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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:2107588..2109290+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005635-T1 ID=CBS51388_005635-T1|Name=CBS51388_005635-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1703bp|location=Sequence derived from alignment at An08:2107588..2109290+ (Aspergillus niger CBS 513.88)
ATGGTCCATCTTGCTCAGGTTAAGCGCGACAGTGATGTCGAGAAGACCGC
TCAACAGGTCGGCTCCATCCAGCTGGACTCTGCTGAGGACGATGCCTTTT
ACTCCAGCGTCTACGGCACTCGTTTTGCTACGGAGCAGCTCCCCTCGACT
GAGATGCCGGAGCGGGAGATGCCCCGTGAGGTGGCCTACCGTATGATCAA
GGATGAGCTCAGTCTGGATGGTAACCCCATGCTCAAGTAGGTTCTGTGGA
TAGCAAGACATGTGCAGATGCTGATTTCTTGACAGCCTTGCGAGTTTCGT
GACAACCTACATGGTAAGTGTCCTTTTTCTAAGAATTCCAGGCCAATGCT
AATTCGAGTAGGAAGAGGAAGTTGAGAAGCTCATGACCGAGTCCTTCAGC
AAGAACTTCATCGACTACGAGGAATACCCCCAATCCGCTGAGATCCAGAA
CCGCTGTGTGAACATGATCGCCCGTCTGTTCAACGCTCCCACCGACAGTG
ATGACGAACACCCCATGGGTACCTCTACCATCGGTTCATCCGAGGCCATC
ATGCTGGGCACCTTGGCCATGAAGAGACGGTGGCAGAACAAGCGCAGGGC
GGAGGGCAAGGATGCCTCCAAGCCCAACATTGTCATGAACAGTGCCGTCC
AGGTGTGCTGGGAGAAGGCCGCCCGCTACTTCGATGTTGAGGAGCGCTAC
GTCTACTGCACGGAAGACCGCTACGTCATTGATCCCAAGCAGGCCGTGGA
CCTGGTGGACGAGAACACCATTGGTATCTGTGCCATCCTGGGCACCACCT
ACACCGGTGAGTACGAGGACGTCAAGGCCATCAACGACCTCCTTGTCGAG
CGGGGCATTGACTGCCCCATCCACGTCGATGCCGCCAGTGGTGGTTTCGT
CGCTCCCTTCGTTGCCCCCAACCTGGAGTGGGACTTCCGTCTGTCCAAGG
TGGTGTCCATCAACGTGTCTGGTCACAAGTACGGGTTGGTGTACCCCGGT
GTTGGTTGGGTTGTCTGGCGCTCGCCCGAGTACCTGCCCAAGGAGCTGAT
CTTCAACATCAACTACCTGGGAGCCGAGCAGGCCAGCTTCACGCTGAACT
TCTCCAAGGGCGCGTCGCAGGTCATTGGACAGTACTACCAGATGATCCGA
CTGGGCAAGCGGGGCTACCGGTCGATCATGACGAACATCACACGCACTGC
CGACTACTTAGCCGACCAGCTGGAGCAGCTGGGCTTTGTGATCATGAGCG
AGCGTCGCGGCAAGGGCCTGCCGCTGGTGGCGTTCCGGCTGCCGGCGGAC
CGCGACTCGGAGCAGTTTGACGAGTTTGCGCTGGCGCACCAGCTGCGTGA
GCGTGGGTGGATCGTCCCGGCCTACACGATGGCGCCCAACAGCAACTCGC
TGAAGCTGATGCGGGTGGTGGTGCGCGAGGACTTTAGCAAGAACCGGTGC
GATGCGCTGCTGGCGGACATTAAGCTGGCCTTGAAGACGCTCAGCGACAT
GGACAAGGCGATGTTGGAGCGGTACACTCAGTAAGTTCCCCTGGATGAGA
ATTGTGCCAACTACTTGAGTGGAGGCTAACGGAAGTAGTCATGTCCGGGT
GCACTCGACCAACTCGCACAAGTCTAAGCATGTGCACCCTCACTACAAGA
ACGAGAGCCATTCCTTGCAGGGCAAGCATGGCAAGACCCACGGTGTGTGT
TAA back to topCoding sequence (CDS) from alignment at An08:2107588..2109290+ >CBS51388_005635-T1 ID=CBS51388_005635-T1|Name=CBS51388_005635-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6192bp|location=Sequence derived from alignment at An08:2107588..2109290+ (Aspergillus niger CBS 513.88)
ATGGTCCATCTTGCTCAGGTTAAGCGCGACAGTGATGTCGAGAAGACCGC
TCAACAGGTCGGCTCCATCCAGCTGGACTCTGCTGAGGACGATGCCTTTT
ACTCCAGCGTCTACGGCACTCGTTTTGCTACGGAGCAGCTCCCCTCGACT
GAGATGCCGGAGCGGGAGATGCCCCGTGAGGTGGCCTACCGTATGATCAA
GGATGAGCTCAGTCTGGATGGTAACCCCATGCTCAACCTTGCGAGTTTCG
TGACAACCTACATGGAAGAGGAAGTTGAGAAGCTCATGACCGAGTCCTTC
AGCAAGAACTTCATCGACTACGAGGAATACCCCCAATCCGCTGAGATCCA
GAACCGCTGTGTGAACATGATCGCCCGTCTGTTCAACGCTCCCACCGACA
GTGATGACGAACACCCCATGGGTACCTCTACCATCGGTTCATCCGAGGCC
ATCATGCTGGGCACCTTGGCCATGAAGAGACGGTGGCAGAACAAGCGCAG
GGCGGAGGGCAAGGATGCCTCCAAGCCCAACATTGTCATGAACAGTGCCG
TCCAGGTGTGCTGGGAGAAGGCCGCCCGCTACTTCGATGTTGAGGAGCGC
TACGTCTACTGCACGGAAGACCGCTACGTCATTGATCCCAAGCAGGCCGT
GGACCTGGTGGACGAGAACACCATTGGTATCTGTGCCATCCTGGGCACCA
CCTACACCGGTGAGTACGAGGACGTCAAGGCCATCAACGACCTCCTTGTC
GAGCGGGGCATTGACTGCCCCATCCACGTCGATGCCGCCAGTGGTGGTTT
CGTCGCTCCCTTCGTTGCCCCCAACCTGGAGTGGGACTTCCGTCTGTCCA
AGGTGGTGTCCATCAACGTGTCTGGTCACAAGTACGGGTTGGTGTACCCC
GGTGTTGGTTGGGTTGTCTGGCGCTCGCCCGAGTACCTGCCCAAGGAGCT
GATCTTCAACATCAACTACCTGGGAGCCGAGCAGGCCAGCTTCACGCTGA
ACTTCTCCAAGGGCGCGTCGCAGGTCATTGGACAGTACTACCAGATGATC
CGACTGGGCAAGCGGGGCTACCGGTCGATCATGACGAACATCACACGCAC
TGCCGACTACTTAGCCGACCAGCTGGAGCAGCTGGGCTTTGTGATCATGA
GCGAGCGTCGCGGCAAGGGCCTGCCGCTGGTGGCGTTCCGGCTGCCGGCG
GACCGCGACTCGGAGCAGTTTGACGAGTTTGCGCTGGCGCACCAGCTGCG
TGAGCGTGGGTGGATCGTCCCGGCCTACACGATGGCGCCCAACAGCAACT
CGCTGAAGCTGATGCGGGTGGTGGTGCGCGAGGACTTTAGCAAGAACCGG
TGCGATGCGCTGCTGGCGGACATTAAGCTGGCCTTGAAGACGCTCAGCGA
CATGGACAAGGCGATGTTGGAGCGGTACACTCATCATGTCCGGGTGCACT
CGACCAACTCGCACAAGTCTAAGCATGTGCACCCTCACTACAAGAACGAG
AGCCATTCCTTGCAGGGCAAGCATGGCAAGACCCACGGTGTGTGTTAAAT
GGTCCATCTTGCTCAGGTTAAGCGCGACAGTGATGTCGAGAAGACCGCTC
AACAGGTCGGCTCCATCCAGCTGGACTCTGCTGAGGACGATGCCTTTTAC
TCCAGCGTCTACGGCACTCGTTTTGCTACGGAGCAGCTCCCCTCGACTGA
GATGCCGGAGCGGGAGATGCCCCGTGAGGTGGCCTACCGTATGATCAAGG
ATGAGCTCAGTCTGGATGGTAACCCCATGCTCAACCTTGCGAGTTTCGTG
ACAACCTACATGGAAGAGGAAGTTGAGAAGCTCATGACCGAGTCCTTCAG
CAAGAACTTCATCGACTACGAGGAATACCCCCAATCCGCTGAGATCCAGA
ACCGCTGTGTGAACATGATCGCCCGTCTGTTCAACGCTCCCACCGACAGT
GATGACGAACACCCCATGGGTACCTCTACCATCGGTTCATCCGAGGCCAT
CATGCTGGGCACCTTGGCCATGAAGAGACGGTGGCAGAACAAGCGCAGGG
CGGAGGGCAAGGATGCCTCCAAGCCCAACATTGTCATGAACAGTGCCGTC
CAGGTGTGCTGGGAGAAGGCCGCCCGCTACTTCGATGTTGAGGAGCGCTA
CGTCTACTGCACGGAAGACCGCTACGTCATTGATCCCAAGCAGGCCGTGG
ACCTGGTGGACGAGAACACCATTGGTATCTGTGCCATCCTGGGCACCACC
TACACCGGTGAGTACGAGGACGTCAAGGCCATCAACGACCTCCTTGTCGA
GCGGGGCATTGACTGCCCCATCCACGTCGATGCCGCCAGTGGTGGTTTCG
TCGCTCCCTTCGTTGCCCCCAACCTGGAGTGGGACTTCCGTCTGTCCAAG
GTGGTGTCCATCAACGTGTCTGGTCACAAGTACGGGTTGGTGTACCCCGG
TGTTGGTTGGGTTGTCTGGCGCTCGCCCGAGTACCTGCCCAAGGAGCTGA
TCTTCAACATCAACTACCTGGGAGCCGAGCAGGCCAGCTTCACGCTGAAC
TTCTCCAAGGGCGCGTCGCAGGTCATTGGACAGTACTACCAGATGATCCG
ACTGGGCAAGCGGGGCTACCGGTCGATCATGACGAACATCACACGCACTG
CCGACTACTTAGCCGACCAGCTGGAGCAGCTGGGCTTTGTGATCATGAGC
GAGCGTCGCGGCAAGGGCCTGCCGCTGGTGGCGTTCCGGCTGCCGGCGGA
CCGCGACTCGGAGCAGTTTGACGAGTTTGCGCTGGCGCACCAGCTGCGTG
AGCGTGGGTGGATCGTCCCGGCCTACACGATGGCGCCCAACAGCAACTCG
CTGAAGCTGATGCGGGTGGTGGTGCGCGAGGACTTTAGCAAGAACCGGTG
CGATGCGCTGCTGGCGGACATTAAGCTGGCCTTGAAGACGCTCAGCGACA
TGGACAAGGCGATGTTGGAGCGGTACACTCATCATGTCCGGGTGCACTCG
ACCAACTCGCACAAGTCTAAGCATGTGCACCCTCACTACAAGAACGAGAG
CCATTCCTTGCAGGGCAAGCATGGCAAGACCCACGGTGTGTGTTAAATGG
TCCATCTTGCTCAGGTTAAGCGCGACAGTGATGTCGAGAAGACCGCTCAA
CAGGTCGGCTCCATCCAGCTGGACTCTGCTGAGGACGATGCCTTTTACTC
CAGCGTCTACGGCACTCGTTTTGCTACGGAGCAGCTCCCCTCGACTGAGA
TGCCGGAGCGGGAGATGCCCCGTGAGGTGGCCTACCGTATGATCAAGGAT
GAGCTCAGTCTGGATGGTAACCCCATGCTCAACCTTGCGAGTTTCGTGAC
AACCTACATGGAAGAGGAAGTTGAGAAGCTCATGACCGAGTCCTTCAGCA
AGAACTTCATCGACTACGAGGAATACCCCCAATCCGCTGAGATCCAGAAC
CGCTGTGTGAACATGATCGCCCGTCTGTTCAACGCTCCCACCGACAGTGA
TGACGAACACCCCATGGGTACCTCTACCATCGGTTCATCCGAGGCCATCA
TGCTGGGCACCTTGGCCATGAAGAGACGGTGGCAGAACAAGCGCAGGGCG
GAGGGCAAGGATGCCTCCAAGCCCAACATTGTCATGAACAGTGCCGTCCA
GGTGTGCTGGGAGAAGGCCGCCCGCTACTTCGATGTTGAGGAGCGCTACG
TCTACTGCACGGAAGACCGCTACGTCATTGATCCCAAGCAGGCCGTGGAC
CTGGTGGACGAGAACACCATTGGTATCTGTGCCATCCTGGGCACCACCTA
CACCGGTGAGTACGAGGACGTCAAGGCCATCAACGACCTCCTTGTCGAGC
GGGGCATTGACTGCCCCATCCACGTCGATGCCGCCAGTGGTGGTTTCGTC
GCTCCCTTCGTTGCCCCCAACCTGGAGTGGGACTTCCGTCTGTCCAAGGT
GGTGTCCATCAACGTGTCTGGTCACAAGTACGGGTTGGTGTACCCCGGTG
TTGGTTGGGTTGTCTGGCGCTCGCCCGAGTACCTGCCCAAGGAGCTGATC
TTCAACATCAACTACCTGGGAGCCGAGCAGGCCAGCTTCACGCTGAACTT
CTCCAAGGGCGCGTCGCAGGTCATTGGACAGTACTACCAGATGATCCGAC
TGGGCAAGCGGGGCTACCGGTCGATCATGACGAACATCACACGCACTGCC
GACTACTTAGCCGACCAGCTGGAGCAGCTGGGCTTTGTGATCATGAGCGA
GCGTCGCGGCAAGGGCCTGCCGCTGGTGGCGTTCCGGCTGCCGGCGGACC
GCGACTCGGAGCAGTTTGACGAGTTTGCGCTGGCGCACCAGCTGCGTGAG
CGTGGGTGGATCGTCCCGGCCTACACGATGGCGCCCAACAGCAACTCGCT
GAAGCTGATGCGGGTGGTGGTGCGCGAGGACTTTAGCAAGAACCGGTGCG
ATGCGCTGCTGGCGGACATTAAGCTGGCCTTGAAGACGCTCAGCGACATG
GACAAGGCGATGTTGGAGCGGTACACTCATCATGTCCGGGTGCACTCGAC
CAACTCGCACAAGTCTAAGCATGTGCACCCTCACTACAAGAACGAGAGCC
ATTCCTTGCAGGGCAAGCATGGCAAGACCCACGGTGTGTGTTAAATGGTC
CATCTTGCTCAGGTTAAGCGCGACAGTGATGTCGAGAAGACCGCTCAACA
GGTCGGCTCCATCCAGCTGGACTCTGCTGAGGACGATGCCTTTTACTCCA
GCGTCTACGGCACTCGTTTTGCTACGGAGCAGCTCCCCTCGACTGAGATG
CCGGAGCGGGAGATGCCCCGTGAGGTGGCCTACCGTATGATCAAGGATGA
GCTCAGTCTGGATGGTAACCCCATGCTCAACCTTGCGAGTTTCGTGACAA
CCTACATGGAAGAGGAAGTTGAGAAGCTCATGACCGAGTCCTTCAGCAAG
AACTTCATCGACTACGAGGAATACCCCCAATCCGCTGAGATCCAGAACCG
CTGTGTGAACATGATCGCCCGTCTGTTCAACGCTCCCACCGACAGTGATG
ACGAACACCCCATGGGTACCTCTACCATCGGTTCATCCGAGGCCATCATG
CTGGGCACCTTGGCCATGAAGAGACGGTGGCAGAACAAGCGCAGGGCGGA
GGGCAAGGATGCCTCCAAGCCCAACATTGTCATGAACAGTGCCGTCCAGG
TGTGCTGGGAGAAGGCCGCCCGCTACTTCGATGTTGAGGAGCGCTACGTC
TACTGCACGGAAGACCGCTACGTCATTGATCCCAAGCAGGCCGTGGACCT
GGTGGACGAGAACACCATTGGTATCTGTGCCATCCTGGGCACCACCTACA
CCGGTGAGTACGAGGACGTCAAGGCCATCAACGACCTCCTTGTCGAGCGG
GGCATTGACTGCCCCATCCACGTCGATGCCGCCAGTGGTGGTTTCGTCGC
TCCCTTCGTTGCCCCCAACCTGGAGTGGGACTTCCGTCTGTCCAAGGTGG
TGTCCATCAACGTGTCTGGTCACAAGTACGGGTTGGTGTACCCCGGTGTT
GGTTGGGTTGTCTGGCGCTCGCCCGAGTACCTGCCCAAGGAGCTGATCTT
CAACATCAACTACCTGGGAGCCGAGCAGGCCAGCTTCACGCTGAACTTCT
CCAAGGGCGCGTCGCAGGTCATTGGACAGTACTACCAGATGATCCGACTG
GGCAAGCGGGGCTACCGGTCGATCATGACGAACATCACACGCACTGCCGA
CTACTTAGCCGACCAGCTGGAGCAGCTGGGCTTTGTGATCATGAGCGAGC
GTCGCGGCAAGGGCCTGCCGCTGGTGGCGTTCCGGCTGCCGGCGGACCGC
GACTCGGAGCAGTTTGACGAGTTTGCGCTGGCGCACCAGCTGCGTGAGCG
TGGGTGGATCGTCCCGGCCTACACGATGGCGCCCAACAGCAACTCGCTGA
AGCTGATGCGGGTGGTGGTGCGCGAGGACTTTAGCAAGAACCGGTGCGAT
GCGCTGCTGGCGGACATTAAGCTGGCCTTGAAGACGCTCAGCGACATGGA
CAAGGCGATGTTGGAGCGGTACACTCATCATGTCCGGGTGCACTCGACCA
ACTCGCACAAGTCTAAGCATGTGCACCCTCACTACAAGAACGAGAGCCAT
TCCTTGCAGGGCAAGCATGGCAAGACCCACGGTGTGTGTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006536 | glutamate metabolic process |
| GO:0019752 | carboxylic acid metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004351 | glutamate decarboxylase activity |
| GO:0003824 | catalytic activity |
| GO:0016831 | carboxy-lyase activity |
| GO:0030170 | pyridoxal phosphate binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR015424 |
| DBxref | InterPro:IPR010107 |
| DBxref | InterPro:IPR015421 |
| DBxref | InterPro:IPR002129 |
| DBxref | PFAM:PF00282 |
| DBxref | PFAM:PF00266 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:2107588..2109290 + |
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