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CBS51388_005614-T1, CBS51388_005614-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005614-T1
Unique NameCBS51388_005614-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:2043025..2044839+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005614-T1 ID=CBS51388_005614-T1|Name=CBS51388_005614-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1815bp|location=Sequence derived from alignment at An08:2043025..2044839+ (Aspergillus niger CBS 513.88)
ATGCAGGCCTATCTTCAGTACCGCCGCATTGGCCATGCCGTGCGCCAACA
GCTCGAAGATTTCCCGGAGTTTGCCCGACCAGGCGTCGCCAAAGATGACC
TGCCGGAGGGGATCCCCAGAGATGCTCCCAACGCAGTTTCGCGCCGCCGT
TCCAGTCCGCTGCTGCCGGGCGTGCAGCTGAAGGACGTAGTCGACAACGA
TGGCTCGTCCTCGTCCGTCTTGCTCGTCGACTGGGACGGTGACCATGATC
CCATCAATCCGCGCAACTACAGCCGCGCCACCCGCATCGGCGCAACCCTG
ATGGTGTCCGCGCTGGGTTTCGCCGTGGGTGCGGCCTCGTCCATCGAATC
TGGCGTGCTTCCCCAGAACGCAGCAGCCTTTAACATCAGCGATGTCGTCG
CATCGCTCGCAACGGGCATGTATCTGCTTGGCTTCGCAGCAGGCTCGCTC
GTCTCTGGACCTCTGTCCGAAATTCTAGGCCGCAATGCCGTCTACACCGG
CTCCCTCACGCTATTCATGATCTTCGTCATGGCCTCAGGACTGGCCCCCA
ATATCGGCGCACAGCTCGCTTTCCGCTTCCTGGCTGGCATCTTCGGCTGT
CCACCATTAACCTGCGCCGGCGGCACCATCGCCGACCTCTGGAACCCCCT
GGAGAAAACCCTCTTCTTCCCTCTCTACGCCATCCTCTCCTTCGGCGGGC
CCGTCCTCGGCCCTGTCATCGCCTCCTACATGGGCGAAGGCACCCTTTCC
TGGCGCTGGACCAACTGGATCATCCTCATTCTGGCAGGCTTCATCCTGGC
TCTGATCCTCCTGCTGCAGCCCGAGACCTACGGCCCCCTACTCCTGAAAT
GGAAGGCGCACCATCTCCGCCAGCAAACGGGCGACAATCGCTACCGCTCA
TCAATGGATCTGCAGGAGACGGCGCTGTTCTCTCGCATCGGAACCGCCTG
CATGCGACAATTCGCCCTGACCATCCACGAACCCATCATCCTGCTAATCT
CCCTCTACATGACCGTCATCTACATCGTACTCTTCACTTTCTTCGACGGA
TACACGTATATTTTAGCGACGTGCACGGCCTCTCCAAGGCCTGACCACAT
CGTCTGGGTCGCCATGTACGTCGGCATTTCAATGGCCGGACTCTTCGTCC
CCGTCGTGTACGTCTGGACAAAGCGCGAATTCTCCGACGCGGCTGCATCC
GCTGCTGCATCTGCAGCGGCTTCCCCCCGATCGGCCAGTTCGGAAATAGT
CACTGCCGATCCCAACGCCAATGGCGCCGATACCTCTGAGAAACCGAACC
TCGACGACGATGATACTCAAAAACCCACCCAGCAACACAAGCACGTCGCT
CGTCCCGAGAACCGTCTCTGGTTCGCCATGCTCGGTGCCCCCGCCATTCC
CATTGGGTTATTCTGGATGGGATGGACTGACTACGTACACCTCCCCCCCC
TCTCTCACCCCCAGTTCTAAAACAATACTAACATGATGAACAAATAGAGC
TCAATTTCAATCTGGTCCCCCATCATCGCATCCACCGTCTTCGGCTTCGG
CACCATCTGCGTCTTCATCTCCTCGTACATGTACGTCATCGACGCATACG
ACATCTACGCCGCCTCTGCGCTGGGCTTCATGACGGTATCGCGCTACTGT
GCGGCAGGCGGGATGACGGTCGTGGGGATCCCGTTTTATAGTAATATGGG
GGTGCATTGGACGTTGACGATCTTGGGGGCGATTAGTGCGTTGATGACTC
CTGTGCCGTATGTGTTTTATCGCTATGGAGTGGTGATTCGGGGGTGGAGT
CGGTATGCGGTTTAG
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Coding sequence (CDS) from alignment at An08:2043025..2044839+

>CBS51388_005614-T1 ID=CBS51388_005614-T1|Name=CBS51388_005614-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3504bp|location=Sequence derived from alignment at An08:2043025..2044839+ (Aspergillus niger CBS 513.88)
ATGCAGGCCTATCTTCAGTACCGCCGCATTGGCCATGCCGTGCGCCAACA
GCTCGAAGATTTCCCGGAGTTTGCCCGACCAGGCGTCGCCAAAGATGACC
TGCCGGAGGGGATCCCCAGAGATGCTCCCAACGCAGTTTCGCGCCGCCGT
TCCAGTCCGCTGCTGCCGGGCGTGCAGCTGAAGGACGTAGTCGACAACGA
TGGCTCGTCCTCGTCCGTCTTGCTCGTCGACTGGGACGGTGACCATGATC
CCATCAATCCGCGCAACTACAGCCGCGCCACCCGCATCGGCGCAACCCTG
ATGGTGTCCGCGCTGGGTTTCGCCGTGGGTGCGGCCTCGTCCATCGAATC
TGGCGTGCTTCCCCAGAACGCAGCAGCCTTTAACATCAGCGATGTCGTCG
CATCGCTCGCAACGGGCATGTATCTGCTTGGCTTCGCAGCAGGCTCGCTC
GTCTCTGGACCTCTGTCCGAAATTCTAGGCCGCAATGCCGTCTACACCGG
CTCCCTCACGCTATTCATGATCTTCGTCATGGCCTCAGGACTGGCCCCCA
ATATCGGCGCACAGCTCGCTTTCCGCTTCCTGGCTGGCATCTTCGGCTGT
CCACCATTAACCTGCGCCGGCGGCACCATCGCCGACCTCTGGAACCCCCT
GGAGAAAACCCTCTTCTTCCCTCTCTACGCCATCCTCTCCTTCGGCGGGC
CCGTCCTCGGCCCTGTCATCGCCTCCTACATGGGCGAAGGCACCCTTTCC
TGGCGCTGGACCAACTGGATCATCCTCATTCTGGCAGGCTTCATCCTGGC
TCTGATCCTCCTGCTGCAGCCCGAGACCTACGGCCCCCTACTCCTGAAAT
GGAAGGCGCACCATCTCCGCCAGCAAACGGGCGACAATCGCTACCGCTCA
TCAATGGATCTGCAGGAGACGGCGCTGTTCTCTCGCATCGGAACCGCCTG
CATGCGACAATTCGCCCTGACCATCCACGAACCCATCATCCTGCTAATCT
CCCTCTACATGACCGTCATCTACATCGTACTCTTCACTTTCTTCGACGGA
TACACGTATATTTTAGCGACGTGCACGGCCTCTCCAAGGCCTGACCACAT
CGTCTGGGTCGCCATGTACGTCGGCATTTCAATGGCCGGACTCTTCGTCC
CCGTCGTGTACGTCTGGACAAAGCGCGAATTCTCCGACGCGGCTGCATCC
GCTGCTGCATCTGCAGCGGCTTCCCCCCGATCGGCCAGTTCGGAAATAGT
CACTGCCGATCCCAACGCCAATGGCGCCGATACCTCTGAGAAACCGAACC
TCGACGACGATGATACTCAAAAACCCACCCAGCAACACAAGCACGTCGCT
CGTCCCGAGAACCGTCTCTGGTTCGCCATGCTCGGTGCCCCCGCCATTCC
CATTGGGTTATTCTGGATGGGATGGACTGACTACAGCTCAATTTCAATCT
GGTCCCCCATCATCGCATCCACCGTCTTCGGCTTCGGCACCATCTGCGTC
TTCATCTCCTCGTACATGTACGTCATCGACGCATACGACATCTACGCCGC
CTCTGCGCTGGGCTTCATGACGGTATCGCGCTACTGTGCGGCAGGCGGGA
TGACGGTCGTGGGGATCCCGTTTTATAGTAATATGGGGGTGCATTGGACG
TTGACGATCTTGGGGGCGATTAGTGCGTTGATGACTCCTGTGCCGTATGT
GTTTTATCGCTATGGAGTGGTGATTCGGGGGTGGAGTCGGTATGCGGTTT
AGATGCAGGCCTATCTTCAGTACCGCCGCATTGGCCATGCCGTGCGCCAA
CAGCTCGAAGATTTCCCGGAGTTTGCCCGACCAGGCGTCGCCAAAGATGA
CCTGCCGGAGGGGATCCCCAGAGATGCTCCCAACGCAGTTTCGCGCCGCC
GTTCCAGTCCGCTGCTGCCGGGCGTGCAGCTGAAGGACGTAGTCGACAAC
GATGGCTCGTCCTCGTCCGTCTTGCTCGTCGACTGGGACGGTGACCATGA
TCCCATCAATCCGCGCAACTACAGCCGCGCCACCCGCATCGGCGCAACCC
TGATGGTGTCCGCGCTGGGTTTCGCCGTGGGTGCGGCCTCGTCCATCGAA
TCTGGCGTGCTTCCCCAGAACGCAGCAGCCTTTAACATCAGCGATGTCGT
CGCATCGCTCGCAACGGGCATGTATCTGCTTGGCTTCGCAGCAGGCTCGC
TCGTCTCTGGACCTCTGTCCGAAATTCTAGGCCGCAATGCCGTCTACACC
GGCTCCCTCACGCTATTCATGATCTTCGTCATGGCCTCAGGACTGGCCCC
CAATATCGGCGCACAGCTCGCTTTCCGCTTCCTGGCTGGCATCTTCGGCT
GTCCACCATTAACCTGCGCCGGCGGCACCATCGCCGACCTCTGGAACCCC
CTGGAGAAAACCCTCTTCTTCCCTCTCTACGCCATCCTCTCCTTCGGCGG
GCCCGTCCTCGGCCCTGTCATCGCCTCCTACATGGGCGAAGGCACCCTTT
CCTGGCGCTGGACCAACTGGATCATCCTCATTCTGGCAGGCTTCATCCTG
GCTCTGATCCTCCTGCTGCAGCCCGAGACCTACGGCCCCCTACTCCTGAA
ATGGAAGGCGCACCATCTCCGCCAGCAAACGGGCGACAATCGCTACCGCT
CATCAATGGATCTGCAGGAGACGGCGCTGTTCTCTCGCATCGGAACCGCC
TGCATGCGACAATTCGCCCTGACCATCCACGAACCCATCATCCTGCTAAT
CTCCCTCTACATGACCGTCATCTACATCGTACTCTTCACTTTCTTCGACG
GATACACGTATATTTTAGCGACGTGCACGGCCTCTCCAAGGCCTGACCAC
ATCGTCTGGGTCGCCATGTACGTCGGCATTTCAATGGCCGGACTCTTCGT
CCCCGTCGTGTACGTCTGGACAAAGCGCGAATTCTCCGACGCGGCTGCAT
CCGCTGCTGCATCTGCAGCGGCTTCCCCCCGATCGGCCAGTTCGGAAATA
GTCACTGCCGATCCCAACGCCAATGGCGCCGATACCTCTGAGAAACCGAA
CCTCGACGACGATGATACTCAAAAACCCACCCAGCAACACAAGCACGTCG
CTCGTCCCGAGAACCGTCTCTGGTTCGCCATGCTCGGTGCCCCCGCCATT
CCCATTGGGTTATTCTGGATGGGATGGACTGACTACAGCTCAATTTCAAT
CTGGTCCCCCATCATCGCATCCACCGTCTTCGGCTTCGGCACCATCTGCG
TCTTCATCTCCTCGTACATGTACGTCATCGACGCATACGACATCTACGCC
GCCTCTGCGCTGGGCTTCATGACGGTATCGCGCTACTGTGCGGCAGGCGG
GATGACGGTCGTGGGGATCCCGTTTTATAGTAATATGGGGGTGCATTGGA
CGTTGACGATCTTGGGGGCGATTAGTGCGTTGATGACTCCTGTGCCGTAT
GTGTTTTATCGCTATGGAGTGGTGATTCGGGGGTGGAGTCGGTATGCGGT
TTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005614CBS51388_005614Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005614-T1.exon1CBS51388_005614-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_005614-T1.exon2CBS51388_005614-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005614-T1.cdsCBS51388_005614-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005614-T1CBS51388_005614-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:2043025..2044839 +
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