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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:1972288..1973507- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005588-T1 ID=CBS51388_005588-T1|Name=CBS51388_005588-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1220bp|location=Sequence derived from alignment at An08:1972288..1973507- (Aspergillus niger CBS 513.88)
ATGTTGTTTCGCCTTCTATCCGCAACGGGTGCCTTGTGCATCACTACTGC
AGCTGCCGCGGCTCTACCTGCGCCTCAACTGCGTTCTACCACTGGATCTC
ATCAAATCAACCTCCCTGCTATCCCCTGCGCTTTCTCCGACTCGACTTGC
ACTGAATCCTTCGACTCTGTTTCACAACTGGTACGTCTTCCACGTTGGTA
TCAACGCAGTCGACCATAATCCATACTAACAACCCCCGATAGACCATCGA
CTTCTCCACCCAAAATGGCACCCTTCGAGCCAACAAACAACCCATCTTCC
CAGCTACCGTACCGATGCAGTTTACAGCGGATCGCAAGTGGGAGTCATTC
GTTCAGCCGGTTCAGGTCTCCTACTCGTTGGACGTACGGCCGCTGCCTGC
TCGCCCTGGCGCTGATCTGGGCGATATCTACTACCTCAAGCTCCGGCTTT
TCGACCAGCACGGTCAAGCTGCCACGCAGAACTCCATCGCGATCAGTCTA
ATCAGAGACGCCCAGGGTGGTCTGCAGCTGGCGATGATCGACCCGAACGG
TAGCCGCGATTACGGTCACGGAAACCGTGTATGGCGGATGAAGGCCTGGA
AGGAACAGCTCGAAACATACTACAACCATGCCAAGGAGGCCGTCAAGAAC
TGCGTCAAGCCTGAACACCCGAAGCACGAACATGAACATGAACACTCCCA
CGAGCACCCTCACAAGACGGTTGGATCTTCTTCGGACTCCCACCCCCACC
GCCGTCCTTCCTCCAACAAGTACTACCCCTCAAGCCAGAGCGGCCACTTC
TTCTGGACTGGACGTGAACAGAGCATCATGAAGATCGCTCGTCCGGTCAT
CCTCCCCGCCCTGATGGGAATCATGGCTGGTGGAGTTGCCTGCATTGTTG
GATTCCTGCTGGGTCGTCTCATCATCTCTATCTACTTGTGCGCGGCGAGC
CGCCGGCAGCAGCAGCAGAACATTCCCATCATCCGCATCGAAGAGGGCGA
GCCTATCTCCGAGAAGGAAGCCCTTCTTGAACCCTACAGCGATCAGGAAC
CTAGACGCGCCAATCATTCCCATGATCTTTCTCTCTTTCATTCCTTTCCT
TACGTTCTCTTTCTCTCTCTCTTTACCCCTGACGTTCACCTGTACATTAC
AGCCCTCTCCTTGTGTCTCTGTGTCGACGTTCATGATATCCAATGTAGCA
TAGCATACATACCCACGTGA back to topCoding sequence (CDS) from alignment at An08:1972288..1973507- >CBS51388_005588-T1 ID=CBS51388_005588-T1|Name=CBS51388_005588-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2316bp|location=Sequence derived from alignment at An08:1972288..1973507- (Aspergillus niger CBS 513.88)
ACCATCGACTTCTCCACCCAAAATGGCACCCTTCGAGCCAACAAACAACC
CATCTTCCCAGCTACCGTACCGATGCAGTTTACAGCGGATCGCAAGTGGG
AGTCATTCGTTCAGCCGGTTCAGGTCTCCTACTCGTTGGACGTACGGCCG
CTGCCTGCTCGCCCTGGCGCTGATCTGGGCGATATCTACTACCTCAAGCT
CCGGCTTTTCGACCAGCACGGTCAAGCTGCCACGCAGAACTCCATCGCGA
TCAGTCTAATCAGAGACGCCCAGGGTGGTCTGCAGCTGGCGATGATCGAC
CCGAACGGTAGCCGCGATTACGGTCACGGAAACCGTGTATGGCGGATGAA
GGCCTGGAAGGAACAGCTCGAAACATACTACAACCATGCCAAGGAGGCCG
TCAAGAACTGCGTCAAGCCTGAACACCCGAAGCACGAACATGAACATGAA
CACTCCCACGAGCACCCTCACAAGACGGTTGGATCTTCTTCGGACTCCCA
CCCCCACCGCCGTCCTTCCTCCAACAAGTACTACCCCTCAAGCCAGAGCG
GCCACTTCTTCTGGACTGGACGTGAACAGAGCATCATGAAGATCGCTCGT
CCGGTCATCCTCCCCGCCCTGATGGGAATCATGGCTGGTGGAGTTGCCTG
CATTGTTGGATTCCTGCTGGGTCGTCTCATCATCTCTATCTACTTGTGCG
CGGCGAGCCGCCGGCAGCAGCAGCAGAACATTCCCATCATCCGCATCGAA
GAGGGCGAGCCTATCTCCGAGAAGGAAGCCCTTCTTGAACCCTACAGCGA
TCAGGAACCTAGACGCGCCAATCATTCCCATGATCTTTCTCTCTTTCATT
CCTTTCCTTACGTTCTCTTTCTCTCTCTCTTTACCCCTGACGTTCACCTG
TACATTACAGCCCTCTCCTTGTGTCTCTGTGTCGACGTTCATGATATCCA
ATGTAGCATAGCATACATACCCACGTGAATGTTGTTTCGCCTTCTATCCG
CAACGGGTGCCTTGTGCATCACTACTGCAGCTGCCGCGGCTCTACCTGCG
CCTCAACTGCGTTCTACCACTGGATCTCATCAAATCAACCTCCCTGCTAT
CCCCTGCGCTTTCTCCGACTCGACTTGCACTGAATCCTTCGACTCTGTTT
CACAACTGACCATCGACTTCTCCACCCAAAATGGCACCCTTCGAGCCAAC
AAACAACCCATCTTCCCAGCTACCGTACCGATGCAGTTTACAGCGGATCG
CAAGTGGGAGTCATTCGTTCAGCCGGTTCAGGTCTCCTACTCGTTGGACG
TACGGCCGCTGCCTGCTCGCCCTGGCGCTGATCTGGGCGATATCTACTAC
CTCAAGCTCCGGCTTTTCGACCAGCACGGTCAAGCTGCCACGCAGAACTC
CATCGCGATCAGTCTAATCAGAGACGCCCAGGGTGGTCTGCAGCTGGCGA
TGATCGACCCGAACGGTAGCCGCGATTACGGTCACGGAAACCGTGTATGG
CGGATGAAGGCCTGGAAGGAACAGCTCGAAACATACTACAACCATGCCAA
GGAGGCCGTCAAGAACTGCGTCAAGCCTGAACACCCGAAGCACGAACATG
AACATGAACACTCCCACGAGCACCCTCACAAGACGGTTGGATCTTCTTCG
GACTCCCACCCCCACCGCCGTCCTTCCTCCAACAAGTACTACCCCTCAAG
CCAGAGCGGCCACTTCTTCTGGACTGGACGTGAACAGAGCATCATGAAGA
TCGCTCGTCCGGTCATCCTCCCCGCCCTGATGGGAATCATGGCTGGTGGA
GTTGCCTGCATTGTTGGATTCCTGCTGGGTCGTCTCATCATCTCTATCTA
CTTGTGCGCGGCGAGCCGCCGGCAGCAGCAGCAGAACATTCCCATCATCC
GCATCGAAGAGGGCGAGCCTATCTCCGAGAAGGAAGCCCTTCTTGAACCC
TACAGCGATCAGGAACCTAGACGCGCCAATCATTCCCATGATCTTTCTCT
CTTTCATTCCTTTCCTTACGTTCTCTTTCTCTCTCTCTTTACCCCTGACG
TTCACCTGTACATTACAGCCCTCTCCTTGTGTCTCTGTGTCGACGTTCAT
GATATCCAATGTAGCATAGCATACATACCCACGTGAATGTTGTTTCGCCT
TCTATCCGCAACGGGTGCCTTGTGCATCACTACTGCAGCTGCCGCGGCTC
TACCTGCGCCTCAACTGCGTTCTACCACTGGATCTCATCAAATCAACCTC
CCTGCTATCCCCTGCGCTTTCTCCGACTCGACTTGCACTGAATCCTTCGA
CTCTGTTTCACAACTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:1972288..1973507 - |
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