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CBS51388_005582-T1, CBS51388_005582-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005582-T1
Unique NameCBS51388_005582-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:1947416..1949077+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005582-T1 ID=CBS51388_005582-T1|Name=CBS51388_005582-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1662bp|location=Sequence derived from alignment at An08:1947416..1949077+ (Aspergillus niger CBS 513.88)
ATGTCATCGCAAAGTGCAGAGGACAGCACCCGTTTAGAGCAAGTCTTAGA
TGGGTCGACTCCATACGACTCCGAGTCCACCCTCAGTCGCGGCGACTTGC
AGGAAAAGCCATCCGAACTCGACGATGAGGACCCCGAGGCCCTGACTCGG
CTCGAGACGGCCCAGTCAGCCGTTAAGCCCCCCTCCGAACTATGGAAAGA
GATCATCTTCATCGCCGTCGTCTGCATGGCTCAATTCATGACCCAAGCCG
GTCTATGCATGTCCATTGCCCCGGCTCACATCATCGGTGCCAGCTTTGGC
ACCACCAATGCAGGCCAGCTCAGTTGGTTTGCTGCAGCCTACAGCTTAAC
TGTCGGGACCTTCATCCTGGTTGCTGGTCGGCTCGGGGACGTCTACGGCC
ATCGGCTCATGTTTATCATCGGCTTCTCCTGGTTCGGTCTCTGGTCTCTC
CTGGCCGGCTTCAGCGTCTGGTCGAATAAGGTCTTTTTCGACTGCTGTCG
AGCATTGCAGGGAATTGGTCCCGCCATGTTATTGCCGAACGCCATTGCCA
TTCTGGGACGAGCCTATCCTCCCGGTCTGCGCAAGGAGATGATCTTTAGC
TGTTTCGGAGCTACAGCCCCGGGCGGGTTCATCGTCGGAGGTGTCTTCTC
CTCCCTCTTTGCTCAGCTCGTTTGGTGGCCGTGGGCATACTGGGTTATGG
GCATGGTGTGCTTTGTACTGGCAGCGCTCGGTATTCTTGTGATTCCGGTT
ACCCGTCGCCCGAAGTTCACAGACGACATGACGGCCTGGACGCGACTAGA
TATTCTCGGTGCCATCACCGGTATCTCGGCCCTGGTCCTGATCAACTTTG
CCTGGAACCAGGCTGCCCTTGTGGGATGGCAGACACCCTACACCTATGCC
CTTCTAATTGTCGGATTCGTCTTCTTTGGTGTCTTCATTTTTGTTGAACG
CTCGGCCCCGTGCCCCTTGATCCCACGATCAGTCCTCTCCGGTGACCTGG
CCTGGGTGCTCGGGTGCATTGCGGCGGGTTGGTCCAGCTTCGGAATTATC
ATCTACTACTTCTATCAATTCATGGAAGTTATCAAGGGTGACTCCCCACT
ACTCGCGACCGCTAAATGGTCCGCCGCTGCGCCGTCCGGCGCCGTTGCTG
CACTGGTTACCGGTTTCCTGCTGGGAAAGCTACCACCTAGCGTGATCATG
TTTTTCGCCATGTGCTTCTTCACTGCTGGACAAGCCATCTTCGCCACTGC
CCCTGTGCATCAGACGTACTGGGCGCAGGCGTTTGTCGTTAGTCTGATCA
CGTCGTGGGGAATGTACGTACCGAGTCCAATAACCCCTTCATTTTCGTTA
CATATATTAACCGACAATAGGGACATGTCCTTCCCATCAGGAACACTTAT
TCTGAGTAACTCGATGCACCATCACCACCAGGGTCTGGCAGCGTCGCTTG
TCACGACAACAGTCAATTATTCTATCTCGCTGGGACTGGGATTCGCCGGT
ACTGTAGAGTCGAACGTCAACGATGGCGGGAAGAATCCCCTGAAGGGATA
CCGCGGGGCGCTTTATCTTGGCATAGGCCTTGCTGGGTTAGGAATGGTCA
CCTCTATTTGCTTCATGTCGGTTAGCTGGAGACGTCATCGTCTGGGGAAA
GAGTCGACGTGA
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Coding sequence (CDS) from alignment at An08:1947416..1949077+

>CBS51388_005582-T1 ID=CBS51388_005582-T1|Name=CBS51388_005582-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3210bp|location=Sequence derived from alignment at An08:1947416..1949077+ (Aspergillus niger CBS 513.88)
ATGTCATCGCAAAGTGCAGAGGACAGCACCCGTTTAGAGCAAGTCTTAGA
TGGGTCGACTCCATACGACTCCGAGTCCACCCTCAGTCGCGGCGACTTGC
AGGAAAAGCCATCCGAACTCGACGATGAGGACCCCGAGGCCCTGACTCGG
CTCGAGACGGCCCAGTCAGCCGTTAAGCCCCCCTCCGAACTATGGAAAGA
GATCATCTTCATCGCCGTCGTCTGCATGGCTCAATTCATGACCCAAGCCG
GTCTATGCATGTCCATTGCCCCGGCTCACATCATCGGTGCCAGCTTTGGC
ACCACCAATGCAGGCCAGCTCAGTTGGTTTGCTGCAGCCTACAGCTTAAC
TGTCGGGACCTTCATCCTGGTTGCTGGTCGGCTCGGGGACGTCTACGGCC
ATCGGCTCATGTTTATCATCGGCTTCTCCTGGTTCGGTCTCTGGTCTCTC
CTGGCCGGCTTCAGCGTCTGGTCGAATAAGGTCTTTTTCGACTGCTGTCG
AGCATTGCAGGGAATTGGTCCCGCCATGTTATTGCCGAACGCCATTGCCA
TTCTGGGACGAGCCTATCCTCCCGGTCTGCGCAAGGAGATGATCTTTAGC
TGTTTCGGAGCTACAGCCCCGGGCGGGTTCATCGTCGGAGGTGTCTTCTC
CTCCCTCTTTGCTCAGCTCGTTTGGTGGCCGTGGGCATACTGGGTTATGG
GCATGGTGTGCTTTGTACTGGCAGCGCTCGGTATTCTTGTGATTCCGGTT
ACCCGTCGCCCGAAGTTCACAGACGACATGACGGCCTGGACGCGACTAGA
TATTCTCGGTGCCATCACCGGTATCTCGGCCCTGGTCCTGATCAACTTTG
CCTGGAACCAGGCTGCCCTTGTGGGATGGCAGACACCCTACACCTATGCC
CTTCTAATTGTCGGATTCGTCTTCTTTGGTGTCTTCATTTTTGTTGAACG
CTCGGCCCCGTGCCCCTTGATCCCACGATCAGTCCTCTCCGGTGACCTGG
CCTGGGTGCTCGGGTGCATTGCGGCGGGTTGGTCCAGCTTCGGAATTATC
ATCTACTACTTCTATCAATTCATGGAAGTTATCAAGGGTGACTCCCCACT
ACTCGCGACCGCTAAATGGTCCGCCGCTGCGCCGTCCGGCGCCGTTGCTG
CACTGGTTACCGGTTTCCTGCTGGGAAAGCTACCACCTAGCGTGATCATG
TTTTTCGCCATGTGCTTCTTCACTGCTGGACAAGCCATCTTCGCCACTGC
CCCTGTGCATCAGACGTACTGGGCGCAGGCGTTTGTCGTTAGTCTGATCA
CGTCGTGGGGAATGGACATGTCCTTCCCATCAGGAACACTTATTCTGAGT
AACTCGATGCACCATCACCACCAGGGTCTGGCAGCGTCGCTTGTCACGAC
AACAGTCAATTATTCTATCTCGCTGGGACTGGGATTCGCCGGTACTGTAG
AGTCGAACGTCAACGATGGCGGGAAGAATCCCCTGAAGGGATACCGCGGG
GCGCTTTATCTTGGCATAGGCCTTGCTGGGTTAGGAATGGTCACCTCTAT
TTGCTTCATGTCGGTTAGCTGGAGACGTCATCGTCTGGGGAAAGAGTCGA
CGTGAATGTCATCGCAAAGTGCAGAGGACAGCACCCGTTTAGAGCAAGTC
TTAGATGGGTCGACTCCATACGACTCCGAGTCCACCCTCAGTCGCGGCGA
CTTGCAGGAAAAGCCATCCGAACTCGACGATGAGGACCCCGAGGCCCTGA
CTCGGCTCGAGACGGCCCAGTCAGCCGTTAAGCCCCCCTCCGAACTATGG
AAAGAGATCATCTTCATCGCCGTCGTCTGCATGGCTCAATTCATGACCCA
AGCCGGTCTATGCATGTCCATTGCCCCGGCTCACATCATCGGTGCCAGCT
TTGGCACCACCAATGCAGGCCAGCTCAGTTGGTTTGCTGCAGCCTACAGC
TTAACTGTCGGGACCTTCATCCTGGTTGCTGGTCGGCTCGGGGACGTCTA
CGGCCATCGGCTCATGTTTATCATCGGCTTCTCCTGGTTCGGTCTCTGGT
CTCTCCTGGCCGGCTTCAGCGTCTGGTCGAATAAGGTCTTTTTCGACTGC
TGTCGAGCATTGCAGGGAATTGGTCCCGCCATGTTATTGCCGAACGCCAT
TGCCATTCTGGGACGAGCCTATCCTCCCGGTCTGCGCAAGGAGATGATCT
TTAGCTGTTTCGGAGCTACAGCCCCGGGCGGGTTCATCGTCGGAGGTGTC
TTCTCCTCCCTCTTTGCTCAGCTCGTTTGGTGGCCGTGGGCATACTGGGT
TATGGGCATGGTGTGCTTTGTACTGGCAGCGCTCGGTATTCTTGTGATTC
CGGTTACCCGTCGCCCGAAGTTCACAGACGACATGACGGCCTGGACGCGA
CTAGATATTCTCGGTGCCATCACCGGTATCTCGGCCCTGGTCCTGATCAA
CTTTGCCTGGAACCAGGCTGCCCTTGTGGGATGGCAGACACCCTACACCT
ATGCCCTTCTAATTGTCGGATTCGTCTTCTTTGGTGTCTTCATTTTTGTT
GAACGCTCGGCCCCGTGCCCCTTGATCCCACGATCAGTCCTCTCCGGTGA
CCTGGCCTGGGTGCTCGGGTGCATTGCGGCGGGTTGGTCCAGCTTCGGAA
TTATCATCTACTACTTCTATCAATTCATGGAAGTTATCAAGGGTGACTCC
CCACTACTCGCGACCGCTAAATGGTCCGCCGCTGCGCCGTCCGGCGCCGT
TGCTGCACTGGTTACCGGTTTCCTGCTGGGAAAGCTACCACCTAGCGTGA
TCATGTTTTTCGCCATGTGCTTCTTCACTGCTGGACAAGCCATCTTCGCC
ACTGCCCCTGTGCATCAGACGTACTGGGCGCAGGCGTTTGTCGTTAGTCT
GATCACGTCGTGGGGAATGGACATGTCCTTCCCATCAGGAACACTTATTC
TGAGTAACTCGATGCACCATCACCACCAGGGTCTGGCAGCGTCGCTTGTC
ACGACAACAGTCAATTATTCTATCTCGCTGGGACTGGGATTCGCCGGTAC
TGTAGAGTCGAACGTCAACGATGGCGGGAAGAATCCCCTGAAGGGATACC
GCGGGGCGCTTTATCTTGGCATAGGCCTTGCTGGGTTAGGAATGGTCACC
TCTATTTGCTTCATGTCGGTTAGCTGGAGACGTCATCGTCTGGGGAAAGA
GTCGACGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005582CBS51388_005582Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005582-T1.exon1CBS51388_005582-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_005582-T1.exon2CBS51388_005582-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005582-T1.cdsCBS51388_005582-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005582-T1CBS51388_005582-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:1947416..1949077 +
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