You are here

Home

CBS51388_005609-T1, CBS51388_005609-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005609-T1
Unique NameCBS51388_005609-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:2022939..2023350+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005609-T1 ID=CBS51388_005609-T1|Name=CBS51388_005609-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=412bp|location=Sequence derived from alignment at An08:2022939..2023350+ (Aspergillus niger CBS 513.88)
ATGACCCCCAACGAACTCCGCGACTGGCTCAAGGGCACGCAATCGCAGTC
CTCCGGCTGGACGAACGAGTCCTCCTCGTCAGGAGAGACAATCGGACATG
AAAGGCATACCTCCACCTCCAACCTTTCTCCACTACTACCCTGATCCGAA
ACCTTCCATCTTCTTCATTATTTGAGCTAACGGTATGTCTACGATTATAT
GGTGTTGCAGCGGCCGCAAAATCGTCTCTATCCTCGAACATAACCCGTCC
AAAGACCCATCGGGGTACTCGGACGAAGACGTCGTTCATATGCGCAAGGT
AGTGTCGTACTGTAAACGGCATTTGGCGCAGGAGGAAACGGCGAAGCAGA
ATACGGATAGTAAGAGTTATAAGTCGTTGAAGAATTGGGGACATGATCCG
TTGAAGGGATAA
back to top

Coding sequence (CDS) from alignment at An08:2022939..2023350+

>CBS51388_005609-T1 ID=CBS51388_005609-T1|Name=CBS51388_005609-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=558bp|location=Sequence derived from alignment at An08:2022939..2023350+ (Aspergillus niger CBS 513.88)
ATGACCCCCAACGAACTCCGCGACTGGCTCAAGGGCACGCAATCGCAGTC
CTCCGGCTGGACGAACGAGTCCTCCTCCGGCCGCAAAATCGTCTCTATCC
TCGAACATAACCCGTCCAAAGACCCATCGGGGTACTCGGACGAAGACGTC
GTTCATATGCGCAAGGTAGTGTCGTACTGTAAACGGCATTTGGCGCAGGA
GGAAACGGCGAAGCAGAATACGGATAGTAAGAGTTATAAGTCGTTGAAGA
ATTGGGGACATGATCCGTTGAAGGGATAAATGACCCCCAACGAACTCCGC
GACTGGCTCAAGGGCACGCAATCGCAGTCCTCCGGCTGGACGAACGAGTC
CTCCTCCGGCCGCAAAATCGTCTCTATCCTCGAACATAACCCGTCCAAAG
ACCCATCGGGGTACTCGGACGAAGACGTCGTTCATATGCGCAAGGTAGTG
TCGTACTGTAAACGGCATTTGGCGCAGGAGGAAACGGCGAAGCAGAATAC
GGATAGTAAGAGTTATAAGTCGTTGAAGAATTGGGGACATGATCCGTTGA
AGGGATAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005609CBS51388_005609Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005609-T1.exon1CBS51388_005609-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_005609-T1.exon2CBS51388_005609-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005609-T1.cdsCBS51388_005609-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005609-T1CBS51388_005609-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR021487
DBxrefPFAM:PF11338
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:2022939..2023350 +
Powered by Drupal