You are here

Home

CBS51388_005568-T1, CBS51388_005568-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005568-T1
Unique NameCBS51388_005568-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:1909385..1911061-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005568-T1 ID=CBS51388_005568-T1|Name=CBS51388_005568-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1677bp|location=Sequence derived from alignment at An08:1909385..1911061- (Aspergillus niger CBS 513.88)
ATGCGCGCTGTTTCAACTATAATCGGCGTGGCAGCCGCTGTGCCGCTGGT
TGCGTCTGCAGCCATTCAGACAAGATCAGCTGGCTCTGACCTCCCCATCG
TGAACACCACTCTGGGATATGTGCGGGGCACACACTCCCCATTCCGCGGT
GGTGACACCGCCATCGTCTACAAGGGTATACCGTTCGCTGCTGCCCCGAC
TGGTGAAAACCGCTGGAGGGAGCCCCAGTCACCCCAGCCCTGGTCTGGCG
TTCTGAATGCAACGGAATTCGGTCCCCAATGCGCCCAGTCCTACAGCAGT
GCAGGCATCTTCAGCAGCGGGAAGAAGACCACCAGCGAGGACTGCCTTTA
CCTGAACATCTGGACCCCCAACTACAATGACACCTCCGATATCACCTCCA
AGAACTTGCCGGTGTACTTCTGGATCTACGGCGGTCGCTTTGAGGGTGGT
TCAGGCGACGTCTTGACCTACGATGGTACCGGTCTCGCCGCCAAGGACAT
CATTGTTGTCACCATCAACTACCGGTTGGGCCCCTTCGGCTTCCTCGCCC
ACCCCGAACTGTCTGCCGAGTCCGGCCACAACAGCTCCGGTAACTACGGT
ATCCTCGACCAGCAAGCCGCCCTTCGCTGGGTTCATGAGAATATCGCCAA
CTTTGGCGGTAATGCCAGCCAGATCACTGTTGGCGGTCAATCGGCCGGCT
CGGCCAGCGCCTTGGACAGCATGTGGAGCCCATTGAACGAGGGCCTCGTT
GCCGGCGTCATCTCTGAGAGCGGTGCCCGCGGTCCCCACGACCCCATGAC
CGGCAGTGCTGCCACCAGCCACCGCACCAAGGTGGCTGCCGAAGCTCAGG
GTATCGAGTTCCTCAAGGAGCTGAACGTCACGTCCATCAAGGAACTGCGC
ACCACTGTCTCCATGGAGACCCTGCTCGAATACGACTCCCTCAGCGACAC
TATCTTCGAGGGCACTCAGTTCGCCAACGCCTCCGCCTTCTTCATGGAAC
CCCCCATGTGGCGTCCCAACATCGATGGCTACGTCTTCCCCCATGACTAC
ACCCAGTCTCTCCTTCTCGACGCCCACGCCGACGTGCCCATTCTCACCGG
AAACAACAAGGACGAGTCCGGCGCTGAGCCAGACCCAGGTCTCACTGCCT
CCACCTACAACACTCTCTACCAGGAAGTTTTCCAGAATTTCTCCGAGGAG
TTTTTCAAGCTCTACCCCGGCGACTCTACCTCCCAGGCCAACAACAACTC
CAATGCCCTCTACCGCGACATGAGCCGCATCGGTACCTGGCAGTGGGCTC
TTGCCTGGGCCGAAGGTGGTGCCAAGAGCCCTGTCTACACTTACTACTTC
ACCCGCTCCCCGGCCGAGAACCGTGGCGAGGGCGCCTATCACGGCTCAGA
ACTCTGGTACACCTTCAACAACATCCCCTATTCCGACTACTCTAACGTTA
CTTGGTACCCCTATGACTATGAAGTCGAGGAGTACATGTCCAACTACTGG
GCTAACTTCATCCGTACCGGCAACCCTAACGGCGACGGCCTCCCTCACTT
CCCGCCTAGCACCGAGACTAAGCAGACTATGTGGCTGGGTGACTCTTGGG
GTGCGGGTCCTATTTCTGCTAGCGAGGAGCGCATCGAATTCATTAAGAGC
TGGTTTGCCACCATGCCTGAGTGGTAG
back to top

Coding sequence (CDS) from alignment at An08:1909385..1911061-

>CBS51388_005568-T1 ID=CBS51388_005568-T1|Name=CBS51388_005568-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1677bp|location=Sequence derived from alignment at An08:1909385..1911061- (Aspergillus niger CBS 513.88)
ATGCGCGCTGTTTCAACTATAATCGGCGTGGCAGCCGCTGTGCCGCTGGT
TGCGTCTGCAGCCATTCAGACAAGATCAGCTGGCTCTGACCTCCCCATCG
TGAACACCACTCTGGGATATGTGCGGGGCACACACTCCCCATTCCGCGGT
GGTGACACCGCCATCGTCTACAAGGGTATACCGTTCGCTGCTGCCCCGAC
TGGTGAAAACCGCTGGAGGGAGCCCCAGTCACCCCAGCCCTGGTCTGGCG
TTCTGAATGCAACGGAATTCGGTCCCCAATGCGCCCAGTCCTACAGCAGT
GCAGGCATCTTCAGCAGCGGGAAGAAGACCACCAGCGAGGACTGCCTTTA
CCTGAACATCTGGACCCCCAACTACAATGACACCTCCGATATCACCTCCA
AGAACTTGCCGGTGTACTTCTGGATCTACGGCGGTCGCTTTGAGGGTGGT
TCAGGCGACGTCTTGACCTACGATGGTACCGGTCTCGCCGCCAAGGACAT
CATTGTTGTCACCATCAACTACCGGTTGGGCCCCTTCGGCTTCCTCGCCC
ACCCCGAACTGTCTGCCGAGTCCGGCCACAACAGCTCCGGTAACTACGGT
ATCCTCGACCAGCAAGCCGCCCTTCGCTGGGTTCATGAGAATATCGCCAA
CTTTGGCGGTAATGCCAGCCAGATCACTGTTGGCGGTCAATCGGCCGGCT
CGGCCAGCGCCTTGGACAGCATGTGGAGCCCATTGAACGAGGGCCTCGTT
GCCGGCGTCATCTCTGAGAGCGGTGCCCGCGGTCCCCACGACCCCATGAC
CGGCAGTGCTGCCACCAGCCACCGCACCAAGGTGGCTGCCGAAGCTCAGG
GTATCGAGTTCCTCAAGGAGCTGAACGTCACGTCCATCAAGGAACTGCGC
ACCACTGTCTCCATGGAGACCCTGCTCGAATACGACTCCCTCAGCGACAC
TATCTTCGAGGGCACTCAGTTCGCCAACGCCTCCGCCTTCTTCATGGAAC
CCCCCATGTGGCGTCCCAACATCGATGGCTACGTCTTCCCCCATGACTAC
ACCCAGTCTCTCCTTCTCGACGCCCACGCCGACGTGCCCATTCTCACCGG
AAACAACAAGGACGAGTCCGGCGCTGAGCCAGACCCAGGTCTCACTGCCT
CCACCTACAACACTCTCTACCAGGAAGTTTTCCAGAATTTCTCCGAGGAG
TTTTTCAAGCTCTACCCCGGCGACTCTACCTCCCAGGCCAACAACAACTC
CAATGCCCTCTACCGCGACATGAGCCGCATCGGTACCTGGCAGTGGGCTC
TTGCCTGGGCCGAAGGTGGTGCCAAGAGCCCTGTCTACACTTACTACTTC
ACCCGCTCCCCGGCCGAGAACCGTGGCGAGGGCGCCTATCACGGCTCAGA
ACTCTGGTACACCTTCAACAACATCCCCTATTCCGACTACTCTAACGTTA
CTTGGTACCCCTATGACTATGAAGTCGAGGAGTACATGTCCAACTACTGG
GCTAACTTCATCCGTACCGGCAACCCTAACGGCGACGGCCTCCCTCACTT
CCCGCCTAGCACCGAGACTAAGCAGACTATGTGGCTGGGTGACTCTTGGG
GTGCGGGTCCTATTTCTGCTAGCGAGGAGCGCATCGAATTCATTAAGAGC
TGGTTTGCCACCATGCCTGAGTGGTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005568CBS51388_005568Aspergillus niger CBS 513.88gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005568-T1.cdsCBS51388_005568-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005568-T1.exon1CBS51388_005568-T1.exon1Aspergillus niger CBS 513.88exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005568-T1CBS51388_005568-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
NoteMEROPS:MER0030934
DBxrefInterPro:IPR019826
DBxrefInterPro:IPR019819
DBxrefInterPro:IPR002018
DBxrefInterPro:IPR029058
DBxrefPFAM:PF00135
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:1909385..1911061 -
Powered by Drupal