|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:1919275..1921457- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005572-T1 ID=CBS51388_005572-T1|Name=CBS51388_005572-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2183bp|location=Sequence derived from alignment at An08:1919275..1921457- (Aspergillus niger CBS 513.88)
ATGCCCTCTGTCCCTACCGACGGTCTGTCCGTCACCCATCCTTCCTCCAG
GACCGGTCCGCCGCACCTCCGTCTGATCCACTACAATGACGTCTACCACG
TGGAGTATGCTCCCCAATCCCTACACAATAGCTTCCTACACACCTCTTTA
GCAAAAATCTGACAATTCTTCAGAGAAGGATCCGCAGAACCAGTCGGCGG
CGTAGCCCGATTCCAATCCGTCGTCAACTACTACCGCAACGACCCCTCCT
TTTCCGAACAACCAAACGTCTTGACCTTCTTCTCCGGCGATGCCTACAAC
CCCAGTCTCGAAAGCACTGTCACAAAAGGGCGGCACATGGTGCCATTCCT
GAATAAAGCAGGGACGGATGTAGCCTGTGTTGGTGTATGTTAGGAATACA
ACCCGTGCTGCACTGGAGAAAAGCTGACATGGTTATCCGCAGAACCACGA
TCTCGATTTCGGTGTCGCTCAGTTTCGCCATCTACGTACACAGTGTCGGT
TTCCGTGGCTATTGGCTAATGTTCTGGATCTTGATCTGGGAAAGGATGTG
CCGATTGCGAACTGCGAGAAGACATTGATGTTGACCTCGTCTAACGGGAT
CAAGGTGGGTGTGATTGGTTTGGGTGAGAGAGAATGGTATGTTTGATTGC
CTGGTTTATGGTATACATGGGGTAGATAGACTAATTTTGAGCAGGCTTGG
AACGATCAATGCCCTTCCTCCGAACCTCGTTTACAAATCGGCGTACAAGA
CGGCGCTGGAGCTAGTCCCGCGTCTGCGTGAACAAGGCGCCGAATTGATT
GTGGCGGTCACCCACCAACGCGAACCGAACGACTACAAGCTGGCTCAGAA
GCTCCCGCCGGGTATGATTGATATAATCCTGGGTGGCCATGATCATTTTT
ATGCACATGCGGTGATCAATGGTACTCATGTACTTCGGTCGGGCACGGAC
TTCAAGCAATTGAGCTACATCGAGGCTTGGCGCAAGGAGGACGGTGAAGG
ATGGGACTTCAGTATCGTGCGCCGGGATATCGTTCGGTCGATTCCAGAGG
ATCCTACAACGACGGCCATGGTGGATCGCTTGACGTCTAGCTTGGCGGCG
AAACTGGAGAAGCCGATTGGGTACACTACGGTCGCACTTGATGGCCGCTT
CTCGACTGTGCGTCAGAAGGAGTCCAATCTTGGGAACTTTGCATGCGACC
TCATGCGGTTTTACTACGGGGCTGATTGTGCGATAATGGCTGGCGGGACT
ATACGTGGTGATCAGATTTACCCGCCAGGGATCTTGCGACTAAAGGACAT
CCTCAACTGTTTCCCATTCGAAGATCCGGTCGTACTGTTGCGCATCAAGG
GCCGTGCGCTCTTCGATGCCCTGGAGAATGGAGTGAGCCAGCTTCCGGCG
CTCGAAGGACGGTTTACCCAGGTGTCGAACATTGCTTTTAGCTACAACCC
CTCGGCCCCTTCGGGCTCCCGCATCAACTGGGCCCAGGTCGGTGGGGAGC
CGATTGACTTCGATGGGCAGTACACTTTGGCAACCCGCGGATACATGGCC
CGTGGAAAGGACGGGTTTGCGTCTCTACTGGTGCAGTCAGAGGGCGGCGA
AGTCGAAGAGATCGTAGATGAAGAGAGTGGCATCCTGATCAGCACGCTAC
TCCGCCAGTATTTCCTGAGTTTGCGAGTGTTGGGTCGATGGCGTCGCTGG
GGTCCCAGCATGACCCGACACTGGAGCAACGTGCATGATAGCCTCCATTG
CAATGGATGGCTGAAACCGCCGTCCCGCCAGCCGTCTCCAGAATCAAACA
AGGTGCCATACCGACCCCCTCTGTCGCGGTCGAAGAACTACTATTATGGT
CGGTTTCCCGAGATCGTAGAAACCGAGGAGACTGGGAGTCGAGGTGTGGG
CCTGAACGGGGAGGACGAGTCGATGGACTCGGACTCCGATACCGACCCCG
ACATTCTTACCTCTCCTCGTCCGACTACGAACTATGTTACTCTGCCGGCG
CGGTCAGCTACCGAGGAGGAACGCCGCCTGCGTCTGGCGCGCAAGGCGGT
GCGAACGTGGATGCACCGGACGGGCCTGCAGCCATCACCCATTAATGACG
CGGATGAAGTTGGAGAATTCACGCCGACATGGACACCGGGTATCTCGCCG
CGCTTGGAGCAGCGGATTGTGATAGAAAATTAA back to topCoding sequence (CDS) from alignment at An08:1919275..1921457- >CBS51388_005572-T1 ID=CBS51388_005572-T1|Name=CBS51388_005572-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7992bp|location=Sequence derived from alignment at An08:1919275..1921457- (Aspergillus niger CBS 513.88)
GCTTGGAACGATCAATGCCCTTCCTCCGAACCTCGTTTACAAATCGGCGT
ACAAGACGGCGCTGGAGCTAGTCCCGCGTCTGCGTGAACAAGGCGCCGAA
TTGATTGTGGCGGTCACCCACCAACGCGAACCGAACGACTACAAGCTGGC
TCAGAAGCTCCCGCCGGGTATGATTGATATAATCCTGGGTGGCCATGATC
ATTTTTATGCACATGCGGTGATCAATGGTACTCATGTACTTCGGTCGGGC
ACGGACTTCAAGCAATTGAGCTACATCGAGGCTTGGCGCAAGGAGGACGG
TGAAGGATGGGACTTCAGTATCGTGCGCCGGGATATCGTTCGGTCGATTC
CAGAGGATCCTACAACGACGGCCATGGTGGATCGCTTGACGTCTAGCTTG
GCGGCGAAACTGGAGAAGCCGATTGGGTACACTACGGTCGCACTTGATGG
CCGCTTCTCGACTGTGCGTCAGAAGGAGTCCAATCTTGGGAACTTTGCAT
GCGACCTCATGCGGTTTTACTACGGGGCTGATTGTGCGATAATGGCTGGC
GGGACTATACGTGGTGATCAGATTTACCCGCCAGGGATCTTGCGACTAAA
GGACATCCTCAACTGTTTCCCATTCGAAGATCCGGTCGTACTGTTGCGCA
TCAAGGGCCGTGCGCTCTTCGATGCCCTGGAGAATGGAGTGAGCCAGCTT
CCGGCGCTCGAAGGACGGTTTACCCAGGTGTCGAACATTGCTTTTAGCTA
CAACCCCTCGGCCCCTTCGGGCTCCCGCATCAACTGGGCCCAGGTCGGTG
GGGAGCCGATTGACTTCGATGGGCAGTACACTTTGGCAACCCGCGGATAC
ATGGCCCGTGGAAAGGACGGGTTTGCGTCTCTACTGGTGCAGTCAGAGGG
CGGCGAAGTCGAAGAGATCGTAGATGAAGAGAGTGGCATCCTGATCAGCA
CGCTACTCCGCCAGTATTTCCTGAGTTTGCGAGTGTTGGGTCGATGGCGT
CGCTGGGGTCCCAGCATGACCCGACACTGGAGCAACGTGCATGATAGCCT
CCATTGCAATGGATGGCTGAAACCGCCGTCCCGCCAGCCGTCTCCAGAAT
CAAACAAGGTGCCATACCGACCCCCTCTGTCGCGGTCGAAGAACTACTAT
TATGGTCGGTTTCCCGAGATCGTAGAAACCGAGGAGACTGGGAGTCGAGG
TGTGGGCCTGAACGGGGAGGACGAGTCGATGGACTCGGACTCCGATACCG
ACCCCGACATTCTTACCTCTCCTCGTCCGACTACGAACTATGTTACTCTG
CCGGCGCGGTCAGCTACCGAGGAGGAACGCCGCCTGCGTCTGGCGCGCAA
GGCGGTGCGAACGTGGATGCACCGGACGGGCCTGCAGCCATCACCCATTA
ATGACGCGGATGAAGTTGGAGAATTCACGCCGACATGGACACCGGGTATC
TCGCCGCGCTTGGAGCAGCGGATTGTGATAGAAAATTAAAACCACGATCT
CGATTTCGGTGTCGCTCAGTTTCGCCATCTACGTACACAGTGTCGGTTTC
CGTGGCTATTGGCTAATGTTCTGGATCTTGATCTGGGAAAGGATGTGCCG
ATTGCGAACTGCGAGAAGACATTGATGTTGACCTCGTCTAACGGGATCAA
GGTGGGTGTGATTGGTTTGGGTGAGAGAGAATGAGAAGGATCCGCAGAAC
CAGTCGGCGGCGTAGCCCGATTCCAATCCGTCGTCAACTACTACCGCAAC
GACCCCTCCTTTTCCGAACAACCAAACGTCTTGACCTTCTTCTCCGGCGA
TGCCTACAACCCCAGTCTCGAAAGCACTGTCACAAAAGGGCGGCACATGG
TGCCATTCCTGAATAAAGCAGGGACGGATGTAGCCTGTGTTGGTATGCCC
TCTGTCCCTACCGACGGTCTGTCCGTCACCCATCCTTCCTCCAGGACCGG
TCCGCCGCACCTCCGTCTGATCCACTACAATGACGTCTACCACGTGGAGC
TTGGAACGATCAATGCCCTTCCTCCGAACCTCGTTTACAAATCGGCGTAC
AAGACGGCGCTGGAGCTAGTCCCGCGTCTGCGTGAACAAGGCGCCGAATT
GATTGTGGCGGTCACCCACCAACGCGAACCGAACGACTACAAGCTGGCTC
AGAAGCTCCCGCCGGGTATGATTGATATAATCCTGGGTGGCCATGATCAT
TTTTATGCACATGCGGTGATCAATGGTACTCATGTACTTCGGTCGGGCAC
GGACTTCAAGCAATTGAGCTACATCGAGGCTTGGCGCAAGGAGGACGGTG
AAGGATGGGACTTCAGTATCGTGCGCCGGGATATCGTTCGGTCGATTCCA
GAGGATCCTACAACGACGGCCATGGTGGATCGCTTGACGTCTAGCTTGGC
GGCGAAACTGGAGAAGCCGATTGGGTACACTACGGTCGCACTTGATGGCC
GCTTCTCGACTGTGCGTCAGAAGGAGTCCAATCTTGGGAACTTTGCATGC
GACCTCATGCGGTTTTACTACGGGGCTGATTGTGCGATAATGGCTGGCGG
GACTATACGTGGTGATCAGATTTACCCGCCAGGGATCTTGCGACTAAAGG
ACATCCTCAACTGTTTCCCATTCGAAGATCCGGTCGTACTGTTGCGCATC
AAGGGCCGTGCGCTCTTCGATGCCCTGGAGAATGGAGTGAGCCAGCTTCC
GGCGCTCGAAGGACGGTTTACCCAGGTGTCGAACATTGCTTTTAGCTACA
ACCCCTCGGCCCCTTCGGGCTCCCGCATCAACTGGGCCCAGGTCGGTGGG
GAGCCGATTGACTTCGATGGGCAGTACACTTTGGCAACCCGCGGATACAT
GGCCCGTGGAAAGGACGGGTTTGCGTCTCTACTGGTGCAGTCAGAGGGCG
GCGAAGTCGAAGAGATCGTAGATGAAGAGAGTGGCATCCTGATCAGCACG
CTACTCCGCCAGTATTTCCTGAGTTTGCGAGTGTTGGGTCGATGGCGTCG
CTGGGGTCCCAGCATGACCCGACACTGGAGCAACGTGCATGATAGCCTCC
ATTGCAATGGATGGCTGAAACCGCCGTCCCGCCAGCCGTCTCCAGAATCA
AACAAGGTGCCATACCGACCCCCTCTGTCGCGGTCGAAGAACTACTATTA
TGGTCGGTTTCCCGAGATCGTAGAAACCGAGGAGACTGGGAGTCGAGGTG
TGGGCCTGAACGGGGAGGACGAGTCGATGGACTCGGACTCCGATACCGAC
CCCGACATTCTTACCTCTCCTCGTCCGACTACGAACTATGTTACTCTGCC
GGCGCGGTCAGCTACCGAGGAGGAACGCCGCCTGCGTCTGGCGCGCAAGG
CGGTGCGAACGTGGATGCACCGGACGGGCCTGCAGCCATCACCCATTAAT
GACGCGGATGAAGTTGGAGAATTCACGCCGACATGGACACCGGGTATCTC
GCCGCGCTTGGAGCAGCGGATTGTGATAGAAAATTAAAACCACGATCTCG
ATTTCGGTGTCGCTCAGTTTCGCCATCTACGTACACAGTGTCGGTTTCCG
TGGCTATTGGCTAATGTTCTGGATCTTGATCTGGGAAAGGATGTGCCGAT
TGCGAACTGCGAGAAGACATTGATGTTGACCTCGTCTAACGGGATCAAGG
TGGGTGTGATTGGTTTGGGTGAGAGAGAATGAGAAGGATCCGCAGAACCA
GTCGGCGGCGTAGCCCGATTCCAATCCGTCGTCAACTACTACCGCAACGA
CCCCTCCTTTTCCGAACAACCAAACGTCTTGACCTTCTTCTCCGGCGATG
CCTACAACCCCAGTCTCGAAAGCACTGTCACAAAAGGGCGGCACATGGTG
CCATTCCTGAATAAAGCAGGGACGGATGTAGCCTGTGTTGGTATGCCCTC
TGTCCCTACCGACGGTCTGTCCGTCACCCATCCTTCCTCCAGGACCGGTC
CGCCGCACCTCCGTCTGATCCACTACAATGACGTCTACCACGTGGAGCTT
GGAACGATCAATGCCCTTCCTCCGAACCTCGTTTACAAATCGGCGTACAA
GACGGCGCTGGAGCTAGTCCCGCGTCTGCGTGAACAAGGCGCCGAATTGA
TTGTGGCGGTCACCCACCAACGCGAACCGAACGACTACAAGCTGGCTCAG
AAGCTCCCGCCGGGTATGATTGATATAATCCTGGGTGGCCATGATCATTT
TTATGCACATGCGGTGATCAATGGTACTCATGTACTTCGGTCGGGCACGG
ACTTCAAGCAATTGAGCTACATCGAGGCTTGGCGCAAGGAGGACGGTGAA
GGATGGGACTTCAGTATCGTGCGCCGGGATATCGTTCGGTCGATTCCAGA
GGATCCTACAACGACGGCCATGGTGGATCGCTTGACGTCTAGCTTGGCGG
CGAAACTGGAGAAGCCGATTGGGTACACTACGGTCGCACTTGATGGCCGC
TTCTCGACTGTGCGTCAGAAGGAGTCCAATCTTGGGAACTTTGCATGCGA
CCTCATGCGGTTTTACTACGGGGCTGATTGTGCGATAATGGCTGGCGGGA
CTATACGTGGTGATCAGATTTACCCGCCAGGGATCTTGCGACTAAAGGAC
ATCCTCAACTGTTTCCCATTCGAAGATCCGGTCGTACTGTTGCGCATCAA
GGGCCGTGCGCTCTTCGATGCCCTGGAGAATGGAGTGAGCCAGCTTCCGG
CGCTCGAAGGACGGTTTACCCAGGTGTCGAACATTGCTTTTAGCTACAAC
CCCTCGGCCCCTTCGGGCTCCCGCATCAACTGGGCCCAGGTCGGTGGGGA
GCCGATTGACTTCGATGGGCAGTACACTTTGGCAACCCGCGGATACATGG
CCCGTGGAAAGGACGGGTTTGCGTCTCTACTGGTGCAGTCAGAGGGCGGC
GAAGTCGAAGAGATCGTAGATGAAGAGAGTGGCATCCTGATCAGCACGCT
ACTCCGCCAGTATTTCCTGAGTTTGCGAGTGTTGGGTCGATGGCGTCGCT
GGGGTCCCAGCATGACCCGACACTGGAGCAACGTGCATGATAGCCTCCAT
TGCAATGGATGGCTGAAACCGCCGTCCCGCCAGCCGTCTCCAGAATCAAA
CAAGGTGCCATACCGACCCCCTCTGTCGCGGTCGAAGAACTACTATTATG
GTCGGTTTCCCGAGATCGTAGAAACCGAGGAGACTGGGAGTCGAGGTGTG
GGCCTGAACGGGGAGGACGAGTCGATGGACTCGGACTCCGATACCGACCC
CGACATTCTTACCTCTCCTCGTCCGACTACGAACTATGTTACTCTGCCGG
CGCGGTCAGCTACCGAGGAGGAACGCCGCCTGCGTCTGGCGCGCAAGGCG
GTGCGAACGTGGATGCACCGGACGGGCCTGCAGCCATCACCCATTAATGA
CGCGGATGAAGTTGGAGAATTCACGCCGACATGGACACCGGGTATCTCGC
CGCGCTTGGAGCAGCGGATTGTGATAGAAAATTAAAACCACGATCTCGAT
TTCGGTGTCGCTCAGTTTCGCCATCTACGTACACAGTGTCGGTTTCCGTG
GCTATTGGCTAATGTTCTGGATCTTGATCTGGGAAAGGATGTGCCGATTG
CGAACTGCGAGAAGACATTGATGTTGACCTCGTCTAACGGGATCAAGGTG
GGTGTGATTGGTTTGGGTGAGAGAGAATGAGAAGGATCCGCAGAACCAGT
CGGCGGCGTAGCCCGATTCCAATCCGTCGTCAACTACTACCGCAACGACC
CCTCCTTTTCCGAACAACCAAACGTCTTGACCTTCTTCTCCGGCGATGCC
TACAACCCCAGTCTCGAAAGCACTGTCACAAAAGGGCGGCACATGGTGCC
ATTCCTGAATAAAGCAGGGACGGATGTAGCCTGTGTTGGTATGCCCTCTG
TCCCTACCGACGGTCTGTCCGTCACCCATCCTTCCTCCAGGACCGGTCCG
CCGCACCTCCGTCTGATCCACTACAATGACGTCTACCACGTGGAGCTTGG
AACGATCAATGCCCTTCCTCCGAACCTCGTTTACAAATCGGCGTACAAGA
CGGCGCTGGAGCTAGTCCCGCGTCTGCGTGAACAAGGCGCCGAATTGATT
GTGGCGGTCACCCACCAACGCGAACCGAACGACTACAAGCTGGCTCAGAA
GCTCCCGCCGGGTATGATTGATATAATCCTGGGTGGCCATGATCATTTTT
ATGCACATGCGGTGATCAATGGTACTCATGTACTTCGGTCGGGCACGGAC
TTCAAGCAATTGAGCTACATCGAGGCTTGGCGCAAGGAGGACGGTGAAGG
ATGGGACTTCAGTATCGTGCGCCGGGATATCGTTCGGTCGATTCCAGAGG
ATCCTACAACGACGGCCATGGTGGATCGCTTGACGTCTAGCTTGGCGGCG
AAACTGGAGAAGCCGATTGGGTACACTACGGTCGCACTTGATGGCCGCTT
CTCGACTGTGCGTCAGAAGGAGTCCAATCTTGGGAACTTTGCATGCGACC
TCATGCGGTTTTACTACGGGGCTGATTGTGCGATAATGGCTGGCGGGACT
ATACGTGGTGATCAGATTTACCCGCCAGGGATCTTGCGACTAAAGGACAT
CCTCAACTGTTTCCCATTCGAAGATCCGGTCGTACTGTTGCGCATCAAGG
GCCGTGCGCTCTTCGATGCCCTGGAGAATGGAGTGAGCCAGCTTCCGGCG
CTCGAAGGACGGTTTACCCAGGTGTCGAACATTGCTTTTAGCTACAACCC
CTCGGCCCCTTCGGGCTCCCGCATCAACTGGGCCCAGGTCGGTGGGGAGC
CGATTGACTTCGATGGGCAGTACACTTTGGCAACCCGCGGATACATGGCC
CGTGGAAAGGACGGGTTTGCGTCTCTACTGGTGCAGTCAGAGGGCGGCGA
AGTCGAAGAGATCGTAGATGAAGAGAGTGGCATCCTGATCAGCACGCTAC
TCCGCCAGTATTTCCTGAGTTTGCGAGTGTTGGGTCGATGGCGTCGCTGG
GGTCCCAGCATGACCCGACACTGGAGCAACGTGCATGATAGCCTCCATTG
CAATGGATGGCTGAAACCGCCGTCCCGCCAGCCGTCTCCAGAATCAAACA
AGGTGCCATACCGACCCCCTCTGTCGCGGTCGAAGAACTACTATTATGGT
CGGTTTCCCGAGATCGTAGAAACCGAGGAGACTGGGAGTCGAGGTGTGGG
CCTGAACGGGGAGGACGAGTCGATGGACTCGGACTCCGATACCGACCCCG
ACATTCTTACCTCTCCTCGTCCGACTACGAACTATGTTACTCTGCCGGCG
CGGTCAGCTACCGAGGAGGAACGCCGCCTGCGTCTGGCGCGCAAGGCGGT
GCGAACGTGGATGCACCGGACGGGCCTGCAGCCATCACCCATTAATGACG
CGGATGAAGTTGGAGAATTCACGCCGACATGGACACCGGGTATCTCGCCG
CGCTTGGAGCAGCGGATTGTGATAGAAAATTAAAACCACGATCTCGATTT
CGGTGTCGCTCAGTTTCGCCATCTACGTACACAGTGTCGGTTTCCGTGGC
TATTGGCTAATGTTCTGGATCTTGATCTGGGAAAGGATGTGCCGATTGCG
AACTGCGAGAAGACATTGATGTTGACCTCGTCTAACGGGATCAAGGTGGG
TGTGATTGGTTTGGGTGAGAGAGAATGAGAAGGATCCGCAGAACCAGTCG
GCGGCGTAGCCCGATTCCAATCCGTCGTCAACTACTACCGCAACGACCCC
TCCTTTTCCGAACAACCAAACGTCTTGACCTTCTTCTCCGGCGATGCCTA
CAACCCCAGTCTCGAAAGCACTGTCACAAAAGGGCGGCACATGGTGCCAT
TCCTGAATAAAGCAGGGACGGATGTAGCCTGTGTTGGTATGCCCTCTGTC
CCTACCGACGGTCTGTCCGTCACCCATCCTTCCTCCAGGACCGGTCCGCC
GCACCTCCGTCTGATCCACTACAATGACGTCTACCACGTGGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009166 | nucleotide catabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016787 | hydrolase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR041821 |
| DBxref | InterPro:IPR029052 |
| DBxref | InterPro:IPR036907 |
| DBxref | InterPro:IPR008334 |
| DBxref | InterPro:IPR006179 |
| DBxref | PFAM:PF02872 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:1919275..1921457 - |
|
