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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:1982251..1983222+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005592-T1 ID=CBS51388_005592-T1|Name=CBS51388_005592-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=972bp|location=Sequence derived from alignment at An08:1982251..1983222+ (Aspergillus niger CBS 513.88)
ATGAACGTCGAGTTCCAAGGGACCCTCTCCAACCTGGAGAATAAACTAAA
TGTGCTCATAAATAGCCTGACAACATCACCAACAGCTGCAGGCGCCCCCG
CCGCTGCGATCGGTTTATTGGACGCCGACGACTCGCTGACCTCCGCCGTC
GAGACTCTCCGACAACATCAGCAGAACTACGCCAAGATCTTACGGCTCCG
TGAAGAGGCTCAGGAACTGGAAGATAAAGTCAAAAGCATTGTACGTGAGG
TGATGGCCTACGAAAAGGAAATCATAACCACTTGTGGAGACGAGTCCGAT
AGCGATCTGGACTCCGAGGATGATTACTCGGATTACGACTCGGACGAAAA
CATGGACGGTGAAAAGCCTAGGTCTACTGGGTTACGGGGGATCAAGGAGG
TGGACTACAAACTGCTTCTGGACTTTGCGCGGCGGATCAGCAAATACAAT
CACCAAGCGGCTGCCGATGCTGCAGCGACTGCAGAGGCCAAATCACGAGA
GAGGTTGCAAGAAACCAAGGGACCAGACACAGAAATGACGGGGACAAATG
GCAACCAGGATACGGAGGCAGCGGAACCGGTCGCATCTGTGACTAAAGAC
GCGACTAGTTGGCTTGACGAATCGGCGAAGATGACTCGCCAGGCTTATAT
GCTACCGTATCCAATGGAAGACCGCATTCGAATGGGGCTTATGGCGCAAA
TACAGCTTGCTGCTGCCGAGGGCCGCCCGGGATTTGAACCCGAGAAGGAA
GTTGAACGTTTGATACGCGAGGCCGAGGGTGTAGGGATCGCGGATGCGAT
GCCGCAGGTCGACGTCGGCGAAGAAGCGCGTCATGCAGATGAGGCCGCAA
AAGCAGCAGCGCATGCTGGATCCGCAGCAACAAGCGGATCTGGAATGGGA
GCCGCGTCATTGCCAAAACCTAAGGCTACATTGGACTTGGATCTGTACGA
CCCGGATGAAGACGACGAATGA back to topCoding sequence (CDS) from alignment at An08:1982251..1983222+ >CBS51388_005592-T1 ID=CBS51388_005592-T1|Name=CBS51388_005592-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=972bp|location=Sequence derived from alignment at An08:1982251..1983222+ (Aspergillus niger CBS 513.88)
ATGAACGTCGAGTTCCAAGGGACCCTCTCCAACCTGGAGAATAAACTAAA
TGTGCTCATAAATAGCCTGACAACATCACCAACAGCTGCAGGCGCCCCCG
CCGCTGCGATCGGTTTATTGGACGCCGACGACTCGCTGACCTCCGCCGTC
GAGACTCTCCGACAACATCAGCAGAACTACGCCAAGATCTTACGGCTCCG
TGAAGAGGCTCAGGAACTGGAAGATAAAGTCAAAAGCATTGTACGTGAGG
TGATGGCCTACGAAAAGGAAATCATAACCACTTGTGGAGACGAGTCCGAT
AGCGATCTGGACTCCGAGGATGATTACTCGGATTACGACTCGGACGAAAA
CATGGACGGTGAAAAGCCTAGGTCTACTGGGTTACGGGGGATCAAGGAGG
TGGACTACAAACTGCTTCTGGACTTTGCGCGGCGGATCAGCAAATACAAT
CACCAAGCGGCTGCCGATGCTGCAGCGACTGCAGAGGCCAAATCACGAGA
GAGGTTGCAAGAAACCAAGGGACCAGACACAGAAATGACGGGGACAAATG
GCAACCAGGATACGGAGGCAGCGGAACCGGTCGCATCTGTGACTAAAGAC
GCGACTAGTTGGCTTGACGAATCGGCGAAGATGACTCGCCAGGCTTATAT
GCTACCGTATCCAATGGAAGACCGCATTCGAATGGGGCTTATGGCGCAAA
TACAGCTTGCTGCTGCCGAGGGCCGCCCGGGATTTGAACCCGAGAAGGAA
GTTGAACGTTTGATACGCGAGGCCGAGGGTGTAGGGATCGCGGATGCGAT
GCCGCAGGTCGACGTCGGCGAAGAAGCGCGTCATGCAGATGAGGCCGCAA
AAGCAGCAGCGCATGCTGGATCCGCAGCAACAAGCGGATCTGGAATGGGA
GCCGCGTCATTGCCAAAACCTAAGGCTACATTGGACTTGGATCTGTACGA
CCCGGATGAAGACGACGAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016592 | mediator complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006357 | regulation of transcription by RNA polymerase II |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003712 | transcription coregulator activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR019258 |
| DBxref | PFAM:PF10018 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:1982251..1983222 + |
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