You are here

Home

CBS51388_005603-T1, CBS51388_005603-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005603-T1
Unique NameCBS51388_005603-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:2005037..2008112+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005603-T1 ID=CBS51388_005603-T1|Name=CBS51388_005603-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=3076bp|location=Sequence derived from alignment at An08:2005037..2008112+ (Aspergillus niger CBS 513.88)
ATGGCCGAGGAGCAGTTCACCCCGCTCTTACGGTGGCAGGTAGTGGCCGT
TCCTTCTGGCCATCCTGCTACAGAGCTTGACCGCATCCATCAAGACACCA
TTCAGCTTATGAAAAATATTGTTGAGTCTATAAGAGTCGATCTCAAGGCT
ACAAAAGGGCGTCGCCTAATCCGGAGACTCCGATGGGCTTCTCAGAGAGG
GAAGGTTATTGGAAAATTTCAACAGCTATCAAACCAACGAGTTGCTGTGA
TCCAGCAACACATAGAGATTGAGAAAGCGTAAGTGTTTCTCCACACATTT
GAGTGGCTGAATCTACTGACCGGGGTTAAAGTCTGCGTTATATACCATAT
CCCAGAAGAGAACCGACAGAAGATCCGAGGGATCACTAGGATATATATAT
ATATAAACTATTTTCGGCTGGAAATGCCATCACCTATATGTCTTTTCATC
ACAGCATTCTTGTTCCACGTTCACTACTTGTATCTCAATATTCTACTGGC
TCCCTGTGTAATAGTACAGTTGCATGCAAGATAAGCTCATTCCCACGAGA
TAATGTGTGTTTTGGTCAAGCCGATTTCGAAAATGACATAAATGCCGAGT
ACTTTCACAGCCCCTATGACTCGAGTATCGAAGACATTTGCATACCTAGA
CCGTGGGTATCCGTATGAAAAAATATTTGCCACTAGCGGATATACTGGGA
GCCTATTTAGTGGTGCTGATGGTTGCCTTGATCACGACAATTGGATAGAA
AGAGTATTTATCTTCAGTTGCATAATTGGATATGAGCTTACTTCTGACCC
AGCTTACGATGATGTGCGACCAGGGAGTTCCAACGCCTGTAATGCAGAGA
AGCAGGCGATGGCTAACGAAGACGAGAGTCTAACAGTAAAGTGTGGATAT
TCACTAGAAAACTGGAAGAGCAAAACAACTATATACATCCAGAATAATCA
TGTATGTTTAGACTGTGGCAGATTTCGGAGTTTGATTGAAATCAAAACTA
GGATCTCTTTTCTCCTGAAGACCTGCTAGGATACTCATCATGACTCTCAG
CCTTTTCCAACGACAAATTGCCAAGGTTACAGACATTATCTGGACATGTG
TTTAGATCAAGCCGAATATTCCAGAATCGTATTTTATCATGGTACATGTA
TTGTAAATAAAAATTTGTAGCGTGAGGTACAGAATAATTTCCGCATTAAC
ATTATTCCTACACTATTCTATATTTACATTAGTGATGCCAGTGTCGATAC
TAACACGGTGGTGAAGGATATTGAAGAGGCTGGCGCAATAGGTGCTGGAG
GGATGGAGCTCCTCGGCCTCTACAACTACGGCGGTTCGCTGGCACCACAG
CCCGCTGGTGCCGACTGGGCTACGTATGGCTTTGGTACACCGGCATTCAA
CGCCATTTTCAAGGCCTCACTGCAGAGTGCAAAGAGCACAGGCATGATCT
TTGACTTTGCTCTGGGTCCGAGTCAAGGTCAAGGCGTTCCAGCCAATCCA
AATGATGAGGGGCTTCATTGGGATTTGGTAGGATACCCTTCAAATAGAAT
GTCTTGACGTAATCTGATATTCCAAGGCACCATTTAATGTCAGTGTTCCG
CCGAATGGCGCATACAACGGTCAAATTCTCGGTTGGGGAACAGGTGAACT
TGTTTCTCTGGTGTCCGCGCGGGTCGTGAACACCTCTACAGTTGTCAATC
CCGCGAGCAGTCTCTTTTCCACCCCTGCAAATAACGCAACACGCTTGGTC
CTGGCAGCAGGATCACTAGTGGATCATACAGATGCGGTCAGTGTTGATGG
AAAAGTTTCGCTGTCATTCAATGTTAGCGAACATTCAACCTATCGTCTTT
TTGCCTACTATCAGTACCAGGACCTTGTTAAAAACCTTGACATCCACGAA
AGCTCTACAGGAAGCATTTTCGATAATGGCTCCTACACAGTTGATCACTT
CAGCGCTCGTGGTGCTCAAACTACGATTGACTTTTGGGAGAACTACATCT
TGAATGATACTGATATCAAGTCCCTTTTCCAAGAGGTCGGCCGCTATGGC
TGGGAAGACAGCATCGAAATCAAGTCTAACATTTCCTGGTCACCTTCCCT
TCCAGGTATTTTCGAGCAGATCAACGGCTATCAGCTGGGCAAGTACCTTC
CTCTCGTCATGTACGGAAATAATAACCCCGGCGTGCAGCCGTCATACCCT
GGTAATCTGGAATGCGTCTTGGACCGTGAGAATCAGGGACAAGGCTACGT
CAATGACTTCCGTGATGCTCTAGAAAAAGGATATCAAGTTTACTTGGACA
CGCTTTCAGCCTGGCTAGAGGGTCTGGGCTTAGGCTACTCAGCCCAAGTC
TCCTACAACCTGCCGATCAACATGGAAGTAAATATCAATCATGTCCTCGC
CCCGGAGTGTGAGAGTCTTGCGTTCAACAATAACATCGATGGATATCGTC
AGTTTTCGGGCGTCGCAAATCTCGCTAATCTCGCTCAGAAGAACGTGATT
CCGAATGAAATGGGCGCTAACTTAGAAAAGGCATTTGCTCTTCCGGTCAG
TGAGCTACTTGGGCAGATCAATACAGCTTTTGCCGGTGGCGTCAATCAGA
TTGTGTTACACGGCCAGTCATATACTGGTGACTACCACAAGACAACGTGG
CCGGGGTATACATTTTTCTTCATACTTACTGCAGAATCCTACTATAACAA
GCAGCCTGCATGGGGCCATGGGTTCTCAGACGTTATTAATTATATCAGCC
GGAATCAGTATATCTTGCAGGCTGGCCAGCCACGAACCGACATTATTCTG
TATAATAGAGTTTCAATGACTGATCTTCAGCTTGAGGCTTTGTACTCTGC
CAATAATATGATTAATACAGATTATACTTACACTTATCTATCACCTGCAA
ACTCGAATCTCTCGCAAGCATCTGTGGCAGGCGGCCTTTTGGCCCCTCAT
TCCCCCGCCTACAAAGCAATTGTCGTAACAAGCGATCAGAATGTCACTTT
GGCTGGTGTCAATAAGCTCCAACAGTACGCCGATGCCGGACTCCCCGTCA
TTCTGAGTGGCGGTTCTCCGGGATAA
back to top

Coding sequence (CDS) from alignment at An08:2005037..2008112+

>CBS51388_005603-T1 ID=CBS51388_005603-T1|Name=CBS51388_005603-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6219bp|location=Sequence derived from alignment at An08:2005037..2008112+ (Aspergillus niger CBS 513.88)
ATGGCCGAGGAGCAGTTCACCCCGCTCTTACGGTGGCAGGTAGTGGCCGT
TCCTTCTGGCCATCCTGCTACAGAGCTTGACCGCATCCATCAAGACACCA
TTCAGCTTATGAAAAATATTGTTGAGTCTATAAGAGTCGATCTCAAGGCT
ACAAAAGGGCGTCGCCTAATCCGGAGACTCCGATGGGCTTCTCAGAGAGG
GAAGGTTATTGGAAAATTTCAACAGCTATCAAACCAACGAGTTGCTGTGA
TCCAGCAACACATAGAGATTGAGAAAGCTGATGCCAGTGTCGATACTAAC
ACGGTGGTGAAGGATATTGAAGAGGCTGGCGCAATAGGTGCTGGAGGGAT
GGAGCTCCTCGGCCTCTACAACTACGGCGGTTCGCTGGCACCACAGCCCG
CTGGTGCCGACTGGGCTACGTATGGCTTTGGTACACCGGCATTCAACGCC
ATTTTCAAGGCCTCACTGCAGAGTGCAAAGAGCACAGGCATGATCTTTGA
CTTTGCTCTGGGTCCGAGTCAAGGTCAAGGCGTTCCAGCCAATCCAAATG
ATGAGGGGCTTCATTGGGATTTGGCACCATTTAATGTCAGTGTTCCGCCG
AATGGCGCATACAACGGTCAAATTCTCGGTTGGGGAACAGGTGAACTTGT
TTCTCTGGTGTCCGCGCGGGTCGTGAACACCTCTACAGTTGTCAATCCCG
CGAGCAGTCTCTTTTCCACCCCTGCAAATAACGCAACACGCTTGGTCCTG
GCAGCAGGATCACTAGTGGATCATACAGATGCGGTCAGTGTTGATGGAAA
AGTTTCGCTGTCATTCAATGTTAGCGAACATTCAACCTATCGTCTTTTTG
CCTACTATCAGTACCAGGACCTTGTTAAAAACCTTGACATCCACGAAAGC
TCTACAGGAAGCATTTTCGATAATGGCTCCTACACAGTTGATCACTTCAG
CGCTCGTGGTGCTCAAACTACGATTGACTTTTGGGAGAACTACATCTTGA
ATGATACTGATATCAAGTCCCTTTTCCAAGAGGTCGGCCGCTATGGCTGG
GAAGACAGCATCGAAATCAAGTCTAACATTTCCTGGTCACCTTCCCTTCC
AGGTATTTTCGAGCAGATCAACGGCTATCAGCTGGGCAAGTACCTTCCTC
TCGTCATGTACGGAAATAATAACCCCGGCGTGCAGCCGTCATACCCTGGT
AATCTGGAATGCGTCTTGGACCGTGAGAATCAGGGACAAGGCTACGTCAA
TGACTTCCGTGATGCTCTAGAAAAAGGATATCAAGTTTACTTGGACACGC
TTTCAGCCTGGCTAGAGGGTCTGGGCTTAGGCTACTCAGCCCAAGTCTCC
TACAACCTGCCGATCAACATGGAAGTAAATATCAATCATGTCCTCGCCCC
GGAGTGTGAGAGTCTTGCGTTCAACAATAACATCGATGGATATCGTCAGT
TTTCGGGCGTCGCAAATCTCGCTAATCTCGCTCAGAAGAACGTGATTCCG
AATGAAATGGGCGCTAACTTAGAAAAGGCATTTGCTCTTCCGGTCAGTGA
GCTACTTGGGCAGATCAATACAGCTTTTGCCGGTGGCGTCAATCAGATTG
TGTTACACGGCCAGTCATATACTGGTGACTACCACAAGACAACGTGGCCG
GGGTATACATTTTTCTTCATACTTACTGCAGAATCCTACTATAACAAGCA
GCCTGCATGGGGCCATGGGTTCTCAGACGTTATTAATTATATCAGCCGGA
ATCAGTATATCTTGCAGGCTGGCCAGCCACGAACCGACATTATTCTGTAT
AATAGAGTTTCAATGACTGATCTTCAGCTTGAGGCTTTGTACTCTGCCAA
TAATATGATTAATACAGATTATACTTACACTTATCTATCACCTGCAAACT
CGAATCTCTCGCAAGCATCTGTGGCAGGCGGCCTTTTGGCCCCTCATTCC
CCCGCCTACAAAGCAATTGTCGTAACAAGCGATCAGAATGTCACTTTGGC
TGGTGTCAATAAGCTCCAACAGTACGCCGATGCCGGACTCCCCGTCATTC
TGAGTGGCGGTTCTCCGGGATAAATGGCCGAGGAGCAGTTCACCCCGCTC
TTACGGTGGCAGGTAGTGGCCGTTCCTTCTGGCCATCCTGCTACAGAGCT
TGACCGCATCCATCAAGACACCATTCAGCTTATGAAAAATATTGTTGAGT
CTATAAGAGTCGATCTCAAGGCTACAAAAGGGCGTCGCCTAATCCGGAGA
CTCCGATGGGCTTCTCAGAGAGGGAAGGTTATTGGAAAATTTCAACAGCT
ATCAAACCAACGAGTTGCTGTGATCCAGCAACACATAGAGATTGAGAAAG
CTGATGCCAGTGTCGATACTAACACGGTGGTGAAGGATATTGAAGAGGCT
GGCGCAATAGGTGCTGGAGGGATGGAGCTCCTCGGCCTCTACAACTACGG
CGGTTCGCTGGCACCACAGCCCGCTGGTGCCGACTGGGCTACGTATGGCT
TTGGTACACCGGCATTCAACGCCATTTTCAAGGCCTCACTGCAGAGTGCA
AAGAGCACAGGCATGATCTTTGACTTTGCTCTGGGTCCGAGTCAAGGTCA
AGGCGTTCCAGCCAATCCAAATGATGAGGGGCTTCATTGGGATTTGGCAC
CATTTAATGTCAGTGTTCCGCCGAATGGCGCATACAACGGTCAAATTCTC
GGTTGGGGAACAGGTGAACTTGTTTCTCTGGTGTCCGCGCGGGTCGTGAA
CACCTCTACAGTTGTCAATCCCGCGAGCAGTCTCTTTTCCACCCCTGCAA
ATAACGCAACACGCTTGGTCCTGGCAGCAGGATCACTAGTGGATCATACA
GATGCGGTCAGTGTTGATGGAAAAGTTTCGCTGTCATTCAATGTTAGCGA
ACATTCAACCTATCGTCTTTTTGCCTACTATCAGTACCAGGACCTTGTTA
AAAACCTTGACATCCACGAAAGCTCTACAGGAAGCATTTTCGATAATGGC
TCCTACACAGTTGATCACTTCAGCGCTCGTGGTGCTCAAACTACGATTGA
CTTTTGGGAGAACTACATCTTGAATGATACTGATATCAAGTCCCTTTTCC
AAGAGGTCGGCCGCTATGGCTGGGAAGACAGCATCGAAATCAAGTCTAAC
ATTTCCTGGTCACCTTCCCTTCCAGGTATTTTCGAGCAGATCAACGGCTA
TCAGCTGGGCAAGTACCTTCCTCTCGTCATGTACGGAAATAATAACCCCG
GCGTGCAGCCGTCATACCCTGGTAATCTGGAATGCGTCTTGGACCGTGAG
AATCAGGGACAAGGCTACGTCAATGACTTCCGTGATGCTCTAGAAAAAGG
ATATCAAGTTTACTTGGACACGCTTTCAGCCTGGCTAGAGGGTCTGGGCT
TAGGCTACTCAGCCCAAGTCTCCTACAACCTGCCGATCAACATGGAAGTA
AATATCAATCATGTCCTCGCCCCGGAGTGTGAGAGTCTTGCGTTCAACAA
TAACATCGATGGATATCGTCAGTTTTCGGGCGTCGCAAATCTCGCTAATC
TCGCTCAGAAGAACGTGATTCCGAATGAAATGGGCGCTAACTTAGAAAAG
GCATTTGCTCTTCCGGTCAGTGAGCTACTTGGGCAGATCAATACAGCTTT
TGCCGGTGGCGTCAATCAGATTGTGTTACACGGCCAGTCATATACTGGTG
ACTACCACAAGACAACGTGGCCGGGGTATACATTTTTCTTCATACTTACT
GCAGAATCCTACTATAACAAGCAGCCTGCATGGGGCCATGGGTTCTCAGA
CGTTATTAATTATATCAGCCGGAATCAGTATATCTTGCAGGCTGGCCAGC
CACGAACCGACATTATTCTGTATAATAGAGTTTCAATGACTGATCTTCAG
CTTGAGGCTTTGTACTCTGCCAATAATATGATTAATACAGATTATACTTA
CACTTATCTATCACCTGCAAACTCGAATCTCTCGCAAGCATCTGTGGCAG
GCGGCCTTTTGGCCCCTCATTCCCCCGCCTACAAAGCAATTGTCGTAACA
AGCGATCAGAATGTCACTTTGGCTGGTGTCAATAAGCTCCAACAGTACGC
CGATGCCGGACTCCCCGTCATTCTGAGTGGCGGTTCTCCGGGATAAATGG
CCGAGGAGCAGTTCACCCCGCTCTTACGGTGGCAGGTAGTGGCCGTTCCT
TCTGGCCATCCTGCTACAGAGCTTGACCGCATCCATCAAGACACCATTCA
GCTTATGAAAAATATTGTTGAGTCTATAAGAGTCGATCTCAAGGCTACAA
AAGGGCGTCGCCTAATCCGGAGACTCCGATGGGCTTCTCAGAGAGGGAAG
GTTATTGGAAAATTTCAACAGCTATCAAACCAACGAGTTGCTGTGATCCA
GCAACACATAGAGATTGAGAAAGCTGATGCCAGTGTCGATACTAACACGG
TGGTGAAGGATATTGAAGAGGCTGGCGCAATAGGTGCTGGAGGGATGGAG
CTCCTCGGCCTCTACAACTACGGCGGTTCGCTGGCACCACAGCCCGCTGG
TGCCGACTGGGCTACGTATGGCTTTGGTACACCGGCATTCAACGCCATTT
TCAAGGCCTCACTGCAGAGTGCAAAGAGCACAGGCATGATCTTTGACTTT
GCTCTGGGTCCGAGTCAAGGTCAAGGCGTTCCAGCCAATCCAAATGATGA
GGGGCTTCATTGGGATTTGGCACCATTTAATGTCAGTGTTCCGCCGAATG
GCGCATACAACGGTCAAATTCTCGGTTGGGGAACAGGTGAACTTGTTTCT
CTGGTGTCCGCGCGGGTCGTGAACACCTCTACAGTTGTCAATCCCGCGAG
CAGTCTCTTTTCCACCCCTGCAAATAACGCAACACGCTTGGTCCTGGCAG
CAGGATCACTAGTGGATCATACAGATGCGGTCAGTGTTGATGGAAAAGTT
TCGCTGTCATTCAATGTTAGCGAACATTCAACCTATCGTCTTTTTGCCTA
CTATCAGTACCAGGACCTTGTTAAAAACCTTGACATCCACGAAAGCTCTA
CAGGAAGCATTTTCGATAATGGCTCCTACACAGTTGATCACTTCAGCGCT
CGTGGTGCTCAAACTACGATTGACTTTTGGGAGAACTACATCTTGAATGA
TACTGATATCAAGTCCCTTTTCCAAGAGGTCGGCCGCTATGGCTGGGAAG
ACAGCATCGAAATCAAGTCTAACATTTCCTGGTCACCTTCCCTTCCAGGT
ATTTTCGAGCAGATCAACGGCTATCAGCTGGGCAAGTACCTTCCTCTCGT
CATGTACGGAAATAATAACCCCGGCGTGCAGCCGTCATACCCTGGTAATC
TGGAATGCGTCTTGGACCGTGAGAATCAGGGACAAGGCTACGTCAATGAC
TTCCGTGATGCTCTAGAAAAAGGATATCAAGTTTACTTGGACACGCTTTC
AGCCTGGCTAGAGGGTCTGGGCTTAGGCTACTCAGCCCAAGTCTCCTACA
ACCTGCCGATCAACATGGAAGTAAATATCAATCATGTCCTCGCCCCGGAG
TGTGAGAGTCTTGCGTTCAACAATAACATCGATGGATATCGTCAGTTTTC
GGGCGTCGCAAATCTCGCTAATCTCGCTCAGAAGAACGTGATTCCGAATG
AAATGGGCGCTAACTTAGAAAAGGCATTTGCTCTTCCGGTCAGTGAGCTA
CTTGGGCAGATCAATACAGCTTTTGCCGGTGGCGTCAATCAGATTGTGTT
ACACGGCCAGTCATATACTGGTGACTACCACAAGACAACGTGGCCGGGGT
ATACATTTTTCTTCATACTTACTGCAGAATCCTACTATAACAAGCAGCCT
GCATGGGGCCATGGGTTCTCAGACGTTATTAATTATATCAGCCGGAATCA
GTATATCTTGCAGGCTGGCCAGCCACGAACCGACATTATTCTGTATAATA
GAGTTTCAATGACTGATCTTCAGCTTGAGGCTTTGTACTCTGCCAATAAT
ATGATTAATACAGATTATACTTACACTTATCTATCACCTGCAAACTCGAA
TCTCTCGCAAGCATCTGTGGCAGGCGGCCTTTTGGCCCCTCATTCCCCCG
CCTACAAAGCAATTGTCGTAACAAGCGATCAGAATGTCACTTTGGCTGGT
GTCAATAAGCTCCAACAGTACGCCGATGCCGGACTCCCCGTCATTCTGAG
TGGCGGTTCTCCGGGATAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005603CBS51388_005603Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005603-T1.exon1CBS51388_005603-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_005603-T1.exon2CBS51388_005603-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_005603-T1.exon3CBS51388_005603-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005603-T1.cdsCBS51388_005603-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005603-T1CBS51388_005603-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteCAZy:GH106
DBxrefPFAM:PF17132
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:2005037..2008112 +
Powered by Drupal