGTCAAGTTTTGCCGTAACGGTTTCCCACCGCGTCAAGCGGGTGGCTACC
CTCGATACCAACAAGTATTATCAAAAAGCAGAATATCCGTGGATTTCAGT
ATCAGCTGCTCGACATCATGTGTTGAAACTGCGATTGAGCTGTCGCACCT
TATGAATGATATTTCAACGACTGAATTAGCAAGTGTGTGGTGGTACAATG
TCTTTTAATCCCAAGAGCAAGTAGTATGATGTTGGGTCGACCTCCCATGA
CTCATTCTTCCGCAGTACCTCTTCCAGAAGCTATCGATGATGAATATCTC
GATTCAAGCATGGCAACATGTCAACCATCAACGGAAACGCTTTCAGGAAC
TGAATTCTATGTCAGAACTCTACAGCTATACAAAATACTACGAAAGATTC
TATCCGAGGTCTATGAACCTTGGGAGGACGAGAGGGCTCCTGATCAGTCA
GAGCGGCCAAAGTCTGAAAACGAGCTAGCCCAGACATTGCTAAGTTTGGA
TGAGGAGCTTCTGGCGTTTGAATCAAACCTTCCAGTGGCTCTACAATGGC
GTGATGCACAGCAGCCCGCGGATGTGGCTGGACCATTCCGTCGTGAGAGC
AGTCTGTTGAGGGGAAGATGCCTCTGCAAGCACTTGCGGAAGGGGACCGT
ACTGCTATATTTCCACACTCCCCCATGAGCAATGACGAAAACAATGCCTT
TAGTCCTAAAACAAGGCAAGCCTCGGGCTTCCGAAATTCGAGAGGAAGCC
AAAGCCGAATCACCGCAATGGGTATAACACCCGACGGACTCTTCGGTTTG
TCAGAGAATGAGGACGAGTTCTTCGGTGACTCTTCGGTCGCCTCTTTTCT
GAAGCAAATCAAAGATTCTGCAACGAAAGAGCCTGAACGAGGAAGCTCGA
CAACATATCCGATTCCGCGTGCGACTTCTGGCACAACATCAATTGCCATG
CCACCGGTGGCTGAGAATGGTCCGAGTGTCAAAGCCTACGATCTACCACC
ACGGCAACTAGCTGACTACCTTTTAAACCTTTATTTCGAAAAAATACACA
GCCTGTATCCATACGTCCATAAGACAAGCTTCCTTCGTGCTTATGGACGC
CTATGGATGCCACTGGCAGAGACAGACGCGGAGACCATCTTGTCTGGGCT
GGGCTTAGGAGATGCATGCGTGTCCCTGCCACTCTTCCATTGTGCATTGA
ACATTATCTTTGCTTTAGGGTGCCACTTCTCCAAATTAGATCAAACGGCG
CGGGAAGCTACGGCAGAAGAGTTCTTTCAGCGCTCGCAGCGACTACTGAA
CATGATATCACTTGATAAAGGTGATTTAGCCCTAGTACAAACATTACTCC
TGACATCACAATACTTGCAAGGAGGCGAGTCCCCATCGAGATGTTGGAAT
ATTATTGGTCTTGCTTGCAGAATTGCACAGTCACTTGGAATGCATTCTCT
TAAGGCAGATAGGGCCAGAACTCCAGCCCAAATACAGATGAGAAGGCGCG
TCTGGCATGGATGTGTAATGCTTGATCTATGCTTTTACCGCTGGTGTTGT
TCTCATACTGGCTCAGGCGTCTCCTGCTATGACGTCCAAATTTTCTCAGC
CAGTCTTGGAGAATGCTTGGAAAAGCTGTTGTGACTGCTTGGAAAACATG
AACCCGTACAGCAACACGGCCAGAAACTGCGCCACAAATTTGCGGAAGAC
TCTATCTCAAGTTCTAGACGGCCAAGGACAAGAATCTAGAGTGCTTGCCA
ATAAACCTGTGCCTCAGAGTACAGGGCAATATCTGGGCCGAGACACAAGT
TTACCTAGGGCACCGAACTACCTTTCGACTCTCGCTGGATCAGAAGTTGG
CGATGATTCCACCCAAGGCGCCCTGGATACTCAATTTTCTGAGGCATTGG
ACTCTCTCTGGAGTGGAGATGATGTAAACAGTTCTTTGATGGAGATGCTA
TGGGTTGACCTTTGGTTGACAGCACCATCATTTTTCTAAGTTCCTTCATT
TGAGAATATTGCTCCTTCGTCCTACGCTTGTCAAGTTTTGCCGTAACGGT
TTCCCACCGCGTCAAGCGGGTGGCTACCCTCGATACCAACAAGTATTATC
AAAAAGCAGAATATCCGTGGATTTCAGTATCAGCTGCTCGACATCATGTG
TTGAAACTGCGATTGAGCTGTCGCACCTTATGAATGATATTTCAACGACT
GAATTAGCAAGTGTGTGGTGGTACAATGTCTTTTAATCCCAAGAGCAAGT
AGTATGATGTTGGGTCGACCTCCCATGACTCATTCTTCCGCAGTACCTCT
TCCAGAAGCTATCGATGATGAATATCTCGATTCAAGCATGGCAACATGTC
AACCATCAACGGAAACGCTTTCAGGAACTGAATTCTATGTCAGAACTCTA
CAGCTATACAAAATACTACGAAAGATTCTATCCGAGGTCTATGAACCTTG
GGAGGACGAGAGGGCTCCTGATCAGTCAGAGCGGCCAAAGTCTGAAAACG
AGCTAGCCCAGACATTGCTAAGTTTGGATGAGGAGCTTCTGGCGTTTGAA
TCAAACCTTCCAGTGGCTCTACAATGGCGTGATGCACAGCAGCCCGCGGA
TGTGGCTGGACCATTCCGTCGTGAGAGCAGTCTGTTGAGGGGAAGATGCC
TCTGCAAGCACTTGCGGAAGGGGACCGTACTGCTATATTTCCACACTCCC
CCATGAGCAATGACGAAAACAATGCCTTTAGTCCTAAAACAAGGCAAGCC
TCGGGCTTCCGAAATTCGAGAGGAAGCCAAAGCCGAATCACCGCAATGGG
TATAACACCCGACGGACTCTTCGGTTTGTCAGAGAATGAGGACGAGTTCT
TCGGTGACTCTTCGGTCGCCTCTTTTCTGAAGCAAATCAAAGATTCTGCA
ACGAAAGAGCCTGAACGAGGAAGCTCGACAACATATCCGATTCCGCGTGC
GACTTCTGGCACAACATCAATTGCCATGCCACCGGTGGCTGAGAATGGTC
CGAGTGTCAAAGCCTACGATCTACCACCACGGCAACTAGCTGACTACCTT
TTAAACCTTTATTTCGAAAAAATACACAGCCTGTATCCATACGTCCATAA
GACAAGCTTCCTTCGTGCTTATGGACGCCTATGGATGCCACTGGCAGAGA
CAGACGCGGAGACCATCTTGTCTGGGCTGGGCTTAGGAGATGCATGCGTG
TCCCTGCCACTCTTCCATTGTGCATTGAACATTATCTTTGCTTTAGGGTG
CCACTTCTCCAAATTAGATCAAACGGCGCGGGAAGCTACGGCAGAAGAGT
TCTTTCAGCGCTCGCAGCGACTACTGAACATGATATCACTTGATAAAGGT
GATTTAGCCCTAGTACAAACATTACTCCTGACATCACAATACTTGCAAGG
AGGCGAGTCCCCATCGAGATGTTGGAATATTATTGGTCTTGCTTGCAGAA
TTGCACAGTCACTTGGAATGCATTCTCTTAAGGCAGATAGGGCCAGAACT
CCAGCCCAAATACAGATGAGAAGGCGCGTCTGGCATGGATGTGTAATGCT
TGATCTATGCTTTTACCGCTGGTGTTGTTCTCATACTGGCTCAGGCGTCT
CCTGCTATGACGTCCAAATTTTCTCAGCCAGTCTTGGAGAATGCTTGGAA
AAGCTGTTGTGACTGCTTGGAAAACATGAACCCGTACAGCAACACGGCCA
GAAACTGCGCCACAAATTTGCGGAAGACTCTATCTCAAGTTCTAGACGGC
CAAGGACAAGAATCTAGAGTGCTTGCCAATAAACCTGTGCCTCAGAGTAC
AGGGCAATATCTGGGCCGAGACACAAGTTTACCTAGGGCACCGAACTACC
TTTCGACTCTCGCTGGATCAGAAGTTGGCGATGATTCCACCCAAGGCGCC
CTGGATACTCAATTTTCTGAGGCATTGGACTCTCTCTGGAGTGGAGATGA
TGTAAACAGTTCTTTGATGGAGATGCTATGGGTTGACCTTTGGTTGACAG
CACCATCATTTTTCTAAGTTCCTTCATTTGAGAATATTGCTCCTTCGTCC
TACGCTTGTCAAGTTTTGCCGTAACGGTTTCCCACCGCGTCAAGCGGGTG
GCTACCCTCGATACCAACAAGTATTATCAAAAAGCAGAATATCCGTGGAT
TTCAGTATCAGCTGCTCGACATCATGTGTTGAAACTGCGATTGAGCTGTC
GCACCTTATGAATGATATTTCAACGACTGAATTAGCAAGTGTGTGGTGGT
ACAATGTCTTTTAATCCCAAGAGCAAGTAGTATGATGTTGGGTCGACCTC
CCATGACTCATTCTTCCGCAGTACCTCTTCCAGAAGCTATCGATGATGAA
TATCTCGATTCAAGCATGGCAACATGTCAACCATCAACGGAAACGCTTTC
AGGAACTGAATTCTATGTCAGAACTCTACAGCTATACAAAATACTACGAA
AGATTCTATCCGAGGTCTATGAACCTTGGGAGGACGAGAGGGCTCCTGAT
CAGTCAGAGCGGCCAAAGTCTGAAAACGAGCTAGCCCAGACATTGCTAAG
TTTGGATGAGGAGCTTCTGGCGTTTGAATCAAACCTTCCAGTGGCTCTAC
AATGGCGTGATGCACAGCAGCCCGCGGATGTGGCTGGACCATTCCGTCGT
GAGAGCAGTCTGTTGAGGGGAAGATGCCTCTGCAAGCACTTGCGGAAGGG
GACCGTACTGCTATATTTCCACACTCCCCCATGAGCAATGACGAAAACAA
TGCCTTTAGTCCTAAAACAAGGCAAGCCTCGGGCTTCCGAAATTCGAGAG
GAAGCCAAAGCCGAATCACCGCAATGGGTATAACACCCGACGGACTCTTC
GGTTTGTCAGAGAATGAGGACGAGTTCTTCGGTGACTCTTCGGTCGCCTC
TTTTCTGAAGCAAATCAAAGATTCTGCAACGAAAGAGCCTGAACGAGGAA
GCTCGACAACATATCCGATTCCGCGTGCGACTTCTGGCACAACATCAATT
GCCATGCCACCGGTGGCTGAGAATGGTCCGAGTGTCAAAGCCTACGATCT
ACCACCACGGCAACTAGCTGACTACCTTTTAAACCTTTATTTCGAAAAAA
TACACAGCCTGTATCCATACGTCCATAAGACAAGCTTCCTTCGTGCTTAT
GGACGCCTATGGATGCCACTGGCAGAGACAGACGCGGAGACCATCTTGTC
TGGGCTGGGCTTAGGAGATGCATGCGTGTCCCTGCCACTCTTCCATTGTG
CATTGAACATTATCTTTGCTTTAGGGTGCCACTTCTCCAAATTAGATCAA
ACGGCGCGGGAAGCTACGGCAGAAGAGTTCTTTCAGCGCTCGCAGCGACT
ACTGAACATGATATCACTTGATAAAGGTGATTTAGCCCTAGTACAAACAT
TACTCCTGACATCACAATACTTGCAAGGAGGCGAGTCCCCATCGAGATGT
TGGAATATTATTGGTCTTGCTTGCAGAATTGCACAGTCACTTGGAATGCA
TTCTCTTAAGGCAGATAGGGCCAGAACTCCAGCCCAAATACAGATGAGAA
GGCGCGTCTGGCATGGATGTGTAATGCTTGATCTATGCTTTTACCGCTGG
TGTTGTTCTCATACTGGCTCAGGCGTCTCCTGCTATGACGTCCAAATTTT
CTCAGCCAGTCTTGGAGAATGCTTGGAAAAGCTGTTGTGACTGCTTGGAA
AACATGAACCCGTACAGCAACACGGCCAGAAACTGCGCCACAAATTTGCG
GAAGACTCTATCTCAAGTTCTAGACGGCCAAGGACAAGAATCTAGAGTGC
TTGCCAATAAACCTGTGCCTCAGAGTACAGGGCAATATCTGGGCCGAGAC
ACAAGTTTACCTAGGGCACCGAACTACCTTTCGACTCTCGCTGGATCAGA
AGTTGGCGATGATTCCACCCAAGGCGCCCTGGATACTCAATTTTCTGAGG
CATTGGACTCTCTCTGGAGTGGAGATGATGTAAACAGTTCTTTGATGGAG
ATGCTATGGGTTGACCTTTGGTTGACAGCACCATCATTTTTCTAAGTTCC
TTCATTTGAGAATATTGCTCCTTCGTCCTACGCTTGTCAAGTTTTGCCGT
AACGGTTTCCCACCGCGTCAAGCGGGTGGCTACCCTCGATACCAACAAGT
ATTATCAAAAAGCAGAATATCCGTGGATTTCAGTATCAGCTGCTCGACAT
CATGTGTTGAAACTGCGATTGAGCTGTCGCACCTTATGAATGATATTTCA
ACGACTGAATTAGCAAGTGTGTGGTGGTACAATGTCTTTTAATCCCAAGA
GCAAGTAGTATGATGTTGGGTCGACCTCCCATGACTCATTCTTCCGCAGT
ACCTCTTCCAGAAGCTATCGATGATGAATATCTCGATTCAAGCATGGCAA
CATGTCAACCATCAACGGAAACGCTTTCAGGAACTGAATTCTATGTCAGA
ACTCTACAGCTATACAAAATACTACGAAAGATTCTATCCGAGGTCTATGA
ACCTTGGGAGGACGAGAGGGCTCCTGATCAGTCAGAGCGGCCAAAGTCTG
AAAACGAGCTAGCCCAGACATTGCTAAGTTTGGATGAGGAGCTTCTGGCG
TTTGAATCAAACCTTCCAGTGGCTCTACAATGGCGTGATGCACAGCAGCC
CGCGGATGTGGCTGGACCATTCCGTCGTGAGAGCAGTCTGTTGAGGGGAA
GATGCCTCTGCAAGCACTTGCGGAAGGGGACCGTACTGCTATATTTCCAC
ACTCCCCCATGAGCAATGACGAAAACAATGCCTTTAGTCCTAAAACAAGG
CAAGCCTCGGGCTTCCGAAATTCGAGAGGAAGCCAAAGCCGAATCACCGC
AATGGGTATAACACCCGACGGACTCTTCGGTTTGTCAGAGAATGAGGACG
AGTTCTTCGGTGACTCTTCGGTCGCCTCTTTTCTGAAGCAAATCAAAGAT
TCTGCAACGAAAGAGCCTGAACGAGGAAGCTCGACAACATATCCGATTCC
GCGTGCGACTTCTGGCACAACATCAATTGCCATGCCACCGGTGGCTGAGA
ATGGTCCGAGTGTCAAAGCCTACGATCTACCACCACGGCAACTAGCTGAC
TACCTTTTAAACCTTTATTTCGAAAAAATACACAGCCTGTATCCATACGT
CCATAAGACAAGCTTCCTTCGTGCTTATGGACGCCTATGGATGCCACTGG
CAGAGACAGACGCGGAGACCATCTTGTCTGGGCTGGGCTTAGGAGATGCA
TGCGTGTCCCTGCCACTCTTCCATTGTGCATTGAACATTATCTTTGCTTT
AGGGTGCCACTTCTCCAAATTAGATCAAACGGCGCGGGAAGCTACGGCAG
AAGAGTTCTTTCAGCGCTCGCAGCGACTACTGAACATGATATCACTTGAT
AAAGGTGATTTAGCCCTAGTACAAACATTACTCCTGACATCACAATACTT
GCAAGGAGGCGAGTCCCCATCGAGATGTTGGAATATTATTGGTCTTGCTT
GCAGAATTGCACAGTCACTTGGAATGCATTCTCTTAAGGCAGATAGGGCC
AGAACTCCAGCCCAAATACAGATGAGAAGGCGCGTCTGGCATGGATGTGT
AATGCTTGATCT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003677 | DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:1893503..1895676 - |
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