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CBS51388_005623-T1, CBS51388_005623-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_005623-T1
Unique NameCBS51388_005623-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An08:2076663..2078070-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_005623-T1 ID=CBS51388_005623-T1|Name=CBS51388_005623-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1408bp|location=Sequence derived from alignment at An08:2076663..2078070- (Aspergillus niger CBS 513.88)
ATGGGCCAAATAGAAGAACTCCCCGACGACTACGATGAGTCGCTCGAAGT
CAACAAGCAGCCTCAACCCCCCGCGACCGAATCCAAAGATGAATTCACCC
CACCTCCCCCGGAGGAGCTCCCCATTCCCATCAAGGAAGAGCGCCTCAAA
GACCTGAATGCGGGCGCGGACCCCATGGCGCCTCAAATGCCGCCTGCCAT
GGAGGCTGTGAGCACCCACACGACAGATGAGCTGGCGGAGATTCTGAATC
GCACGCCGCTGTTCATGACGGATATTAACAAGGCGTATGATGAGAGTTAG
TTTTCCTCTTTTAGTCTAGTCCTGGAAATATCTAGGTAGAATGTATGGGC
TAACAGGGTATGTGGGTAGAGGGCGAAAACCCCATGCTTGATGCGATCCG
CGCCCTCCAGAACGAAGGTACCCGCGGCGATGTCGCGCAGAATTTCCGTG
AACAAGGAAACGAAGCTGCTCGGGAGAAGCGCTGGGTTGACGCGAAGGAG
CATTACTCGAAGGGTATTGCCGTCTTGCTGGCCAAGGAGGATAAGTGGGA
TAAGCCTGAGGATGAGAAGGAGGAGGCCCGGTTGCGGAGGGAGGCCGAGG
AGGCGTGCTATATCAATCGCGCGCTGTGCCATTTGGAGTTGAGTATGTGT
TTTCTTGTCCTGAAGTGAGGAAAAGGTTGCTAACGTGGATAGAAAACTAC
CGATCTACGACCCTCGACTGCGCAGCCGTGCTGAAGCTGAACCCCAAGAA
CGTGAAAGCATACTATCGGTCCGCTATGGCGCTGTTTTCGCTAGATAAGA
TTATCGAGGCGGAGGATGTGGCGACCCGGGGATTGAAACTGGATCCGGCC
AACAAGGCTCTTCAAATGGTTGCTGGAAAGATCGGCGAGCGCAAGGCTGT
GATTGAGCGTATCGCGGCTAGAAAGAAGGCCGAGGATGAGCGCACACGCA
AGGAGAAGACGCTGCTTAGCGTTGCGCTGAAGGCGCGCCAGATCCGTACG
CGCAAGACGGATCAGCCTCCTGAGATGGAGGACGTGGGCATCAAACTTTC
GCCCGATCCGCTGTCGCCCGAGAGTACGCTTGAGTTCCCGGCTGTGTTCC
TGTACCATATGGATGCGCAGACGGATTTCATCAAGGCATTCTCCGAAATG
CATTCGATCGAGGATCATCTCGACTATATGTTCCCGTTGCCGTGGGATGA
GAAGGGAGAGTACAAGATCAATACGGTGGAGTGCTTCATGGAGACGGTTA
CCGGAGGTTTGATCCGCGCTGGCAAGAAGGTACCATTAGTACAGATTCTG
AGTGGAGGAAAGGTTGAGGTTGTGGATGAGTTGGTGAAGATTTACATCGT
GCCGACCAGCAAGAGCGCTAAGTTTATTGCTGAGATGAAGGCGCGCAAGG
AGGCTTGA
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Coding sequence (CDS) from alignment at An08:2076663..2078070-

>CBS51388_005623-T1 ID=CBS51388_005623-T1|Name=CBS51388_005623-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3852bp|location=Sequence derived from alignment at An08:2076663..2078070- (Aspergillus niger CBS 513.88)
AAAACTACCGATCTACGACCCTCGACTGCGCAGCCGTGCTGAAGCTGAAC
CCCAAGAACGTGAAAGCATACTATCGGTCCGCTATGGCGCTGTTTTCGCT
AGATAAGATTATCGAGGCGGAGGATGTGGCGACCCGGGGATTGAAACTGG
ATCCGGCCAACAAGGCTCTTCAAATGGTTGCTGGAAAGATCGGCGAGCGC
AAGGCTGTGATTGAGCGTATCGCGGCTAGAAAGAAGGCCGAGGATGAGCG
CACACGCAAGGAGAAGACGCTGCTTAGCGTTGCGCTGAAGGCGCGCCAGA
TCCGTACGCGCAAGACGGATCAGCCTCCTGAGATGGAGGACGTGGGCATC
AAACTTTCGCCCGATCCGCTGTCGCCCGAGAGTACGCTTGAGTTCCCGGC
TGTGTTCCTGTACCATATGGATGCGCAGACGGATTTCATCAAGGCATTCT
CCGAAATGCATTCGATCGAGGATCATCTCGACTATATGTTCCCGTTGCCG
TGGGATGAGAAGGGAGAGTACAAGATCAATACGGTGGAGTGCTTCATGGA
GACGGTTACCGGAGGTTTGATCCGCGCTGGCAAGAAGGTACCATTAGTAC
AGATTCTGAGTGGAGGAAAGGTTGAGGTTGTGGATGAGTTGGTGAAGATT
TACATCGTGCCGACCAGCAAGAGCGCTAAGTTTATTGCTGAGATGAAGGC
GCGCAAGGAGGCTTGAAGGGCGAAAACCCCATGCTTGATGCGATCCGCGC
CCTCCAGAACGAAGGTACCCGCGGCGATGTCGCGCAGAATTTCCGTGAAC
AAGGAAACGAAGCTGCTCGGGAGAAGCGCTGGGTTGACGCGAAGGAGCAT
TACTCGAAGGGTATTGCCGTCTTGCTGGCCAAGGAGGATAAGTGGGATAA
GCCTGAGGATGAGAAGGAGGAGGCCCGGTTGCGGAGGGAGGCCGAGGAGG
CGTGCTATATCAATCGCGCGCTGTGCCATTTGGAGTTGAATGGGCCAAAT
AGAAGAACTCCCCGACGACTACGATGAGTCGCTCGAAGTCAACAAGCAGC
CTCAACCCCCCGCGACCGAATCCAAAGATGAATTCACCCCACCTCCCCCG
GAGGAGCTCCCCATTCCCATCAAGGAAGAGCGCCTCAAAGACCTGAATGC
GGGCGCGGACCCCATGGCGCCTCAAATGCCGCCTGCCATGGAGGCTGTGA
GCACCCACACGACAGATGAGCTGGCGGAGATTCTGAATCGCACGCCGCTG
TTCATGACGGATATTAACAAGGCGTATGATGAGAAAAACTACCGATCTAC
GACCCTCGACTGCGCAGCCGTGCTGAAGCTGAACCCCAAGAACGTGAAAG
CATACTATCGGTCCGCTATGGCGCTGTTTTCGCTAGATAAGATTATCGAG
GCGGAGGATGTGGCGACCCGGGGATTGAAACTGGATCCGGCCAACAAGGC
TCTTCAAATGGTTGCTGGAAAGATCGGCGAGCGCAAGGCTGTGATTGAGC
GTATCGCGGCTAGAAAGAAGGCCGAGGATGAGCGCACACGCAAGGAGAAG
ACGCTGCTTAGCGTTGCGCTGAAGGCGCGCCAGATCCGTACGCGCAAGAC
GGATCAGCCTCCTGAGATGGAGGACGTGGGCATCAAACTTTCGCCCGATC
CGCTGTCGCCCGAGAGTACGCTTGAGTTCCCGGCTGTGTTCCTGTACCAT
ATGGATGCGCAGACGGATTTCATCAAGGCATTCTCCGAAATGCATTCGAT
CGAGGATCATCTCGACTATATGTTCCCGTTGCCGTGGGATGAGAAGGGAG
AGTACAAGATCAATACGGTGGAGTGCTTCATGGAGACGGTTACCGGAGGT
TTGATCCGCGCTGGCAAGAAGGTACCATTAGTACAGATTCTGAGTGGAGG
AAAGGTTGAGGTTGTGGATGAGTTGGTGAAGATTTACATCGTGCCGACCA
GCAAGAGCGCTAAGTTTATTGCTGAGATGAAGGCGCGCAAGGAGGCTTGA
AGGGCGAAAACCCCATGCTTGATGCGATCCGCGCCCTCCAGAACGAAGGT
ACCCGCGGCGATGTCGCGCAGAATTTCCGTGAACAAGGAAACGAAGCTGC
TCGGGAGAAGCGCTGGGTTGACGCGAAGGAGCATTACTCGAAGGGTATTG
CCGTCTTGCTGGCCAAGGAGGATAAGTGGGATAAGCCTGAGGATGAGAAG
GAGGAGGCCCGGTTGCGGAGGGAGGCCGAGGAGGCGTGCTATATCAATCG
CGCGCTGTGCCATTTGGAGTTGAATGGGCCAAATAGAAGAACTCCCCGAC
GACTACGATGAGTCGCTCGAAGTCAACAAGCAGCCTCAACCCCCCGCGAC
CGAATCCAAAGATGAATTCACCCCACCTCCCCCGGAGGAGCTCCCCATTC
CCATCAAGGAAGAGCGCCTCAAAGACCTGAATGCGGGCGCGGACCCCATG
GCGCCTCAAATGCCGCCTGCCATGGAGGCTGTGAGCACCCACACGACAGA
TGAGCTGGCGGAGATTCTGAATCGCACGCCGCTGTTCATGACGGATATTA
ACAAGGCGTATGATGAGAAAAACTACCGATCTACGACCCTCGACTGCGCA
GCCGTGCTGAAGCTGAACCCCAAGAACGTGAAAGCATACTATCGGTCCGC
TATGGCGCTGTTTTCGCTAGATAAGATTATCGAGGCGGAGGATGTGGCGA
CCCGGGGATTGAAACTGGATCCGGCCAACAAGGCTCTTCAAATGGTTGCT
GGAAAGATCGGCGAGCGCAAGGCTGTGATTGAGCGTATCGCGGCTAGAAA
GAAGGCCGAGGATGAGCGCACACGCAAGGAGAAGACGCTGCTTAGCGTTG
CGCTGAAGGCGCGCCAGATCCGTACGCGCAAGACGGATCAGCCTCCTGAG
ATGGAGGACGTGGGCATCAAACTTTCGCCCGATCCGCTGTCGCCCGAGAG
TACGCTTGAGTTCCCGGCTGTGTTCCTGTACCATATGGATGCGCAGACGG
ATTTCATCAAGGCATTCTCCGAAATGCATTCGATCGAGGATCATCTCGAC
TATATGTTCCCGTTGCCGTGGGATGAGAAGGGAGAGTACAAGATCAATAC
GGTGGAGTGCTTCATGGAGACGGTTACCGGAGGTTTGATCCGCGCTGGCA
AGAAGGTACCATTAGTACAGATTCTGAGTGGAGGAAAGGTTGAGGTTGTG
GATGAGTTGGTGAAGATTTACATCGTGCCGACCAGCAAGAGCGCTAAGTT
TATTGCTGAGATGAAGGCGCGCAAGGAGGCTTGAAGGGCGAAAACCCCAT
GCTTGATGCGATCCGCGCCCTCCAGAACGAAGGTACCCGCGGCGATGTCG
CGCAGAATTTCCGTGAACAAGGAAACGAAGCTGCTCGGGAGAAGCGCTGG
GTTGACGCGAAGGAGCATTACTCGAAGGGTATTGCCGTCTTGCTGGCCAA
GGAGGATAAGTGGGATAAGCCTGAGGATGAGAAGGAGGAGGCCCGGTTGC
GGAGGGAGGCCGAGGAGGCGTGCTATATCAATCGCGCGCTGTGCCATTTG
GAGTTGAATGGGCCAAATAGAAGAACTCCCCGACGACTACGATGAGTCGC
TCGAAGTCAACAAGCAGCCTCAACCCCCCGCGACCGAATCCAAAGATGAA
TTCACCCCACCTCCCCCGGAGGAGCTCCCCATTCCCATCAAGGAAGAGCG
CCTCAAAGACCTGAATGCGGGCGCGGACCCCATGGCGCCTCAAATGCCGC
CTGCCATGGAGGCTGTGAGCACCCACACGACAGATGAGCTGGCGGAGATT
CTGAATCGCACGCCGCTGTTCATGACGGATATTAACAAGGCGTATGATGA
GA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_005623CBS51388_005623Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005623-T1CBS51388_005623-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005623-T1.cdsCBS51388_005623-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_005623-T1.exon3CBS51388_005623-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_005623-T1.exon2CBS51388_005623-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_005623-T1.exon1CBS51388_005623-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR013026
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR019734
DBxrefPFAM:PF18972
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An08supercontigAn08:2076663..2078070 -
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