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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:1898585..1899132+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005561-T1 ID=CBS51388_005561-T1|Name=CBS51388_005561-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=548bp|location=Sequence derived from alignment at An08:1898585..1899132+ (Aspergillus niger CBS 513.88)
ATGGAGCAGAACGAAGAAGTCAACCTGGAAGAGGTAAGTATACATCAACC
ATGGCATACATAGCACATAGTAACAAGTCGTCTTGCAGCGCTTGAAATCT
GCCCTCTGGTTGTCGATTGGAAAGATCGTGGATGAAGAGACTATTAAGCT
TGGTGTCAACGCCACCCCTCAGTTTATCGGCGCTTTGACTGAAATGGTCT
GGGCCCAAATTGGTAGGTACATTTTGTACGCGAAAGTATTTGCAGACGAG
TCTCGATGCCGCTCACTCGTTGCATGGTGACTTTCGTCATATCTCGATCA
CTGACCAGCCGCTGACTAAGGATGATGAACAGAGACGGTCAGTCAGGATC
TGGAGTCATTTGCTAAGTAAGTCACGATCTGTAAGCCCTGGTTCCTAATT
AGCAGGGCCTGGTTACCCTGATTTGATGTGGCCGTGACCGTCCAGGGCCG
ATCTGGATAAGGATATGCTTGACCTTGGTTCCGGGCTAACGCTCGGAATT
TCCTATTTAGGCATGCCGGGCGCTCAACAGTCAATGTCGCAGATGTGA back to topCoding sequence (CDS) from alignment at An08:1898585..1899132+ >CBS51388_005561-T1 ID=CBS51388_005561-T1|Name=CBS51388_005561-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1176bp|location=Sequence derived from alignment at An08:1898585..1899132+ (Aspergillus niger CBS 513.88)
ATGGAGCAGAACGAAGAAGTCAACCTGGAAGAGCGCTTGAAATCTGCCCT
CTGGTTGTCGATTGGAAAGATCGTGGATGAAGAGACTATTAAGCTTGGTG
TCAACGCCACCCCTCAGTTTATCGGCGCTTTGACTGAAATGGTCTGGGCC
CAAATTGAGACGGTCAGTCAGGATCTGGAGTCATTTGCTAAGGCCGATCT
GGATAAGGATATGCTTGACCTTGGTTCCGGGCTAACGCTCGGAATTTCCT
ATTTAGGCATGCCGGGCGCTCAACAGTCAATGTCGCAGATGTGAATGGAG
CAGAACGAAGAAGTCAACCTGGAAGAGCGCTTGAAATCTGCCCTCTGGTT
GTCGATTGGAAAGATCGTGGATGAAGAGACTATTAAGCTTGGTGTCAACG
CCACCCCTCAGTTTATCGGCGCTTTGACTGAAATGGTCTGGGCCCAAATT
GAGACGGTCAGTCAGGATCTGGAGTCATTTGCTAAGGCCGATCTGGATAA
GGATATGCTTGACCTTGGTTCCGGGCTAACGCTCGGAATTTCCTATTTAG
GCATGCCGGGCGCTCAACAGTCAATGTCGCAGATGTGAATGGAGCAGAAC
GAAGAAGTCAACCTGGAAGAGCGCTTGAAATCTGCCCTCTGGTTGTCGAT
TGGAAAGATCGTGGATGAAGAGACTATTAAGCTTGGTGTCAACGCCACCC
CTCAGTTTATCGGCGCTTTGACTGAAATGGTCTGGGCCCAAATTGAGACG
GTCAGTCAGGATCTGGAGTCATTTGCTAAGGCCGATCTGGATAAGGATAT
GCTTGACCTTGGTTCCGGGCTAACGCTCGGAATTTCCTATTTAGGCATGC
CGGGCGCTCAACAGTCAATGTCGCAGATGTGAATGGAGCAGAACGAAGAA
GTCAACCTGGAAGAGCGCTTGAAATCTGCCCTCTGGTTGTCGATTGGAAA
GATCGTGGATGAAGAGACTATTAAGCTTGGTGTCAACGCCACCCCTCAGT
TTATCGGCGCTTTGACTGAAATGGTCTGGGCCCAAATTGAGACGGTCAGT
CAGGATCTGGAGTCATTTGCTAAGGCCGATCTGGATAAGGATATGCTTGA
CCTTGGTTCCGGGCTAACGCTCGGAATTTCCTATTTAGGCATGCCGGGCG
CTCAACAGTCAATGTCGCAGATGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0071821 | FANCM-MHF complex |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046982 | protein heterodimerization activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009072 |
| DBxref | InterPro:IPR029003 |
| DBxref | PFAM:PF15630 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:1898585..1899132 + |
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