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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:2000914..2001875- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005601-T1 ID=CBS51388_005601-T1|Name=CBS51388_005601-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=962bp|location=Sequence derived from alignment at An08:2000914..2001875- (Aspergillus niger CBS 513.88)
ATGGGACAAGGCAGACTGCAAGACAAAATCGCTATTGTGACAGGTGGAGG
CTTCGGATTCGGGGAAGGAATCGTCCACAAATTCATTCTCGAAGGTGCCA
ATGTGGTGATCGTGGATCTCGATCAGGAAAATGGAAAACGAGTGCAGTGT
GCTCAGCCAAAGGGACGTGCAGTCTTCGTTCAAGGAGACGTATCTAGTGA
GTCTGACTGGGAGAGAGTGCGTGAGGTAGCACTGGAGAATTTTAAGAAGA
TCGATATCGTCGTCAATAATGCAGGGATTGTCCATGTAGTTCAGGTATTG
GAGACTTTTTTTCTTCCAGCTATGAAGTCCACTGACGGTCAAATTAGCCA
TCTCTAGAGACCTCGGAAACCATGCTAGACCGCATGTATAAAGTCAATGT
CAAGAGTATCTATCACTCGGCCAAGACAATTGCTCCCTACTTCCAGGCGC
AGGGTGGGGGTGTCTTCGTGAATATCTCAAGCATGAGCTCTATTCGTCCT
CGGCCGAAGTATGCTTGGTACTCCGCTACTAAAGGCGCAGTGAGTGCGGT
ACGTCTATCCTTCCTTTTCCACTTCAACTTTGTTCATGTAGAGACTCTTA
CGATATAATGGCCGTAGGCTACCAAAAGCTTGGCTGCAGAATTCGCGAAC
AATCACATTCGACTCAACACTGTGTGCCCTGTTGCGGGTGAAACTGGAAT
GTAAGCGTCAAGCTTGATTACCCGCTCTCCCAATAAAAGCGTCTCTACTA
CCTTGCATGAGGGCTAATACATGGCCAGGATGCCTCTGATTCTCGGCGGA
GAGGACACGCCCGAGAATAGGAGCATTGTTCTGTCCACCATCCCTATGGG
GCGATTTGCTACCCCGGCGGATGTTGCCAATGCCACTGCATTTCTGGCAA
GTGATGAGGCTTCGTTCATCACGGGAGTGGAATTAGCGGTAGATGGGGGA
AGATCATTGTGA back to topCoding sequence (CDS) from alignment at An08:2000914..2001875- >CBS51388_005601-T1 ID=CBS51388_005601-T1|Name=CBS51388_005601-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3048bp|location=Sequence derived from alignment at An08:2000914..2001875- (Aspergillus niger CBS 513.88)
GATGCCTCTGATTCTCGGCGGAGAGGACACGCCCGAGAATAGGAGCATTG
TTCTGTCCACCATCCCTATGGGGCGATTTGCTACCCCGGCGGATGTTGCC
AATGCCACTGCATTTCTGGCAAGTGATGAGGCTTCGTTCATCACGGGAGT
GGAATTAGCGGTAGATGGGGGAAGATCATTGTGAGCTACCAAAAGCTTGG
CTGCAGAATTCGCGAACAATCACATTCGACTCAACACTGTGTGCCCTGTT
GCGGGTGAAACTGGAATCCATCTCTAGAGACCTCGGAAACCATGCTAGAC
CGCATGTATAAAGTCAATGTCAAGAGTATCTATCACTCGGCCAAGACAAT
TGCTCCCTACTTCCAGGCGCAGGGTGGGGGTGTCTTCGTGAATATCTCAA
GCATGAGCTCTATTCGTCCTCGGCCGAAGTATGCTTGGTACTCCGCTACT
AAAGGCGCAGTGAGTGCGATGGGACAAGGCAGACTGCAAGACAAAATCGC
TATTGTGACAGGTGGAGGCTTCGGATTCGGGGAAGGAATCGTCCACAAAT
TCATTCTCGAAGGTGCCAATGTGGTGATCGTGGATCTCGATCAGGAAAAT
GGAAAACGAGTGCAGTGTGCTCAGCCAAAGGGACGTGCAGTCTTCGTTCA
AGGAGACGTATCTAGTGAGTCTGACTGGGAGAGAGTGCGTGAGGTAGCAC
TGGAGAATTTTAAGAAGATCGATATCGTCGTCAATAATGCAGGGATTGTC
CATGTAGTTCAGGATGCCTCTGATTCTCGGCGGAGAGGACACGCCCGAGA
ATAGGAGCATTGTTCTGTCCACCATCCCTATGGGGCGATTTGCTACCCCG
GCGGATGTTGCCAATGCCACTGCATTTCTGGCAAGTGATGAGGCTTCGTT
CATCACGGGAGTGGAATTAGCGGTAGATGGGGGAAGATCATTGTGAGCTA
CCAAAAGCTTGGCTGCAGAATTCGCGAACAATCACATTCGACTCAACACT
GTGTGCCCTGTTGCGGGTGAAACTGGAATCCATCTCTAGAGACCTCGGAA
ACCATGCTAGACCGCATGTATAAAGTCAATGTCAAGAGTATCTATCACTC
GGCCAAGACAATTGCTCCCTACTTCCAGGCGCAGGGTGGGGGTGTCTTCG
TGAATATCTCAAGCATGAGCTCTATTCGTCCTCGGCCGAAGTATGCTTGG
TACTCCGCTACTAAAGGCGCAGTGAGTGCGATGGGACAAGGCAGACTGCA
AGACAAAATCGCTATTGTGACAGGTGGAGGCTTCGGATTCGGGGAAGGAA
TCGTCCACAAATTCATTCTCGAAGGTGCCAATGTGGTGATCGTGGATCTC
GATCAGGAAAATGGAAAACGAGTGCAGTGTGCTCAGCCAAAGGGACGTGC
AGTCTTCGTTCAAGGAGACGTATCTAGTGAGTCTGACTGGGAGAGAGTGC
GTGAGGTAGCACTGGAGAATTTTAAGAAGATCGATATCGTCGTCAATAAT
GCAGGGATTGTCCATGTAGTTCAGGATGCCTCTGATTCTCGGCGGAGAGG
ACACGCCCGAGAATAGGAGCATTGTTCTGTCCACCATCCCTATGGGGCGA
TTTGCTACCCCGGCGGATGTTGCCAATGCCACTGCATTTCTGGCAAGTGA
TGAGGCTTCGTTCATCACGGGAGTGGAATTAGCGGTAGATGGGGGAAGAT
CATTGTGAGCTACCAAAAGCTTGGCTGCAGAATTCGCGAACAATCACATT
CGACTCAACACTGTGTGCCCTGTTGCGGGTGAAACTGGAATCCATCTCTA
GAGACCTCGGAAACCATGCTAGACCGCATGTATAAAGTCAATGTCAAGAG
TATCTATCACTCGGCCAAGACAATTGCTCCCTACTTCCAGGCGCAGGGTG
GGGGTGTCTTCGTGAATATCTCAAGCATGAGCTCTATTCGTCCTCGGCCG
AAGTATGCTTGGTACTCCGCTACTAAAGGCGCAGTGAGTGCGATGGGACA
AGGCAGACTGCAAGACAAAATCGCTATTGTGACAGGTGGAGGCTTCGGAT
TCGGGGAAGGAATCGTCCACAAATTCATTCTCGAAGGTGCCAATGTGGTG
ATCGTGGATCTCGATCAGGAAAATGGAAAACGAGTGCAGTGTGCTCAGCC
AAAGGGACGTGCAGTCTTCGTTCAAGGAGACGTATCTAGTGAGTCTGACT
GGGAGAGAGTGCGTGAGGTAGCACTGGAGAATTTTAAGAAGATCGATATC
GTCGTCAATAATGCAGGGATTGTCCATGTAGTTCAGGATGCCTCTGATTC
TCGGCGGAGAGGACACGCCCGAGAATAGGAGCATTGTTCTGTCCACCATC
CCTATGGGGCGATTTGCTACCCCGGCGGATGTTGCCAATGCCACTGCATT
TCTGGCAAGTGATGAGGCTTCGTTCATCACGGGAGTGGAATTAGCGGTAG
ATGGGGGAAGATCATTGTGAGCTACCAAAAGCTTGGCTGCAGAATTCGCG
AACAATCACATTCGACTCAACACTGTGTGCCCTGTTGCGGGTGAAACTGG
AATCCATCTCTAGAGACCTCGGAAACCATGCTAGACCGCATGTATAAAGT
CAATGTCAAGAGTATCTATCACTCGGCCAAGACAATTGCTCCCTACTTCC
AGGCGCAGGGTGGGGGTGTCTTCGTGAATATCTCAAGCATGAGCTCTATT
CGTCCTCGGCCGAAGTATGCTTGGTACTCCGCTACTAAAGGCGCAGTGAG
TGCGATGGGACAAGGCAGACTGCAAGACAAAATCGCTATTGTGACAGGTG
GAGGCTTCGGATTCGGGGAAGGAATCGTCCACAAATTCATTCTCGAAGGT
GCCAATGTGGTGATCGTGGATCTCGATCAGGAAAATGGAAAACGAGTGCA
GTGTGCTCAGCCAAAGGGACGTGCAGTCTTCGTTCAAGGAGACGTATCTA
GTGAGTCTGACTGGGAGAGAGTGCGTGAGGTAGCACTGGAGAATTTTAAG
AAGATCGATATCGTCGTCAATAATGCAGGGATTGTCCATGTAGTTCAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:2000914..2001875 - |
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